Rhinichthys klamathensis goyatoka (western speckled dace): 130083871
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Entry
130083871 CDS
T09701
Symbol
rnf6
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130083871 (rnf6)
Enzymes [BR:
rkg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130083871 (rnf6)
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130083871 (rnf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-ANAPC11
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-RING_4
zf-RING-like
zf-P11
Prok-RING_4
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
130083871
NCBI-ProteinID:
XP_056104891
LinkDB
All DBs
Position
Unknown
AA seq
738 aa
AA seq
DB search
MVVVRAVVCVAPLVPSWLHCNQSGEERELVHITAAVSAVSVVMDPPGGRDERHRQAERLR
REEAYYHFINELSEEEYRLMRDSNLLGTPGEVTAEELRQRLDGAKERVSSQPHPEPRPQS
SEAEGSSGPVEPGAETSNGDSLLEWLNTFRRTGNATRSGQSGNQTWRAVSRTNPNSGEFR
FSLEININHEQPEPGEHSDTPDPTELPMPPPPPPPPPPPPPPPVSSASAPTTPYNPSRSA
PYSLQHPTPYSTARPTLGRRAAVRRTRSSTAPPVTPPLTSQAPPTVLRRNLPPLPSSPPP
QAPLAFQSQEQDGSAVRGQIQVTTSSVNTEEGQNGNEGPDCPTALPQTGPQVAPAARETR
NSRTRSRGRMRRAAGAGGALSRSSRRSRSPLDRNPASSVSPTHSSTAAPVESTGSTAVAM
EMGEAATEPAAPTDPPEAGEEEGETPVSGAGGVRRHPTIMLDLQVRRIRPGENRDRDSIA
SRTRSRARAAENTVTFESDSGGFRRTISRSERAGIRTYVSTIRIPLRRISETGLGEPSSM
ALRSILRQIMTGFGELSSLMETEADSETAAPNQDSAPVAGAQPYRVGSAEGGAAHGGVES
AQEGLVEGEEEGQVRVSRTGPEGRPSSRDTNNLVENGTLPILRLAHFFLLNEDEDEEHPR
GLTKEQIDNLVTRTYGQVNMEGEQGRACSVCINEYAQGNKLRRLPCAHEFHIHCIDRWLS
ENNTCPICRQPILSSHQE
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggtagttgtccgggcagttgtttgtgtagctccgttggtcccatcttggctacattgt
aatcagagcggagaggaaagagaactcgtccatattacagctgctgtttcagcggtttct
gtggtgatggaccctcccggcggccgagacgaacgtcatcgtcaagcggagcggcttcgg
cgggaggaggcatactatcacttcattaatgaactgagtgaggaggagtacagactaatg
agagacagcaatcttctgggaacacctggtgaagtcacagcagaagagctgaggcaacgt
ctggatggtgcgaaggagcgagtgtcatctcagccacaccctgaaccccgcccacagagc
agtgaggccgagggcagtagcggtccagtcgagccaggtgctgagacgtctaatggagac
tctctgctagagtggttgaacacatttcggcggacaggaaatgccacacgtagtgggcag
agtggaaaccaaacttggcgcgccgtcagccgcaccaaccccaacagcggcgagttccgc
ttcagtcttgagatcaacatcaaccacgagcaacccgagcctggagaacacagcgacacc
cctgacccgactgaactcccaatgcctccgccgcctccccctcctcctcctcctccccct
ccccccccagtgtcatctgcctctgcacccacgaccccttacaacccctcaaggtctgca
ccttactcacttcaacaccccacgccatactctacggccaggcccaccctgggaaggagg
gctgcggtgcgccgtactcgcagtagcacggctccgcctgtaacgccgcctctgacctca
caggctcctcccacagttttgaggaggaacttgccgcctttgccaagctctcctcctcca
caggctccactcgcttttcagtcacaagagcaggatggtagtgccgtaaggggtcaaata
caggtcacaacctcctcggttaacacagaggaggggcagaatggaaatgaaggcccggac
tgccccaccgctctgcctcagaccggcccccaggtggcgccagctgcccgtgagacacga
aacagcaggactcgttcacgtggccgcatgcgccgggcggcgggagcaggtggggctttg
tctcgctcttcgagacgtagccggtcccccctggacagaaacccagcctccagtgttagc
cctacccatagcagcaccgctgccccagtggagtccactggaagtacggctgtagctatg
gagatgggcgaggccgccacagagccggctgctcctacggatcctccggaggcaggtgag
gaagagggggagactcctgtgtcaggcgctggaggtgtgcgtcgccaccccacaatcatg
ctggacctccaggttcggcgcatcaggccaggtgagaaccgggacagagacagcattgcc
agccgcactcgctctcgtgctcgggccgctgagaacacggtcaccttcgagagcgacagc
ggcggcttccgtcgtaccatctcgcgctcggagcgcgcgggaatccgcacttatgtcagc
actatacgcatcccgctacgccgcatttctgaaacgggcctcggcgagcccagctccatg
gcgctgcgatctatcctgcgtcagatcatgaccggcttcggtgagcttagctccctcatg
gagacggaggcggactcagaaactgcggcacccaaccaggactccgctcctgttgccgga
gcccagccataccgcgtcggtagcgcagagggcggtgcggcccacggcggagtggaatcg
gcacaagaaggtttagtggagggtgaggaggaaggacaagtgcgggtgagcaggactggg
ccagagggacgacctagcagcagggacactaacaacctggtggaaaacggcacattgccc
atccttaggctggcgcactttttccttctcaatgaagacgaagacgaggagcacccacgg
ggtctcaccaaagaacagatcgacaatttggtcacacgcacttacggtcaggtcaacatg
gagggcgagcagggtcgcgcttgcagcgtctgcatcaacgagtacgctcagggcaacaag
ctgcgccgcttgccttgtgcccacgagttccacatccactgcatcgatcgctggctatcc
gaaaacaacacctgtcccatctgcaggcagcctattctgtccagccatcaggaatga
DBGET
integrated database retrieval system
