KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130083814
Entry
130083814         CDS       T09701                                 
Symbol
arfgef1
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1 isoform X1
  KO
K18442  brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    130083814 (arfgef1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rkg04131]
    130083814 (arfgef1)
Membrane trafficking [BR:rkg04131]
 Endosome - Golgi transport
  Arf GTPases and associated proteins
   Arf GTPase associated proteins
    130083814 (arfgef1)
SSDB
Motif
Pfam: Sec7 BIG2_C Sec7-like_HUS DCB Sec7-like_HDS Type_ISP_C CheX Herpes_UL14
Other DBs
NCBI-GeneID: 130083814
NCBI-ProteinID: XP_056104802
LinkDB
Position
Unknown
AA seq 1861 aa
MYEGKKTKNMFLTRALEKILADKEVKKAHHSQLRKACEVALEEIKAESEKLSPPAGDNKS
SSSTLPPIKSKTNFIEADKYFLPFELACQSKCPRIVITSLDCLQKLIAYGHLTGSAPDNT
TPGKKLIDRIIETICGCFQGPQTDEGVQLQIIKALLTAVTSQQIEIHEGTVLQAVRTCYN
IYLASKNLINQTTAKATLTQMLNVIFARMENQALTNHKINWSLASRKRDRQLQEAKQMER
ERHRQHSPVSQQEPESPGQRHTDTPGKSLPAEANGGPGHQGSKVEQGSPPYESPEPENGT
DFCPAENEQTEADQATAAAQSAAEHGTEATVEEENQNYEEKAQEIVQSILQEVINTVAGD
LKESREAEAEPPESIPNSLEEEGGLGSDNENVHANGIPGTPISASFTPSLPDDRLSVSSN
DTQDSVATTGPAPGAKFSHILQKDAFLVFRSLCKLSMKPLSDGPPDPKSHELRSKVLSLQ
LLLSILQNAGPIFKTNEMFINAIKQYLCVALSKNGVSSVPEVFELSLSIFLTLLSNFKTH
LKMQIEVFFKEIFLYILETSTSSYDHKWMVIQTLTRICADAQSVVDIYVNYDCDLNAANI
FERLVNDLSKIAQGRGGHELGTNPLQELTLRKKGLECLVSILKCMVEWSKDQYVNPNSQT
SLGQEKPLEQETNESKHPETINRYGSINSLDSTASSGIGSYSTQMSGTDNPEQFEVLKQQ
KEIIEQGIDLFNKKPKRGIQYLQEQGMLGTTPEDIAQFLHQEERLDSIQVGEFLGDNDRI
NKEVMYAYVDQMDFQGKDFVPALRMFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTLF
ASADTAYVLAYSIIMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSAIYDEIA
GKKISMKETKEIHIKSNKQSVASEKQRRLLYNVEMEQMAKTAKALMEAVSHVQAPFTSAT
HLEHVRPMFKLAWTPFLAAFSVGLQDCDDTEVASLCLEGIRCAIRIACIFSIQLERDAYV
QALARFTLLTASSGITEMKQKNIDTIKTLITVAHTDGNYLGNSWHEILKCISQLELAQLI
GTGVKARYISGTVRGKEGFITSTKEQTSDEYLGLGGNVDRKQIASIQESIGETSSQSVVV
AVDRIFTGSTRLDGNAIVDFVRWLCAVSMDELASPTHPRMFSLQKIVEISYYNMGRIRLQ
WSRIWEVIGDHFNKVGCNPNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHI
MKKNRSPTIRDMVVRCIAQMVNSQAGNIRSGWKNIFSVFHLAASDQDESIVELAFQTTGH
IVTNVFEKHFPATIDSFQDAVKCLSEFACNASFPDTSMEAIRLIRHCAKYVSDRPQAFKD
CTSDDMNVAPEDRVWVRGWFPILFELSCIINRCKLDVRTRGLTVMFEVMKTYGHTYEKHW
WQDLFRIVFRIFDNMKLPEQQTEKAEWMTTTCNHALYAICDVFTQYFESLSDVLLDDILS
QLYWCVQQDNEQLARSGTNCLENVVILNGEKFNPETWDKTCNCMLDIFQTTIPHMLLTWR
PAGTEGDHVTQLDSDKQLDSISQKSVDIQTRADDQQSVNSMEKALVDNRRQSQFSVALEA
QEQRLFAALLIKCVVQLELIQTIDNIVFFPATSKKEDAENLAAAQRDALDADVHVDTQDQ
GMYRYLTSEQLFKLLDCLLESHRFAKAFNSNNEQRTALWKAGFKGKSKPNLLKQETSSLA
CGLRILFRMYMDQSRQDAWEEVQRRLLNVCSDAVAYFLTLTSESHREAWTNLLLLFLTKV
LKISDDRFKAHVSRYYPLLCEIMQFDLIPELRAVLRKFFLRIGLVFQITQSLETDQPPNN
A
NT seq 5586 nt   +upstreamnt  +downstreamnt
atgtatgaaggcaaaaagacgaaaaacatgtttttaaccagagctttggaaaagatcttg
gccgacaaggaggtgaaaaaggctcatcactcgcagctgcgcaaagcctgtgaggtggca
ctagaggaaatcaaggcggaatctgagaaattaagcccaccggctggggacaacaagtca
agttccagtactctgccgccaatcaaatccaagaccaacttcattgaagcagataaatac
ttcctgccgtttgagttggcctgtcagtccaaatgtccgcgcatcgtcatcacctctcta
gactgtttacagaaactcatagcatatggtcacctgacggggagcgctccagacaacaca
accccaggaaaaaagctcatcgacaggatcatagagactatatgtggctgtttccaagga
ccacagacggatgaaggcgtccagttacaaattataaaggccttgcttacagccgtgacc
tcccagcaaatagagatccatgaaggtacggtgctgcaggccgtaagaacgtgctacaac
atctatctggccagtaagaacctcatcaaccagaccacggccaaagccaccctcacgcag
atgctgaatgtgatattcgcccgcatggagaaccaagcacttacaaatcacaagatcaat
tggtctttggcatcaagaaagcgagatcgtcagctgcaggaagccaagcagatggagcga
gagaggcacaggcagcattctccagtcagccagcaagaaccagagtctcctggacagcgg
cacaccgatacccctgggaaaagcctccccgccgaggccaacggtggaccgggacaccag
ggcagcaaggtcgagcagggatccccaccgtacgagagtcccgagccagagaacggcacc
gacttctgccctgcggagaatgagcagaccgaggcagaccaggccacagcagctgcgcaa
agtgcggcagagcatggcacggaagccaccgtggaagaagaaaaccagaactatgaagag
aaggcacaggagattgtacagagcatattgcaagaagtcataaacacagttgctggagat
cttaaggaaagccgtgaggctgaggctgagccacctgagagcattccaaactctctggaa
gaggagggaggcttgggcagcgacaacgaaaatgttcacgccaacggcatccctggcacg
cccatttctgcgagcttcactccgtccctgcccgacgacagactgtctgtctcctccaat
gacactcaggattctgtagctaccactggtccagcaccaggtgcaaagttttcccacatt
ctccagaaggatgcattcttggtattccgttctctctgcaagctctccatgaagcccctt
tcagacggtcctcctgatcccaaatcccacgagcttcggtccaaggtcctctcgctgcag
ctcctcctgtccatcctgcagaacgctgggcccatcttcaaaaccaatgagatgttcatc
aacgccatcaagcagtacctgtgcgtagcgctgtctaaaaatggtgtctcctccgtcccc
gaagtgttcgagctgtcgctgtccatcttcctcaccctcctgtccaacttcaagacacat
ctcaagatgcaaattgaggtgtttttcaaagagattttcctttatattctggaaacgtcc
acaagctcatatgaccacaagtggatggtaattcaaaccctcaccagaatatgtgcagat
gcccagagtgtggtagatatttatgttaattatgattgtgacctgaatgctgctaatatt
ttcgagaggctggtgaatgacctctcaaagattgcacaaggacgaggaggccatgaactg
ggtacaaacccacttcaggagctgactctaaggaaaaaaggactggagtgtttggtgtcc
attctcaagtgtatggtggagtggagcaaagaccaatatgtcaaccccaattcccagaca
agtctcggccaagaaaagcctttagaacaggaaaccaatgagtcaaagcatccagaaacg
attaaccgctacggcagcataaactcattggactccaccgcctcgtcaggcatcgggagc
tacagcacacagatgtctgggacggacaaccctgagcagtttgaggtcctcaaacaacag
aaggagatcatagagcaaggcattgacctgttcaacaaaaaaccaaagaggggcattcag
tacctgcaggagcaaggcatgctgggaaccacgcctgaagatatcgcccagtttttacac
caagaggaaagactcgactctatccaggtaggagagtttctcggagacaacgatcgcatc
aataaagaggttatgtatgcctacgtcgaccaaatggacttccagggcaaagatttcgtg
ccagccttgcgcatgttcctcgagggtttccgtctgcccggagaggcccagaaaatcgat
cgactgatggagaaatttgctgctagatatttagaatgcaaccaagggcaaacactgttc
gccagcgcagacaccgcatacgtcctcgcgtattcaatcatcatgttgactacagatcta
cacagtccgcaggtgaagaataaaatgacgaaagagcaatacatcaagatgaaccgaggt
atcaatgacagtaaagatttaccagaggagtatctctcagccatttatgatgaaatcgca
gggaaaaaaatatctatgaaggagacgaaggaaatacatatcaagtcaaataagcaaagt
gtggccagtgagaagcagaggaggcttctgtataatgttgagatggagcaaatggcaaag
acagccaaggctttgatggaggctgtgagccacgttcaggcgcccttcaccagcgccacc
cacctcgagcacgtcagaccaatgtttaagctggcctggacaccctttctggctgcgttc
agcgtgggtctgcaagactgtgatgacactgaggtggcttctttgtgtcttgagggaatc
cgctgtgctatcaggatagcgtgcatcttcagcattcagttggagcgagacgcgtacgtt
caggctctggcccgcttcacgttgctgacggccagctcgggcatcactgagatgaagcag
aagaacatcgacaccatcaagaccctcattacagtggcacacacagatgggaattaccta
ggaaactcttggcatgagatcctgaagtgcattagtcagctggagttggcccagctcatc
gggacaggagtgaaggctcggtacatatcaggaaccgtacgggggaaggaaggcttcatc
accagcaccaaggaacagacttctgacgagtacctgggcttgggagggaacgttgatcgc
aaacagatcgcaagcattcaggagtctatcggggagaccagctcgcaaagcgtggtagtc
gctgtggaccggatattcacaggctctaccagacttgatggaaatgccatcgtggacttt
gtccgatggctgtgtgctgtatcaatggatgaattggcctcccctacacaccctcgaatg
ttcagtctgcagaagatcgtggagatttcgtactacaacatgggtcgtatcaggctgcag
tggtccaggatatgggaggttataggggatcatttcaataaggtcggctgtaatcccaat
gaggatgttgctattttcgctgtggactctttgaggcagctatccatgaaatttttggag
aagggagagttggccaatttcagattccagaaggatttcctcaggccgtttgagcacata
atgaaaaagaacagatctcctaccattagagacatggtggtccgctgcatagcccagatg
gtcaactctcaggctgggaatattagatcagggtggaagaacattttctccgtgtttcat
cttgctgcctccgatcaggatgagagcatagtggagctggccttccagacaactggacac
atcgtcacgaatgtatttgagaagcatttccctgcaaccattgactccttccaggacgct
gtcaaatgtctgtctgagttcgcctgcaacgcttctttccccgacaccagcatggaggcc
atccgtctcatccgccactgcgctaaatacgtctccgaccgacctcaggcatttaaagac
tgcaccagtgatgatatgaacgtcgctccggaggaccgtgtctgggtgagaggctggttc
cccatcctctttgagctgtcatgcatcatcaacaggtgtaagctggacgtccggaccagg
ggtctgacagtgatgtttgaggtgatgaagacgtacggtcacacctacgagaaacactgg
tggcaggatctgttccgcattgtgttcaggatctttgacaacatgaagcttcctgagcaa
cagactgagaaagcggagtggatgaccaccacctgtaatcatgcactttatgctatctgt
gacgttttcacacagtactttgaatctctgagtgatgttctgttagatgatatcctctct
cagctctactggtgtgtgcaacaagataatgagcaattggcgagatcaggcactaattgc
cttgaaaacgtggtcatcctcaacggtgagaagtttaaccctgagacctgggacaagaca
tgcaactgtatgctagacatcttccaaaccaccatcccacacatgctgttgacgtggaga
ccggccggtacagagggagatcacgtgactcagctggactctgataaacagctggactcc
atttcccagaagtcagtggatattcagactcgggcagatgaccagcagtctgtgaacagt
atggagaaggctttggttgacaaccgtagacagagtcagttcagtgttgctttagaagcc
caggaacagaggctgtttgcggctctgctcataaagtgtgtggtccagctggagctcatt
cagaccatagacaacattgtgttctttcctgcaaccagtaagaaggaggatgctgaaaac
ttggcagcagcacagagagatgctttggatgccgatgtacatgtagatactcaggaccag
ggaatgtatcgctacctgacctcagaacagctctttaaactgctcgactgtctgctggag
tctcatcgctttgccaaggcctttaactccaataatgaacagagaaccgcactgtggaag
gccggtttcaaagggaagtcgaagcccaatctgctgaaacaggagaccagcagcctggcg
tgtggcctgcgtatcctcttccgcatgtacatggaccagagcaggcaggacgcctgggag
gaggtgcagaggagactgctcaacgtgtgcagtgacgctgtggcttacttcctgacgctg
acgtctgagagccaccgtgaggcctggactaacctactgctgctcttccttaccaaagtg
ctcaagatcagcgacgacaggttcaaggcccacgtgtcccgatactaccctctgctttgt
gagatcatgcagtttgacctgatcccggagctgagggccgtcctgcgcaagttcttcctg
cgcatcggattggtgttccagatcacccagagtttggaaacggatcagcctcccaacaac
gcctag

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