Rhinichthys klamathensis goyatoka (western speckled dace): 130083814
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Entry
130083814 CDS
T09701
Symbol
arfgef1
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1 isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130083814 (arfgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130083814 (arfgef1)
Membrane trafficking [BR:
rkg04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
130083814 (arfgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
Type_ISP_C
CheX
Herpes_UL14
Motif
Other DBs
NCBI-GeneID:
130083814
NCBI-ProteinID:
XP_056104802
LinkDB
All DBs
Position
Unknown
AA seq
1861 aa
AA seq
DB search
MYEGKKTKNMFLTRALEKILADKEVKKAHHSQLRKACEVALEEIKAESEKLSPPAGDNKS
SSSTLPPIKSKTNFIEADKYFLPFELACQSKCPRIVITSLDCLQKLIAYGHLTGSAPDNT
TPGKKLIDRIIETICGCFQGPQTDEGVQLQIIKALLTAVTSQQIEIHEGTVLQAVRTCYN
IYLASKNLINQTTAKATLTQMLNVIFARMENQALTNHKINWSLASRKRDRQLQEAKQMER
ERHRQHSPVSQQEPESPGQRHTDTPGKSLPAEANGGPGHQGSKVEQGSPPYESPEPENGT
DFCPAENEQTEADQATAAAQSAAEHGTEATVEEENQNYEEKAQEIVQSILQEVINTVAGD
LKESREAEAEPPESIPNSLEEEGGLGSDNENVHANGIPGTPISASFTPSLPDDRLSVSSN
DTQDSVATTGPAPGAKFSHILQKDAFLVFRSLCKLSMKPLSDGPPDPKSHELRSKVLSLQ
LLLSILQNAGPIFKTNEMFINAIKQYLCVALSKNGVSSVPEVFELSLSIFLTLLSNFKTH
LKMQIEVFFKEIFLYILETSTSSYDHKWMVIQTLTRICADAQSVVDIYVNYDCDLNAANI
FERLVNDLSKIAQGRGGHELGTNPLQELTLRKKGLECLVSILKCMVEWSKDQYVNPNSQT
SLGQEKPLEQETNESKHPETINRYGSINSLDSTASSGIGSYSTQMSGTDNPEQFEVLKQQ
KEIIEQGIDLFNKKPKRGIQYLQEQGMLGTTPEDIAQFLHQEERLDSIQVGEFLGDNDRI
NKEVMYAYVDQMDFQGKDFVPALRMFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTLF
ASADTAYVLAYSIIMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSAIYDEIA
GKKISMKETKEIHIKSNKQSVASEKQRRLLYNVEMEQMAKTAKALMEAVSHVQAPFTSAT
HLEHVRPMFKLAWTPFLAAFSVGLQDCDDTEVASLCLEGIRCAIRIACIFSIQLERDAYV
QALARFTLLTASSGITEMKQKNIDTIKTLITVAHTDGNYLGNSWHEILKCISQLELAQLI
GTGVKARYISGTVRGKEGFITSTKEQTSDEYLGLGGNVDRKQIASIQESIGETSSQSVVV
AVDRIFTGSTRLDGNAIVDFVRWLCAVSMDELASPTHPRMFSLQKIVEISYYNMGRIRLQ
WSRIWEVIGDHFNKVGCNPNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHI
MKKNRSPTIRDMVVRCIAQMVNSQAGNIRSGWKNIFSVFHLAASDQDESIVELAFQTTGH
IVTNVFEKHFPATIDSFQDAVKCLSEFACNASFPDTSMEAIRLIRHCAKYVSDRPQAFKD
CTSDDMNVAPEDRVWVRGWFPILFELSCIINRCKLDVRTRGLTVMFEVMKTYGHTYEKHW
WQDLFRIVFRIFDNMKLPEQQTEKAEWMTTTCNHALYAICDVFTQYFESLSDVLLDDILS
QLYWCVQQDNEQLARSGTNCLENVVILNGEKFNPETWDKTCNCMLDIFQTTIPHMLLTWR
PAGTEGDHVTQLDSDKQLDSISQKSVDIQTRADDQQSVNSMEKALVDNRRQSQFSVALEA
QEQRLFAALLIKCVVQLELIQTIDNIVFFPATSKKEDAENLAAAQRDALDADVHVDTQDQ
GMYRYLTSEQLFKLLDCLLESHRFAKAFNSNNEQRTALWKAGFKGKSKPNLLKQETSSLA
CGLRILFRMYMDQSRQDAWEEVQRRLLNVCSDAVAYFLTLTSESHREAWTNLLLLFLTKV
LKISDDRFKAHVSRYYPLLCEIMQFDLIPELRAVLRKFFLRIGLVFQITQSLETDQPPNN
A
NT seq
5586 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaaggcaaaaagacgaaaaacatgtttttaaccagagctttggaaaagatcttg
gccgacaaggaggtgaaaaaggctcatcactcgcagctgcgcaaagcctgtgaggtggca
ctagaggaaatcaaggcggaatctgagaaattaagcccaccggctggggacaacaagtca
agttccagtactctgccgccaatcaaatccaagaccaacttcattgaagcagataaatac
ttcctgccgtttgagttggcctgtcagtccaaatgtccgcgcatcgtcatcacctctcta
gactgtttacagaaactcatagcatatggtcacctgacggggagcgctccagacaacaca
accccaggaaaaaagctcatcgacaggatcatagagactatatgtggctgtttccaagga
ccacagacggatgaaggcgtccagttacaaattataaaggccttgcttacagccgtgacc
tcccagcaaatagagatccatgaaggtacggtgctgcaggccgtaagaacgtgctacaac
atctatctggccagtaagaacctcatcaaccagaccacggccaaagccaccctcacgcag
atgctgaatgtgatattcgcccgcatggagaaccaagcacttacaaatcacaagatcaat
tggtctttggcatcaagaaagcgagatcgtcagctgcaggaagccaagcagatggagcga
gagaggcacaggcagcattctccagtcagccagcaagaaccagagtctcctggacagcgg
cacaccgatacccctgggaaaagcctccccgccgaggccaacggtggaccgggacaccag
ggcagcaaggtcgagcagggatccccaccgtacgagagtcccgagccagagaacggcacc
gacttctgccctgcggagaatgagcagaccgaggcagaccaggccacagcagctgcgcaa
agtgcggcagagcatggcacggaagccaccgtggaagaagaaaaccagaactatgaagag
aaggcacaggagattgtacagagcatattgcaagaagtcataaacacagttgctggagat
cttaaggaaagccgtgaggctgaggctgagccacctgagagcattccaaactctctggaa
gaggagggaggcttgggcagcgacaacgaaaatgttcacgccaacggcatccctggcacg
cccatttctgcgagcttcactccgtccctgcccgacgacagactgtctgtctcctccaat
gacactcaggattctgtagctaccactggtccagcaccaggtgcaaagttttcccacatt
ctccagaaggatgcattcttggtattccgttctctctgcaagctctccatgaagcccctt
tcagacggtcctcctgatcccaaatcccacgagcttcggtccaaggtcctctcgctgcag
ctcctcctgtccatcctgcagaacgctgggcccatcttcaaaaccaatgagatgttcatc
aacgccatcaagcagtacctgtgcgtagcgctgtctaaaaatggtgtctcctccgtcccc
gaagtgttcgagctgtcgctgtccatcttcctcaccctcctgtccaacttcaagacacat
ctcaagatgcaaattgaggtgtttttcaaagagattttcctttatattctggaaacgtcc
acaagctcatatgaccacaagtggatggtaattcaaaccctcaccagaatatgtgcagat
gcccagagtgtggtagatatttatgttaattatgattgtgacctgaatgctgctaatatt
ttcgagaggctggtgaatgacctctcaaagattgcacaaggacgaggaggccatgaactg
ggtacaaacccacttcaggagctgactctaaggaaaaaaggactggagtgtttggtgtcc
attctcaagtgtatggtggagtggagcaaagaccaatatgtcaaccccaattcccagaca
agtctcggccaagaaaagcctttagaacaggaaaccaatgagtcaaagcatccagaaacg
attaaccgctacggcagcataaactcattggactccaccgcctcgtcaggcatcgggagc
tacagcacacagatgtctgggacggacaaccctgagcagtttgaggtcctcaaacaacag
aaggagatcatagagcaaggcattgacctgttcaacaaaaaaccaaagaggggcattcag
tacctgcaggagcaaggcatgctgggaaccacgcctgaagatatcgcccagtttttacac
caagaggaaagactcgactctatccaggtaggagagtttctcggagacaacgatcgcatc
aataaagaggttatgtatgcctacgtcgaccaaatggacttccagggcaaagatttcgtg
ccagccttgcgcatgttcctcgagggtttccgtctgcccggagaggcccagaaaatcgat
cgactgatggagaaatttgctgctagatatttagaatgcaaccaagggcaaacactgttc
gccagcgcagacaccgcatacgtcctcgcgtattcaatcatcatgttgactacagatcta
cacagtccgcaggtgaagaataaaatgacgaaagagcaatacatcaagatgaaccgaggt
atcaatgacagtaaagatttaccagaggagtatctctcagccatttatgatgaaatcgca
gggaaaaaaatatctatgaaggagacgaaggaaatacatatcaagtcaaataagcaaagt
gtggccagtgagaagcagaggaggcttctgtataatgttgagatggagcaaatggcaaag
acagccaaggctttgatggaggctgtgagccacgttcaggcgcccttcaccagcgccacc
cacctcgagcacgtcagaccaatgtttaagctggcctggacaccctttctggctgcgttc
agcgtgggtctgcaagactgtgatgacactgaggtggcttctttgtgtcttgagggaatc
cgctgtgctatcaggatagcgtgcatcttcagcattcagttggagcgagacgcgtacgtt
caggctctggcccgcttcacgttgctgacggccagctcgggcatcactgagatgaagcag
aagaacatcgacaccatcaagaccctcattacagtggcacacacagatgggaattaccta
ggaaactcttggcatgagatcctgaagtgcattagtcagctggagttggcccagctcatc
gggacaggagtgaaggctcggtacatatcaggaaccgtacgggggaaggaaggcttcatc
accagcaccaaggaacagacttctgacgagtacctgggcttgggagggaacgttgatcgc
aaacagatcgcaagcattcaggagtctatcggggagaccagctcgcaaagcgtggtagtc
gctgtggaccggatattcacaggctctaccagacttgatggaaatgccatcgtggacttt
gtccgatggctgtgtgctgtatcaatggatgaattggcctcccctacacaccctcgaatg
ttcagtctgcagaagatcgtggagatttcgtactacaacatgggtcgtatcaggctgcag
tggtccaggatatgggaggttataggggatcatttcaataaggtcggctgtaatcccaat
gaggatgttgctattttcgctgtggactctttgaggcagctatccatgaaatttttggag
aagggagagttggccaatttcagattccagaaggatttcctcaggccgtttgagcacata
atgaaaaagaacagatctcctaccattagagacatggtggtccgctgcatagcccagatg
gtcaactctcaggctgggaatattagatcagggtggaagaacattttctccgtgtttcat
cttgctgcctccgatcaggatgagagcatagtggagctggccttccagacaactggacac
atcgtcacgaatgtatttgagaagcatttccctgcaaccattgactccttccaggacgct
gtcaaatgtctgtctgagttcgcctgcaacgcttctttccccgacaccagcatggaggcc
atccgtctcatccgccactgcgctaaatacgtctccgaccgacctcaggcatttaaagac
tgcaccagtgatgatatgaacgtcgctccggaggaccgtgtctgggtgagaggctggttc
cccatcctctttgagctgtcatgcatcatcaacaggtgtaagctggacgtccggaccagg
ggtctgacagtgatgtttgaggtgatgaagacgtacggtcacacctacgagaaacactgg
tggcaggatctgttccgcattgtgttcaggatctttgacaacatgaagcttcctgagcaa
cagactgagaaagcggagtggatgaccaccacctgtaatcatgcactttatgctatctgt
gacgttttcacacagtactttgaatctctgagtgatgttctgttagatgatatcctctct
cagctctactggtgtgtgcaacaagataatgagcaattggcgagatcaggcactaattgc
cttgaaaacgtggtcatcctcaacggtgagaagtttaaccctgagacctgggacaagaca
tgcaactgtatgctagacatcttccaaaccaccatcccacacatgctgttgacgtggaga
ccggccggtacagagggagatcacgtgactcagctggactctgataaacagctggactcc
atttcccagaagtcagtggatattcagactcgggcagatgaccagcagtctgtgaacagt
atggagaaggctttggttgacaaccgtagacagagtcagttcagtgttgctttagaagcc
caggaacagaggctgtttgcggctctgctcataaagtgtgtggtccagctggagctcatt
cagaccatagacaacattgtgttctttcctgcaaccagtaagaaggaggatgctgaaaac
ttggcagcagcacagagagatgctttggatgccgatgtacatgtagatactcaggaccag
ggaatgtatcgctacctgacctcagaacagctctttaaactgctcgactgtctgctggag
tctcatcgctttgccaaggcctttaactccaataatgaacagagaaccgcactgtggaag
gccggtttcaaagggaagtcgaagcccaatctgctgaaacaggagaccagcagcctggcg
tgtggcctgcgtatcctcttccgcatgtacatggaccagagcaggcaggacgcctgggag
gaggtgcagaggagactgctcaacgtgtgcagtgacgctgtggcttacttcctgacgctg
acgtctgagagccaccgtgaggcctggactaacctactgctgctcttccttaccaaagtg
ctcaagatcagcgacgacaggttcaaggcccacgtgtcccgatactaccctctgctttgt
gagatcatgcagtttgacctgatcccggagctgagggccgtcctgcgcaagttcttcctg
cgcatcggattggtgttccagatcacccagagtttggaaacggatcagcctcccaacaac
gcctag
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integrated database retrieval system