Rhinichthys klamathensis goyatoka (western speckled dace): 130084279
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Entry
130084279 CDS
T09701
Symbol
clasp2
Name
(RefSeq) CLIP-associating protein 2 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rkg03036
]
130084279 (clasp2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rkg04812
]
130084279 (clasp2)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
130084279 (clasp2)
Cytoskeleton proteins [BR:
rkg04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
130084279 (clasp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_EF3_N
CEP104-like_TOG
HEAT
HEAT_EZ
TOR1L1_N
Cnd1
HEAT_2
HEAT_DAAF5
ParcG
MMS19_C
IFRD
UTP20
TAN
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
130084279
NCBI-ProteinID:
XP_056105521
LinkDB
All DBs
Position
Unknown
AA seq
1561 aa
AA seq
DB search
MEDNDNMDYFYQQVLQKDVTRRLQVGPDLIDYLSDPQRSLDVEQDKPRLDKTIDELTGWV
NSSNFKVALVGIDIVSAFVDRLNDRFRGYVVTVVPALVDRLGDAKDQVREQAQGLILKLM
DQATTPMNVWERLIPGFKHKNFRSREGLCFCLVATLNAFGAQPLSLSKFVPHLCSLTGDQ
NPQVREAAISSLVEVYRHVGEKVRGDLIKRDLPSARLQTILSRFDEVLNSGNMALSLSED
RSFDDDDSVDGSRPSSAQAAFKVPKVPKKPGEAPSSARRPSATGAAKTGGSKEAAGAVDE
EDFIKAFTDVPTVQIYSSRDLEDNLNKIREILSDDKHDWDHRTSALKKIRSLLVAGAADY
DCFYQHLRLLDGAFKLSAKDLRSQVVREACISVAHLSTLLGNKFDHGAEGIVPVLFNLIP
NCARVMATSGTAAIRIIIRHTHVPRLIPLIASNCTSKSVAVRRRCYEFLDLLLQEWQTHS
LERHAAVLVESIKKGIKDADSEARVEARKAYCGLQAHFPGEAESLYNALEPSYQKTLQPH
LKSSGSVASLPQSDRSSSSSQESLNRPLSKWSAAPGRVPASSKSSGSPGSLQRSRSDVDV
NAAAGAKARHGGQAGGAGRVTAGLAPGSYASLDDASDKDGRLRTKQTLSTASSMGSCQVD
SRGRTKSKITSQSQRSDDSDCTPGSQSATPVGAGSRSGSPGRVLTSTALSTLSTGAQRVS
AAPGSHRRSRIPRSQGCSRDSSPTRLSVAPSNISHIYNGSKGARGSRIPRPSVSQGCSRE
ASRESSRDTSPVRSFTPLASRHYSRSTGALHAPDAFGAAGSGLGMSQSSRLSSSVSAMRV
LNTGSDVEEALADALLLGDMRGKQKKPARRRYDTYGMYSDDDANSDASSACSERSYSSRN
GSIPTYMRQTEDVAEVLNRCASANWSERKEGLMGLQALLKNQRTLSRVELKRLCEIFTRM
FADPHSKRDPRGFGTAESGISSASFKVFSMFLETLVDFIVVHKEDLQDWLFVLLTQLLKK
MGADLLGSVQAKVQRALDVTRESFPNDLQFTILMRFTVDQTQTPNLKVKVAILKYIETLT
LQMEPQDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQSVLISLFQLNTPEFTMLLAALP
KTFQDGATKLLQNHLRNTGNTAQATMGSPLTRHTPRSPASWSSPLTSPTNTSQNTPSPSA
FDYDTENMNSEEIYSSLRGVSQAIQNFSVRSQEDMTEPARKREGDGGEEGCDQTTDSGRT
ALDNKTSLLNTMPLLSSSPRPKGEYQPVSYSDSSFSSSPFNKSLKDPDQDAECLTDDSGV
DQSEVVSELLKELSNHSERVEERKAALCELMRLIRETQLHVWDEHFKTILLLLLETLGDG
EHVIRALALRVLKEILSRQPWRFKNYAELTIMKTLEAHKDPHKEVVRAAEEGASMLATSI
SPDQCIKVLCPIIQSADYPINLAAIKMLTKVIDRLPKEGLVQMLPEIVPGLIQGYDNSES
SVRKACVFCLVAVYAVIGEDLKPHLSQLSGSKLKLLNLYIKRAQSGSSGSDQSSDLGGQG
L
NT seq
4686 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaatgacaacatggactatttttaccagcaggttttgcagaaggacgtgacc
cggaggctgcaggttggcccggatctcatagactacctgagcgacccgcagaggtccttg
gacgtggagcaggacaaaccccgcctggataaaaccatagatgagctgacgggatgggtc
aattccagcaatttcaaggttgcattggtggggatcgatattgtcagcgcattcgtggat
cggctgaatgatcgcttcagaggttatgtcgtcacagtggtgcctgcgttagtggaccgt
ctgggtgacgcaaaggatcaggttcgagaacaggcacaagggctcattttaaagctgatg
gatcaggcgacgacacccatgaacgtttgggagaggctgattcctggcttcaaacacaaa
aacttccgcagtcgagagggactctgcttttgcttggttgccacactaaatgctttcggt
gctcagcccttgagtttgagtaaatttgttccacatctctgttcgctaacaggagaccaa
aacccccaggtacgggaggcagcgatatcaagcctggtggaggtgtatcggcatgtggga
gagaaagtcagaggggacctcatcaaaagagatctaccgtctgcgcggttacagaccatt
ctgagccgttttgatgaagtgctgaattcgggtaacatggccctcagcctgagtgaagat
cgtagttttgacgacgatgactctgtggatggaagcaggccgtcgtcggctcaggctgcg
tttaaagtacccaaagtacccaagaaacccggagaagctcccagcagtgccagacgaccc
agtgccactggtgctgccaagacaggaggctctaaggaagcggcaggagctgtggatgag
gaggattttatcaaagcattcacagacgtccccacggttcagatctactcctcacgggac
ctggaggataatctaaacaagatccgtgagattctatctgacgataaacacgactgggac
catagaacaagcgcgctgaagaagatccgatctctgctggttgccggggccgcagactat
gattgtttttaccagcacctgcgcctattggatggcgcatttaagctgtcggcaaaagac
ctgcgttctcaggtggtgcgggaggcttgcatctcagtggcgcatctttccacactatta
gggaataagtttgatcatggagcagagggcatcgttccagtgctcttcaatctcatccct
aactgtgccagagtgatggctacatcgggcacagcagccatacgcatcatcatacggcac
actcatgtcccacgactaattcctctcatcgctagtaactgcacgtcgaagtctgtggcc
gtccggaggcgctgttatgagttcttggatctcctgctgcaggaatggcagactcactct
ctggagaggcatgcggcggtgttggtggagagcattaagaagggaatcaaagatgcagac
tcggaggctcgagtggaggccaggaaggcatactgtgggttgcaagctcatttccctggg
gaggcggagtctctgtataacgcattagaaccgtcctatcagaagactcttcagccacat
ctaaagagctcgggcagcgtggcgtccctcccacagtcggatcgctcgtcctccagctcg
caagaaagccttaatcgtccgctgtcaaagtggtcagctgctccaggcagagtgcctgcg
agttcaaaatcgtcaggatctccaggctctttgcagcgttctcgcagtgatgtggatgtg
aacgcagccgccggtgctaaagccagacacggcggacaggctggaggggccggtcgagtc
acggcaggcctggcccccggatcatacgcgtctctcgatgatgcctctgataaagatggg
cgactacggactaagcagactttatcgacggcatctagtatgggcagctgtcaggtcgac
tcaagagggcggaccaaatcaaaaataacatctcagtcacaacgttccgacgattctgat
tgcacgccaggatcacagtctgctacccctgtcggtgcgggttctcgctcgggttcccca
ggccgggttttgaccagtacggctctgagcacgctcagtacgggagctcagcgtgtgagc
gcggctccaggctcccaccgtcgcagcaggatccctcgcagtcagggctgcagtcgagac
tccagccccacacgcctgtctgttgctccttcaaacatcagccacatctacaatggatca
aaaggagcgaggggtagtcgtataccacggcctagcgtgagtcagggctgcagtcgtgag
gccagtcgagagagcagcagagacaccagccctgtgcgctccttcacgccgctcgcatcc
cggcattattcgcgctcaactggtgctcttcatgccccagatgccttcggggcagcaggt
tctgggttgggtatgtctcagtccagtcgtctctcatcttcagttagtgccatgagagtg
ctgaacaccggatcagacgtggaagaagccctggcagatgcgctgcttttaggagatatg
cggggcaagcagaagaaaccagctcggcggcggtatgacacctatgggatgtactcggat
gatgatgcaaatagcgacgcctccagcgcgtgttcagagcgttcgtacagctcccgaaat
ggcagtatcccaacgtatatgcgtcagactgaggacgtggccgaagtgctcaatcgctgt
gcctctgccaactggtccgagagaaaagaggggctgatgggattgcaggcgttgctgaaa
aaccagcgaactctcagccgtgttgagctgaagaggttatgtgaaattttcaccaggatg
tttgcagacccacacagcaagcgtgaccccagaggcttcggcacggcagaatccggtatc
agttctgcctcttttaaggtgttcagcatgtttctggagacacttgtggacttcattgtg
gttcataaggaggatctgcaggactggctgtttgtgctgctcacacaactgctgaagaaa
atgggagcggacctgctcggctcagtacaagccaaagtacagagagccctagacgtcaca
agagaatctttcccgaatgatctgcagttcactatcctgatgagattcacagttgaccaa
acacagacaccaaacttaaaggtgaaggtggccatattgaagtacatagaaacactgaca
ctacaaatggagccacaggattttgtcaactcaagcgaaaccagactggcagtgtctcgt
attattacgtggaccaccgaacccaagagctcggatgtcagaaaggcagcgcagtcggtg
ttgatctcgctgttccagctgaacacaccagagttcacaatgcttcttgctgcactacct
aaaacctttcaggatggagccaccaaattgttgcagaaccacctacgaaacacaggcaac
acagcccaggctacaatgggaagcccactcacccgacacaccccaagatcaccagctagt
tggtcgagccctttaacatcccctaccaacacatcacaaaacacaccttcaccaagtgca
tttgattacgataccgagaacatgaactctgaggagatctacagctccctaagaggagtc
agtcaggccatccagaacttcagcgtccgcagccaagaggacatgacagagccagcgcgg
aaaagagaaggagatggtggagaagagggttgtgatcaaaccacggactctggtcggacg
gcgttggataacaagacatctctgctaaatacaatgccactcctctcgtcgagtccccgc
ccaaaaggggaataccagccagtcagctactctgactcttccttcagctcctcccctttt
aataaaagcctgaaagatccagaccaggatgccgaatgcctcactgatgacagtggtgtg
gaccagtctgaggtggtttctgagctcctaaaggagctctcgaatcacagcgaacgagtg
gaagagaggaaagctgcgctgtgtgagctaatgcggctgatcagagaaacacaactgcat
gtttgggacgagcacttcaaaaccatcctcctgctgctcctggaaacacttggggatgga
gagcacgtcattcgggcattagcactccgggttttaaaggaaatccttagcaggcagccg
tggcgctttaaaaactatgcggaactcaccattatgaagaccctggaagcacataaagac
ccacacaaagaggtggtgcgggccgcagaagagggggcgtctatgttggcaacctcaata
agtcccgatcagtgtatcaaggtgctatgccccatcatccagtcggcagattaccccatc
aacctggctgccatcaagatgctcaccaaagtcatcgaccggctgcccaaagagggtctc
gttcaaatgctcccagagatcgtccctgggctcattcagggttatgataactctgagagc
agtgtacgaaaggcgtgtgtattttgccttgtggccgtctatgctgtcattggagaggat
ctgaaacctcacctcagccagctgtccggcagcaagctgaaactgttgaatttgtacata
aagcgagcgcagagcggctccagtggaagtgaccagtcttcagatttgggagggcagggc
ctgtag
DBGET
integrated database retrieval system
