Rhinichthys klamathensis goyatoka (western speckled dace): 130083504
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Entry
130083504 CDS
T09701
Symbol
usp48
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48 isoform X1
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rkg01002
]
130083504 (usp48)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130083504 (usp48)
Enzymes [BR:
rkg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130083504 (usp48)
Peptidases and inhibitors [BR:
rkg01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
130083504 (usp48)
Ubiquitin system [BR:
rkg04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130083504 (usp48)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
DUF4808
Motif
Other DBs
NCBI-GeneID:
130083504
NCBI-ProteinID:
XP_056104516
LinkDB
All DBs
Position
Unknown
AA seq
1057 aa
AA seq
DB search
MCVTVKMAPRLQLEKAAWRWAETVKPEDITHEHIELAYRIAVLACKRGACRRNCKGNPNC
LVGIGEQSWLGEIDENTFHNIDDPNSERRDKNTFVGLTNLGATCYVNTFLQVWFHNLELR
RALYRFQNSRAEGHNTDSDYEPRTICEHLQYLFALLQNSNRRYIDPSGLVKALGLDTGQQ
QDAQEFSKLFLSLLEDTLSKQKDPNLQNVIQQQFCGQFSYVTVCNKCGRESPLPSRFYEL
ELNIQGHKNLTECVTEFLKEEKLEGDNRYYCESCQSKQNATRRIKLQSLPRTLNFQLMRF
VFDRQSGHKKKLNTFISFPEVLDMGPFLEGKEEKCTYELSAVLIHRGVSAYSGHYIAHVR
DAHTNDWYKFNDEEIEKMEGKKLQLGVEEDIAETGKSQTRKPKCSKGYHCSRNAYMLVYQ
QQTEEIDQTETNVEVPAFLHKLVEQDNKKFEEWCNEMADMRKQSVDKGKAKHEEVKELYE
LLPAEDGQSYEFVPLEWLKKWLDDSTATKEIDNSQFLCSHGKLHPDKIDEAKRISLKAAN
LLFDRYGGGPRLDWSYLCRDCVTQRCRVIRLKNQLNEDYKEVTNFAKASLKSNESGFWIG
KASLRSWRQLALDQLEEDEEETKHNNGKMNGEKSSSPADEVKGDSDERDGEEMKNFNEDI
LCYHGGLSILENDRRLVSAEVWNKLRMYFPKAPEFAQHHEPCQQCMRLDREGKENEALNR
MMANEQKSSLLNLFQEKNRPTLQKWPQDTDVLYIVPLYFVEEWRKFIRRPAKSNPVSNVG
NSILLCPHGGFMFTYDSMLQGDAQHIALLWPAEWDVIYKMFLVDHVISIYQIHDKTQENG
IVQYQTHPDLCRECREGFIFQQQRDMREYAQATVYVRKVIDNKMMIKESAPEFSVSGSDV
EDEREEPKIDGEKDPDFSQLPSLHQSEGGAKRQKLNDTVSLSTPAVASASKSGIRRSTRH
RKLRGEKALIVSANQTLKELKIQIMHAFSVAPFDQNLSIDGRCLTDDSATLGSLGVIPES
IICLKADEPIADYAAMDDVYQVCMPEEGFKGTGLLGH
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtaactgtcaaaatggctcctcggttgcagctggaaaaagctgcgtggcggtgg
gcagagacagtcaaaccagaggacatcacacatgaacatatcgagttagcttataggatt
gcagtgctggcttgcaaaagaggggcatgcaggaggaactgtaaagggaatcctaattgt
cttgtcggtattggggaacaatcatggttaggagaaattgatgaaaataccttccacaac
atcgatgacccaaactcagaaagacgagataagaacacatttgtgggcctgacgaatctt
ggcgccacgtgttacgtgaacactttcctccaggtgtggttccacaatctggagctccgc
agagccttatatcgatttcaaaattcacgagctgaaggacacaacacggattcagattat
gagccacggacgatatgcgaacatctccagtatctgtttgcattgctacagaacagcaac
agacggtatatcgacccctcagggctggtgaaggctcttgggctcgatacagggcaacag
caggatgctcaggaattctctaaactcttcctatcacttcttgaagacacactttcaaag
cagaaggaccctaatctccaaaatgtcatccaacagcagttctgtgggcagttctcttat
gttactgtatgcaacaaatgtggacgtgagtctcctctaccatcacgattttatgaactg
gagttgaacattcaaggacataaaaacctcacggagtgcgttacagagtttttgaaggag
gagaagctggaaggtgataatcgttactattgcgagagctgtcagagtaaacagaacgcc
acccgtcggatcaagctccagagtcttccccgcacactcaactttcaactcatgcgattt
gtttttgataggcaaagtggtcataagaagaaacttaacaccttcattagttttccagaa
gttcttgatatggggccgtttttggaaggaaaagaagagaaatgcacgtatgaactcagc
gccgtgttgattcatcgtggtgtgagcgcatactctggtcactacattgctcacgttaga
gatgcccacacaaatgactggtacaaattcaatgatgaggagatcgagaaaatggaggga
aagaaacttcagctgggcgttgaagaagacattgccgagacgggcaagtctcaaacccga
aagccaaaatgtagcaaaggctatcactgttcgagaaacgcatacatgttagtgtaccaa
cagcagactgaagagattgaccaaacagaaactaacgttgaagtaccagcttttctccat
aagctagttgaacaggacaacaagaagtttgaggagtggtgcaatgagatggcagacatg
cgaaaacaaagcgttgacaaaggcaaagccaaacatgaggaggtgaaggagctctacgaa
ttgttacccgcggaagacggccagtcgtatgagtttgtgcctctggagtggctgaagaaa
tggcttgatgactccacggccaccaaggaaattgacaacagccaattcctttgctcccat
ggcaaactgcacccagacaagattgacgaggccaaaagaatatccttgaaggctgccaat
ctcctcttcgaccgctacggaggaggacccagactagactggtcatacctctgcagagac
tgtgtcactcagcgatgtagggtaatcagactgaaaaaccagctaaatgaagattacaaa
gaggtcacaaattttgccaaagcctctttgaaaagtaatgaatcggggttctggatcggt
aaggcttctctaaggagctggagacaattggcattagaccagctagaggaggatgaggag
gaaaccaaacacaacaacggcaaaatgaacggagagaaaagcagcagcccagctgatgaa
gttaaaggagatagtgacgaaagggacggtgaagagatgaagaactttaatgaagacatt
ctctgttatcatggtggtttgagtatactagagaatgacagacggctggtctctgcagaa
gtgtggaataaactacggatgtatttccccaaagcaccagagttcgcgcaacatcacgag
ccctgtcagcagtgcatgaggctggatagggaagggaaagagaacgaggctttgaacaga
atgatggcaaatgaacagaagagctccctgctcaacctcttccaggagaaaaatcggccc
acgctgcaaaaatggccacaggacacagatgttttgtacattgtacccctttactttgta
gaagaatggaggaaatttatcaggaggccagcaaagagtaacccagtgtccaatgtgggg
aacagtatcctgctctgccctcatggtggcttcatgttcacctatgactccatgctgcaa
ggagacgcccaacatatagctcttctctggcctgctgaatgggacgtgatctacaaaatg
tttctggtggaccatgtcatctccatatatcagattcatgataaaacgcaagaaaatggc
attgtgcaataccaaactcatccagatttgtgtcgagaatgcagagagggcttcatattc
cagcagcagagggacatgagggagtacgcgcaggccactgtgtatgttcgcaaagtcatt
gacaataaaatgatgattaaggaatctgcccctgagttcagtgtgagtgggtcagatgtt
gaggatgaaagagaagagccaaagatagatggagagaaagatcctgacttcagtcagctc
ccttctttacatcagtctgagggcggagccaaacggcagaagctaaacgacaccgtctct
ctctctacacccgctgttgcctctgcttccaagtcgggcatcaggaggagcacaaggcac
aggaaactccgtggggagaaagccctcatcgtctctgccaaccagacgctcaaagagctt
aagatccagatcatgcatgcattctctgtggctccattcgaccaaaacctttccatagac
ggacgctgtttaacagatgactccgccacactaggaagtcttggagtcatcccagagagc
ataatttgccttaaggctgatgaacccattgctgattatgctgcaatggatgatgtttat
caagtctgtatgcctgaagaaggatttaaaggcactggactattaggacactga
DBGET
integrated database retrieval system
