Rhinichthys klamathensis goyatoka (western speckled dace): 130083408
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Entry
130083408 CDS
T09701
Symbol
vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130083408 (vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130083408 (vps35)
Membrane trafficking [BR:
rkg04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
130083408 (vps35)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
CENP-O
FerA
Motif
Other DBs
NCBI-GeneID:
130083408
NCBI-ProteinID:
XP_056104412
LinkDB
All DBs
Position
Unknown
AA seq
845 aa
AA seq
DB search
MNNTALSGLVVLCAGSARHHEAEQQEQQSHDTTHSQGGHPVFPLTYLIIMPTTQQSPQDE
QEKLLDEAVQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSPKSYYELYMAIS
DELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVRSFPQSRKDILK
DLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDDGEQAEEEMTGDINDSIDFVLLNFAEMN
KLWVRMQHQGHSRDREKREKERQELRILVGTNLVRLSQLEGVNVEKYKQIVLSGILEQVV
NCRDPLAQEYLMECIIQVFPDEFHLQTLNPFLRSCAELHQNVNVKNIIIALIDRLALFAH
REDGPGIPAEIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMKCYPERVDYVDK
VLESTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLQLKHFPPLFEYFDYE
SRKSMSCYVLSNILDYNTTIVAQDQVDAILSLVSTLIQDQPDQPAEDPDPEDFAEEQSLV
GRFIHLLHSDDPDQQYLILNTARKHFGAGGNQRIRHTLPPLVFAAYHLAFRYKENSSSDD
KWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHETVAYEFMSQAF
SLYEDEISDSKAQLAAITLIIGTFERSRCFSEENHEPLRTQCALAASKLLKKPDQCRAVS
ICAHLFWSGRNTDKGGEEIRDGRRVMECLKKALKIANQCMDPSLQVQLFIEILNRYICFY
ERENDAVTVQVLNQLIQKIREDLPNLEASEETEQINKHFHNTLEHLRLQRESPESEGPAY
EGLVL
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgaataatacagctctctcagggcttgttgtgttgtgtgcgggcagtgctcgtcatcat
gaggcggaacagcaggaacagcagtcacatgacacgacacattcacaggggggtcatcca
gtgtttcctctaacatatctgataatcatgccgaccacacagcagtcgccccaggatgag
caggagaagctgttggatgaagctgtgcaggcagtcaaggttcagtcatttcaaatgaag
cgctgtctggacaagaacaagctgatggatgcactgaaacatgcctcaaatatgttgggg
gagttgaggacttctatgctttctcccaagagctactacgaactctacatggccatctca
gatgagctgcattacctggaggtctatttgacagatgagttcgccaaaggccgcaaggtg
gctgacctctatgagcttgttcaatatgcagggaacatcatccctagactgtacctgttg
ataactgtcggagtggtttacgttcgctctttcccacaatcccgcaaagacatactgaag
gacctggtggaaatgtgtcgtggggtgcagcatccactccggggcttgttcctcaggaac
tacctgttgcagtgcacgcgcaacatcctgcctgatgatggagagcaggctgaggaagag
atgaccggagacattaatgactccattgactttgtcctgctgaattttgccgagatgaat
aaactgtgggtgcggatgcagcatcagggacacagtagggaccgagaaaagagagagaag
gagaggcaagagctgcgtatccttgtagggactaatctggtccgactgagccagctggaa
ggcgtcaatgtggaaaagtacaaacagatcgtgctgtctgggatcttggagcaggtggtg
aactgtagagaccccctagcacaggaatacctcatggagtgcatcatacaggtctttcca
gatgagttccacctgcagacgttgaaccctttccttcgctcctgtgccgagctgcaccaa
aacgtgaacgtcaagaacatcataattgctcttattgacaggttggccttgtttgctcac
agagaagatggacctggaatccctgctgaaataaagctgtttgatatcttctcacagcaa
gtggcaactgtcatacagtctcgtcaggacatgccatctgaagatgttgtttcactccaa
gtgtctctcatcaatctggccatgaagtgctaccctgagcgtgtggactatgtggataaa
gtgttggaaagtactgtggagattttcaacaaactcaacctggaacacattgccaccagc
agcgcggtgtctaaagagctgaccaggcttctaaagatccccgtggacacgtacaacaac
atcctcactgtactccagctcaagcacttcccaccactcttcgagtacttcgattatgaa
tcacgcaaaagcatgagctgctacgtgctgagcaacattctggactacaacaccaccata
gtggcccaagatcaggttgatgcaatcctgagcctggtgtctacgctgatccaggaccag
ccagatcagcctgctgaggatcctgacccagaggactttgcagaggaacagagtttagtg
ggccgcttcattcatctgctgcattcagacgaccctgaccagcagtatctgattttaaac
actgccaggaaacactttggcgctggggggaaccagagaattcgacacactcttccccca
ctggtgttcgctgcttatcatctggccttccgttacaaagaaaactcctcctcggatgat
aaatgggaaaagaaatgtcagaagattttctcattcgcccatcagaccatcagcgctctg
atcaaagcagagctggcagagttacccctgaggctcttcctccagggggctctggcggct
ggagagattggcttcgagaaccacgaaaccgttgcctatgagttcatgtctcaggcgttc
tctctgtatgaagacgagatcagtgactcaaaggctcagctggccgccatcaccctgatc
attggcacgtttgagcgctcgcggtgcttcagtgaagagaaccacgagcccctgcgtacc
cagtgcgctctggctgcctccaaactgctgaagaaacccgaccagtgccgtgcagtcagt
atttgtgcccaccttttctggtcaggacgcaacactgacaaaggtggagaagagatccgt
gatgggcggagggtgatggaatgcttaaagaaggctctgaaaatcgctaaccagtgcatg
gacccgtccttgcaagttcagctcttcatcgagatcctcaacagatacatctgcttctat
gagcgagagaatgatgcggtgacggtccaagttctgaatcagctgatccagaagatccgt
gaggatctcccaaacctggaggccagcgaggagacggagcagattaacaaacacttccac
aatacactggagcacctgcgtctgcagagagagtcgcccgagtccgaaggccccgcttac
gaagggctggtgctgtag
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