Rhinichthys klamathensis goyatoka (western speckled dace): 130084254
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Entry
130084254 CDS
T09701
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130084254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rkg03019
]
130084254
03016 Transfer RNA biogenesis [BR:
rkg03016
]
130084254
03012 Translation factors [BR:
rkg03012
]
130084254
04131 Membrane trafficking [BR:
rkg04131
]
130084254
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rkg04147
]
130084254
Messenger RNA biogenesis [BR:
rkg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
130084254
Transfer RNA biogenesis [BR:
rkg03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
130084254
Translation factors [BR:
rkg03012
]
Eukaryotic type
Elongation factors
130084254
Membrane trafficking [BR:
rkg04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
130084254
Exosome [BR:
rkg04147
]
Exosomal proteins
Proteins found in most exosomes
130084254
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
Gtr1_RagA
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
130084254
NCBI-ProteinID:
XP_056105475
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEITKEVSAYIKK
IGYNPATVAFVPISGWHGDNMLEPSTNMGWFKGWKIERKEGAASGVTLLEGLDSILPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGTLKAGMVVTFAPANVTTEVKSVEMHHESLV
EALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAANFTAQVIILNHPGQISQGYAPV
LDCHTAHIACKFSELKEKIDRRSGKKLEDNPKALKSGDAAIIVMIPGKPMCVESFSQYPP
LGRFAVRDMRQTVAVGVIKAVDKKAASAGKVTKSAQKAAKVK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggaaaagattcatattaacatcgtggttatcggccacgtcgattctggcaag
tccaccaccaccggacatctcatatacaaatgtggaggcatcgacaagagaaccatcgag
aagtttgagaaagaagccgctgagatgggcaagggctccttcaaatatgcctgggtgctg
gacaaactgaaggccgagcgtgagcgtggtatcactattgatatttctctctggaagttc
gagaccagcaagtactacgtcaccatcattgatgcccctggacacagagacttcatcaag
aacatgatcactggtacttctcaggctgactgtgccgtgctgatcgttgctgctggtgtc
ggtgagtttgaggctggtatctccaagaacggacagacccgtgaacatgccctgcttgcc
tacactctgggagtgaaacagcttattgttggagtcaacaagatggactccaccgagccc
ccctacagccagaagcgttatgaggaaatcaccaaggaagtcagcgcctacatcaagaag
atcggctacaaccccgccaccgtcgccttcgttccaatctctggatggcatggagacaac
atgctggagcccagcacaaacatgggctggttcaagggctggaagattgagaggaaggaa
ggtgctgccagtggtgtaactcttctcgagggcctggactccattctgccacccagtcga
cccaccgacaagcctcttcgcttgcctctgcaggatgtgtataagattggaggtattgga
actgtgcccgtcggtcgtgttgagaccggaactctgaaggctggtatggttgtgaccttt
gcccctgccaacgtgaccactgaggttaagtctgttgagatgcaccacgagtctcttgtt
gaagctcttcccggtgacaacgttggcttcaacgtgaagaacgtgtccgtcaaggacatc
cgtcgtggaaacgtggctggagacagcaagaacgacccaccaatggaggctgccaacttc
acggctcaggtcatcatcctgaaccaccctggtcagatctctcagggctacgccccagtg
ctggactgccacactgctcacatcgcctgcaagttctctgagctcaaggagaaaatcgac
cgtcgttctggcaagaagcttgaggacaaccccaaagctcttaaatctggagatgctgcc
attatcgttatgatccctggcaagcccatgtgtgtggagagcttctctcagtacccgcca
ctgggtcgttttgctgtgcgtgacatgaggcagaccgttgctgttggtgtcatcaaggct
gttgacaagaaagccgcctctgctggcaaggtcaccaagtctgctcagaaggctgccaaa
gttaaatga
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