Rhinichthys klamathensis goyatoka (western speckled dace): 130084089
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Entry
130084089 CDS
T09701
Symbol
vim
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130084089 (vim)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rkg03019
]
130084089 (vim)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rkg04812
]
130084089 (vim)
04147 Exosome [BR:
rkg04147
]
130084089 (vim)
Messenger RNA biogenesis [BR:
rkg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
130084089 (vim)
Cytoskeleton proteins [BR:
rkg04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
130084089 (vim)
Exosome [BR:
rkg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130084089 (vim)
Exosomal proteins of other cancer cells
130084089 (vim)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
DUF4515
DUF7491
TolA_bind_tri
DUF6212
Motif
Other DBs
NCBI-GeneID:
130084089
NCBI-ProteinID:
XP_056105229
LinkDB
All DBs
Position
Unknown
AA seq
455 aa
AA seq
DB search
MANRTSTSSYKRMFGGERPAMSRSTYSSRQYSSPVRTTPRVSYSSASSASPSIYASRGAR
VRTNAPLPRLATDTLDFGLADAINIEFKANRTNEKAQMQHLNDRFVSYIEKVRFLEQQNK
ILTAELEQMRGKGASRVGDLYEDEMRELRRQVDQLTNDKARVEVDRDNLGEDIERLKEKL
QEEMLQKEDAENGLRSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHDEELAELQVQI
QEQHVQIDMEVSKPDLTAALKDVRQQYETLASRNIQESEEWYKSKFADLSEAAARNNDAI
RLAKQEANDYRRQLQSLTCDLEALRGTNESMERQMREMEDNFSMEASGYQDTIGHLEDDI
RNMKDEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRITTPFPNLTSLTLRESMRE
TRPMMDNQSKKLVIKTIETRDGHIINESSQNEDDE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggccaaccgaacaagcacctcttcgtataaaaggatgttcggtggggagcgacctgcg
atgtcccggtccacttactcgagtcggcagtacagcagcccggtgcgcacaaccccacgc
gtgtcctacagcagcgcgtcctccgcgtctccatccatctacgcgagcaggggcgcgagg
gtgcgcaccaacgcgcccctgcccaggctcgccaccgatacactggatttcgggctcgcc
gacgccatcaacatcgagtttaaagccaaccgaaccaacgagaaagcgcagatgcagcat
ctcaacgacaggtttgtcagttacatagagaaagtgaggtttctggagcagcagaataag
atcttgacggcggagctggagcagatgaggggcaaaggcgcgtcccgggtcggggatctg
tacgaggatgagatgagggaactgcggagacaagtggatcagctcaccaacgacaaggcc
agagtggaggtggaccgggacaatctgggagaggacatcgagcgcctcaaagagaaactt
caagaagagatgctccagaaagaagatgctgagaacggccttcggagcttcagacaggat
gttgataacgcctcgctggcccgactggacctggagagaaaggtggagtccttacaagaa
gagatcgctttcttgaagaagcttcacgatgaggaacttgccgaactccaggtccagatc
caggagcagcatgtgcagattgatatggaagtgtccaaacctgacctcaccgccgccctg
aaagacgtccggcagcagtacgagactctggcttccaggaacatccaggaatctgaggaa
tggtacaaatccaagtttgctgacctgtcagaagccgctgcccgcaacaacgacgcgatc
cgtctggccaagcaggaggccaatgactaccgtcgccagcttcagtctctcacctgtgac
ttagaagctcttaggggaactaatgagtccatggagcgccagatgagagagatggaagat
aacttttccatggaggcatccggttaccaggacaccatcggccatctagaggacgatatc
cggaacatgaaggatgagatggcgcgtcatctacgtgaataccaggatctgctgaacgtt
aaaatggccctggatattgagatcgccacctacaggaagctgctggaaggggaagaaagc
aggatcaccacaccatttcccaacctcacatcattaacccttcgagagtccatgagggaa
accagacctatgatggacaaccagtcaaagaaattggtgataaagaccatcgagacaaga
gatggacatataattaacgagtcctcccaaaacgaggatgatgaatga
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