Rhinichthys klamathensis goyatoka (western speckled dace): 130084064
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Entry
130084064 CDS
T09701
Symbol
ptbp2a
Name
(RefSeq) polypyrimidine tract-binding protein 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rkg03041
]
130084064 (ptbp2a)
Spliceosome [BR:
rkg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
130084064 (ptbp2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
GlcNAc-1_reg
K_channel_TID
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
130084064
NCBI-ProteinID:
XP_056105198
LinkDB
All DBs
Position
Unknown
AA seq
514 aa
AA seq
DB search
MDGIGDVAVGVKRGSDELLSGGMYNSPSSGLSSISDTTSNGSDSKKLRVEERVGDAPPSR
VLHIRKLPNDVSETEIIALGLPFGKVTNILTLKGKNQAFLELSTEEAAMTMVNYYSAVTP
HVRSMPVYIQYSNHKELKTDNSNQSGGTPTSGSNSSNGGGAPSSPVLRIIIDNMFYPVTL
DVLQQIFSKFGTVMKIITFTKNNQFQALLQFNDPTNAQQAKVALDGQNIYNSCCTLRIDY
SKLVNLNVKYNNDKSRDYTRPDLPAGDGQPSLDPSMAAALGKDSSSLLGKIPGALSPLSA
AAAAAAAAGRVALSGHTGSGGVLLVSNLNEEMVTPHSLFTLFGVYGDVQRVKILFNKKDS
ALIQMADMNQAQLAMSHLNGQKMYSKIIRITMSKHQTVQLPRDGLDDQGLTKDFTNSPLH
RFKKPGSKNFQNIFPPSGTLHLSNIPQDINEEDLRVLFSNSGGTVKAFKFFQDHKMALIQ
MTTAEEAIQCLIDLHNYNMGNNHHLKVSFSKSTI
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattggtgatgtcgcagttggtgtaaagagaggatccgatgagctgctgtcc
ggcggcatgtataacagccccagttctgggctgagcagtatcagcgatacgacatccaat
ggcagtgacagcaaaaaacttcgagttgaagaaagagtcggcgatgctccaccgtcccgc
gttctccacatccgaaagttacccaatgatgtctcggaaacagagatcattgcactcggg
cttcctttcggaaaggtcaccaatatcctcacgctgaaaggcaaaaaccaggcgtttctg
gagctcagcacagaggaagccgccatgacaatggtcaattattactcggctgtgacgcct
cacgtccgtagcatgcctgtctacatacagtattctaatcacaaagaactcaagacagac
aattcaaaccagtcaggtggtactcccacatcagggtccaactctagcaacggaggtggt
gcgccctccagtccagtactgagaataatcattgataacatgttttaccccgtcaccctg
gatgtgctgcagcagatcttctcaaagtttggcaccgtcatgaaaatcatcacgttcacc
aagaacaatcagtttcaggccctgttgcagttcaacgatccaaccaatgcacagcaagct
aaagtggctctagatggacagaacatttacaattcctgctgtacccttcggatagactac
tcaaaactcgtcaacctgaatgtgaaatacaataacgataagagcagggactacaccaga
ccggatcttcctgctggagacgggcagccctctctggatccctctatggctgctgccctg
ggtaaagactccagttccctgctcggtaagatcccaggtgccctgagcccattgagtgcg
gccgcggctgctgctgctgcggctggaagagtcgctctgtccgggcacacggggtctggt
ggagtgctgcttgttagcaatctaaacgaagagatggttacgccccacagtctgtttacc
ctcttcggagtttatggggacgtgcagcgtgtgaagattctttttaataagaaagacagc
gcactgatacagatggctgatatgaaccaggctcagcttgctatgagccatctaaacggt
cagaagatgtactcaaagatcattcgcatcacgatgtcgaagcatcagaccgttcagtta
ccgagagatggtttagatgaccagggtctcacaaaagacttcacaaactctccactgcac
cgtttcaaaaagcccggctccaagaactttcagaacatcttccctccttctggcacactg
catctgtcaaacatcccgcaagacataaatgaagaagacctcagagtccttttctccaat
tccggtggcactgtgaaagctttcaagtttttccaagatcacaaaatggccctaattcag
atgacaactgccgaagaagctattcaatgcctgatcgaccttcacaattacaacatgggt
aataaccaccacctgaaggtctccttctccaaatcaaccatctaa
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