Rhinichthys klamathensis goyatoka (western speckled dace): 130083388
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Entry
130083388 CDS
T09701
Symbol
scrib
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
130083388 (scrib)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
LRR_14
LRR_8
PDZ_6
LRR_4
PDZ_2
LRR_1
LRR_9
LRR_LRWD1
LRR_13
Motif
Other DBs
NCBI-GeneID:
130083388
NCBI-ProteinID:
XP_056104371
LinkDB
All DBs
Position
Unknown
AA seq
2047 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCSLTAVPDEIYRYNRSLEELLLDANQLRELPKPFFKLHN
LRKLGLSDNEIQKLPPEVANFTQLVELDISRNDISEIPENIKLCQALEIADFSGNPLTRL
PDGFTQLRGLAHLSLNDVSLQSLPNDIGNLSNLVTLELRENLLKSLPSSLSFLVKLEQLD
LGSNVLEVLPDTLGALPNLRELWLDRNQLSSLPPELGNLRQLVCLDVSENRLSELPTEIS
GLIALTDLLLSENVLEVLPDSIGSLKKLSILKVNQNRLVHLTDSLGECENLTELMLTENL
LQSLPRSLGKLKKLTNLNVDRNRLSSVPAELGGCVSLNVLSLRDNRLGKLPAELANATEL
HVLDVAGNRLQNLPFALANLNLKAMWLAENQSQPMLKFQTEDDEQTGEKVLTCYLLPQQP
SSSLENLLDRSVDETWPTDTNLNRVSVIQFRDDSKHEEEDEETAAERRQGLQRRATPHPS
ELKVMKNVIEARRNEAYTAKPDEGLESPDSEEKRLSGLSNQSHDSQASSSTASATSQDEK
RGINSTGMELNDGQCREEEELDEMEVEYSEPTVHFAEEPIIRCGDDEEDENEEDDAERSY
EDSRTPPLPAEKQRLIRKDTPHYKKHFKITKLPKPETVAALLQGFSHDGLSPTAHTPEDE
RDDDVEEEDEEDEGGVIVNTPFQHRLETAELEDSRLSQMNSSLQPVKGVSFDQVNNLLIE
PARIEEEELNLSILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVAEEGPAARAGVKVGD
KLLEVNGVDLHGAEHHTAVEALRNSGAAVVMTVLRERMVEPENAITTTPLRPEDDYFPRE
RRSSGLPFLLDPASPAVSTGPSQRLATCLIRNDKGLGFSIAGGKGSTPYRVGDTGIFISR
IAEGGAAHRDTVLHVGDRVISINGVDMTEARHDQAVALLTGTSPTITLLVDRDQASAGGA
SPRTRPHSPPPPEPSDSPEQEEGGDEHLGNHLNCPMEDEYPIEEVMLFKAGGPLGLSIVG
GSDHASHPFGINEPGVFISKVIPNGLASQSGLRVGDRILEVNAIDLRHATHQEAVRALLS
NKQEIRMLVRRDPSPPGMEEIVIHKQPGEKLGISIRGGAKGHAGNPFDPTDEGIFISKVS
TSGAAARDDRLRVGMRILEVGNNSLLGMTHTEAVRVLRASGDSLVMLVCDGFDPRNATGI
EASPGVIANPFAAGIVRKNSMESISSVDRDLSPEEIDIMQKEVEMVRETSQWEREEMEKV
ERMRLEREEATRLLEEETENLSTGPLKLDYKTLAALPMTSLQKVNRFSPSFAAFVTMEAA
MPAGPVDPLGFEKVHASMYHVEPIALPSSPVCTAASSTALKQPQADTWDPLPALGVPQET
NQEEECFVDSQPICFSENPFLVANRKGKGCPPEERILSGPPVGYGRHGQLQPWLYSKGSP
SELLRIDSPVRDAAHSPHNSQQSHKSSSAMLGREVRYSNIQFPSNANTKDNSSSTKPGAI
QPLSRVRPAVSPASQDGHSSPNPFQHGLSPISSQTTPRAPSPDTHEEYPINIKQVYKAFA
AVPHSLAVLEPPQDLYAPRNNVSAKQPSPEPVLNNEVFMDEGDGEGSGPLSSRLSLSSDR
REYRSLAAVPRLSRPSMESKTPPSFGRDSPEQRSFRDRQKYFEIDVKQQTPDKPKPRISL
VGEEDLKKMKEEEAKRIEQSAQEYMLDEDEEDEEEDLAKQVADMKAHGKVILDGVEYKVE
SLGSHSSPSPRQCATPPSYSATPPSHCGSSGPSSVDGKGDSQRNSMEDGFRLEQRPNSMT
GLIPVYPGESVAPIRTAKAERRQQDRLRMQSPELAVAMDKELSPAEKRALEAEKRAMWRA
ARPYGLEEDVRQYEQDLAKRLYQSRVRASLGSAATPPNSCSSSSCQPRMKSLEQDALKAQ
MVIAKSKEGKKRGTLDQLSESPSPAPTPSPTPMEDISPRAVTSPGRLSLSEKKFDYRQFA
AIPSSKPVYDIQSPGASDDVRFMDDASSNPDPEVPVATTSALEEMALYSNKRKLRQGRRS
LEAPVPT
NT seq
6144 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagtgtatcccgctgtggcggtgcaaccgtcacgttgagtctgtggataagcgg
cactgctcgctcactgcggtgcccgatgagatctaccgctacaaccgcagtctggaggag
ctgctcctggacgccaaccagctgagagagctgcctaagcctttcttcaaactgcacaat
ttgcgaaagctgggcctcagtgacaacgagattcaaaaattgccgcccgaagttgccaac
ttcacacagctggttgagttggacatctccagaaatgatatttctgagattcctgaaaac
attaaattatgtcaggccttggagattgcagacttcagcggaaaccccttgaccaggttg
cctgatggcttcacacagctcagaggactggctcacctatcactcaatgatgtgtcgctg
cagtctctacccaatgacataggaaacttgtcaaacctggtgactctagaactgagggag
aatctactgaaatctttaccctcctctctttccttcctggttaaactggaacagctggat
ctgggcagcaatgtactggaagttttgcctgacacacttggggcactgcccaatcttcgt
gagctatggttggacagaaaccagctctcctcactacctcctgagctgggaaacctgcgg
cagctggtttgcttggacgtgtcagaaaaccgtctttcagagcttcccacagagatcagc
ggccttattgccctcacagacctgctgctctccgagaacgttctcgaagtcttgccggac
agcattggctcacttaagaagttgtcaattctgaaagtgaaccagaaccgcttggtgcat
ctcacagactctcttggcgagtgtgagaacctgacagagctcatgctgactgagaacctt
ctccagtccctccctcgctcactcgggaagctgaagaagttgaccaacttgaatgtggac
cgaaaccgcttgagcagcgtcccagcagagctgggaggatgcgtcagcttgaacgtactc
tccctcagagataaccggttgggaaaactacccgctgagctcgccaacgccacagaatta
cacgtgctggatgtggcaggcaacaggttgcagaatttaccgtttgcattggccaatctg
aacctgaaggccatgtggctggcagagaaccagtctcagcccatgctgaaattccagaca
gaggatgatgagcagactggagaaaaagttctcacctgctacctgctgccccagcaaccc
tcatcaagcctcgagaatctgttggacaggagcgttgatgaaacctggcccacagacact
aatttgaacagggtatcagtcattcagttccgggatgactccaaacacgaagaggaagat
gaggagacagcggcagagaggaggcagggtcttcagaggagagccacaccacatcctagt
gagttaaaggtgatgaagaatgtcattgaagccagaagaaatgaggcttatacagccaaa
ccagatgagggtctggagtccccggactctgaggagaaacggttgagtgggctgtccaat
caaagtcatgattctcaggcatccagtagcaccgcctcggccacttctcaggacgagaag
cggggtataaacagtacagggatggagcttaatgatggacagtgtcgagaggaggaggag
ctggatgagatggaggtggagtattctgagcctactgtgcactttgctgaagagcccatc
attcgttgcggtgatgatgaggaagatgagaatgaagaagatgatgctgaaaggagctat
gaggactcccgaacgccacctttacctgccgagaaacagcggctcatacgtaaagacaca
ccacactacaaaaagcacttcaagatcaccaagttgcccaaacctgagactgtcgccgcc
ctgctgcaaggcttcagtcatgacggcctgtcacctactgctcacacccctgaggatgaa
agggatgatgatgtggaggaggaagatgaagaggacgagggaggagtaatagtcaatact
ccattccagcacagactagaaaccgctgagctagaagacagcaggctgagtcagatgaac
tcatccctgcagccagtgaagggggtgtcatttgatcaagtcaataatctgctgattgag
cctgctcgaattgaggaggaagagctgaacctgtccatcctgaggcagactggtgggtta
ggcatcagcatagcaggggggaaaggatctacgccctataagggtgacgatgagggtatt
ttcatctctagagtggcagaagagggccctgcagctcgtgctggggtcaaagtgggagac
aaacttcttgaggtgaacggagtagacctgcatggggcagagcatcacacagctgtcgag
gccttgcgtaactcgggggcagccgtggttatgaccgttctacgagagcgcatggtggaa
ccagagaacgccatcaccaccacaccattgcgaccagaagatgattatttcccccgggag
agacgttccagtgggctgcctttcctcctggaccctgcctcacctgctgttagcactgga
ccttcacagcgactagccacttgtctgatccgcaacgataaaggtttaggtttcagcatt
gctggagggaaagggtcaaccccgtaccgagtaggagacacgggaatcttcatctctcga
attgctgaaggaggagctgctcacagagacactgtcctgcacgtgggagacagggtcata
tcaatcaatggtgtagacatgacagaggccagacatgaccaggcagtagcgctgcttact
ggcacctcccccaccatcaccctcctggtcgatcgggaccaggccagtgcagggggcgcc
tcccctcgaactcgacctcattcaccccctcctccagagccatctgactcacctgagcaa
gaggaaggaggagacgagcaccttggaaaccatctcaactgtcccatggaagatgaatac
cccattgaggaagtgatgctgttcaaagcgggtggtcccctgggtttgagcattgtaggg
ggtagcgaccatgccagtcacccgtttggaattaatgagccaggggtgttcatctcaaag
gtcatccccaatggcttggcctctcagagtggacttcgtgtgggtgatcgtatcttggag
gtgaatgccatcgacctgcgacatgcaacacaccaggaagctgttagagcattgctctcc
aacaaacaggagatccgcatgcttgtgcgcagagatccctcgcctcccggcatggaggag
attgtcattcacaagcagcctggagaaaagctaggaatcagcatcaggggtggcgctaaa
ggccatgcaggaaacccctttgaccccacagatgagggcatcttcatttccaaggtgagc
accagtggtgccgctgcacgagatgaccgactgcgggtgggcatgcgcattcttgaggtg
ggcaacaacagtctgctgggtatgacccacacggaagcagtgagggtcttgcgtgcctcc
ggtgattccttggttatgcttgtgtgtgatggctttgacccaagaaacgctacgggcata
gaggcatcccctggtgttattgcaaacccgtttgcggccggtattgttcgtaagaacagt
atggagagcatctcgtcagtagacagagacctgagtcctgaagagattgacatcatgcag
aaggaggtagaaatggtaagagagacgtcccagtgggaacgggaggagatggaaaaagtg
gagcgaatgcgcttggagcgcgaggaggcaactcgcttgctggaggaggaaactgagaat
ttgagcactgggccattgaaactggactacaagacactggcggctctgcctatgactagt
ctacagaaagttaacagattttctccctcctttgctgcattcgtcacaatggaggctgcc
atgccagctggccccgtagatcccctgggttttgagaaagtccatgcctctatgtaccat
gtagagcccattgccctcccttcatctccagtctgcactgccgcaagttcaacggcttta
aaacagccccaagccgacacatgggacccactcccagctctaggagtgccacaagaaact
aaccaggaagaagaatgttttgtggactcccagccaatctgctttagtgaaaaccccttc
cttgtggctaatcgcaagggcaaaggctgccctcctgaggagcgcattttatcagggcca
cctgtgggttacggcaggcatgggcagctgcaaccctggttgtacagcaagggttcaccg
tcggagcttctcaggattgacagtcctgtccgagatgctgcacactctccacacaactcg
cagcagtcccacaaatcttcctctgcgatgcttggaagagaggttcgatattcaaacatt
cagttcccttcaaatgcaaacaccaaggataattcatcatcaactaaacctggtgccatc
cagccactctctagggtgcgacccgctgtgtctccagccagtcaggatggccacagcagt
cccaaccctttccagcatggcctctctcccatcagctctcagaccactcctcgtgcccca
tcccctgacacacatgaggaataccccatcaatatcaagcaggtatataaggccttcgca
gctgtgccacactccctggccgtactggaacccccacaggatctttacgctccacggaac
aatgtcagcgcaaagcaaccgtcaccagagcctgtgctgaataatgaggtgtttatggat
gagggtgatggtgagggcagtggtcctctcagctctcgtctctccctctcatctgaccgc
cgcgagtacaggagcctggcagccgtgccacgcctgtctcgcccctcaatggagtcgaag
actcccccctcttttggcagagatagtccagagcagcgctccttcagagacagacagaaa
tattttgagattgatgtgaagcagcagacaccagacaaacctaaacctcgcatctcactt
gtgggagaagaggacctgaagaaaatgaaagaggaagaagcaaagcgaattgaacagagt
gcacaagagtatatgctggatgaagacgaagaggatgaggaggaagatctggcaaaacag
gtggcagatatgaaggctcacggaaaggttatacttgatggtgtggagtacaaggtggag
agcttgggaagtcacagttccccatctccacggcagtgtgccacacctccaagctatagt
gccacgcctcccagccactgtggcagctcaggtccttcctctgtcgacggtaaaggcgac
tcccagcgaaattcaatggaagacggcttcagactggagcagagaccaaattccatgacg
ggtttgatcccagtttatcccggtgaatctgtggctccgattcggacggctaaggcagag
cgtaggcagcaagatcggttacgcatgcagagcccggagcttgccgtcgctatggacaag
gagctgtcgcctgctgaaaaacgagccctggaggcagagaagagggccatgtggagagca
gccaggccttatggtctagaggaggacgtaaggcagtatgagcaagacctggctaagcgg
ctctaccagtcccgtgtgagggcatcactaggcagtgctgcaacccctcccaattcctgc
tcctcctcttcctgtcagcccaggatgaagtctctagagcaggatgctttgaaggcccag
atggtcattgccaagtctaaagaggggaagaagcgtggaacgttggatcagctgtcggag
tcaccgtcacctgcgcccacaccctctccaacaccaatggaagatatcagtccacgggca
gtgacttcaccaggcagactgtccctgtcagaaaagaagtttgactaccgacaattcgct
gccattccttcttccaaacccgtttacgacattcagtcccctggtgcaagtgacgacgtg
cgcttcatggatgatgcctccagtaacccagatccagaagttcccgtggccaccacatct
gctctagaggagatggctctctacagtaacaagcgcaaactacgacagggccgccgcagc
ctggaggctcctgtgcccacgtaa
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