Rhinichthys klamathensis goyatoka (western speckled dace): 130084317
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Entry
130084317 CDS
T09701
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04145
Phagosome
rkg04814
Motor proteins
rkg05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130084317
09142 Cell motility
04814 Motor proteins
130084317
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
130084317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rkg03036
]
130084317
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rkg04812
]
130084317
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
130084317
Cytoskeleton proteins [BR:
rkg04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
130084317
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
Beta-prop_EML
WD40_Prp19
WDR55
Dynein_IC2
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_SPT8
CCD97-like_C
CAF1A_acidic
Motif
Other DBs
NCBI-GeneID:
130084317
NCBI-ProteinID:
XP_056105642
LinkDB
All DBs
Position
Unknown
AA seq
628 aa
AA seq
DB search
MADKSDLKAELERKKQRLAQIREEKKRKEEEKKKKESETQQKAEAVPEDSDLDRKRRETE
ALLQSIGISPEPPLVPNPMSPSKSMSTPSETGSQDSVDGAAAGRTLQWDTDPSVLQLQAD
SELGRRTHRLGPSKITQVDFLPRELVSYCKETQTPLAAHQSEEDEEEDEEVTEPKAGAET
DLQEEEESKETKEGHPRELTEEEKQQVLHSEEFLIFFDRSIRVMERALAEDSNVFFDYSG
RDLEDKEGDLQGGSSLSLNRLFYDEHWSKHRVITCLDWSPQYPELLVASYNNNEDAPHEP
DGVALVWNMKFKKTTPEYIYHCQSPVVSVGFARFHPNLLVGGTYSGQIVLWDNRSHRRTP
VQRTPLSAAAHTHPVYCVNVVGTQNANNLITVSTDGRMCSWSLDMLSQPQESMELVYNKS
KPVAVTGMAFPTGDVNNYIVGSEEGTVYTASRHGSKAGICEMFEGHQGPVTGISCHSAVG
PADFSHLFVTSSFDWTVKLWSTKQNKPLYSFEDNADYVYDVMWSPVHPSLFAAVDGMGRL
DLWNLNNDTEVPSASVTIEGSPALNRVRWAAGGKEVAVGDSEGRVWIYDVGELAVPHSED
WTHFGHTLMEIRANRGDGEEEGPGELTT
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggctgataagagtgacctaaaagccgaactcgagcgcaagaaacagcgccttgctcaa
atcagagaggaaaaaaagagaaaggaggaagaaaaaaagaagaaagagtcagagactcaa
cagaaagcggaggctgttcctgaggactcagacttggaccgcaagcgcagggagacggag
gccctcctccagagcattggaatctcacccgaacctccattagtgccgaacccaatgtct
ccatcaaagtctatgagcacccccagcgagacgggcagccaggactctgtggatggagcg
gcagctggcaggaccttgcagtgggacactgacccctctgttcttcaactgcaggctgac
tctgagctcggacgccgaacgcacagattgggaccttctaagataactcaggtggatttc
ctgcccagagagctggtttcctactgtaaagagactcagacaccgctagcagctcatcaa
tctgaagaagatgaagaggaggatgaagaggtcacagaaccgaaagctggtgcagaaact
gacctgcaggaagaggaagaaagcaaggaaacaaaagaaggccacccgcgggagctgacg
gaggaagagaaacagcaggttctgcactcggaggagttcctcatcttctttgaccgcagt
attcgtgtgatggagagagctttagctgaggactccaacgtcttcttcgactacagcgga
cgagacttggaggataaagagggagatctgcagggcggctccagtctctctctcaatcgt
ctgttctatgatgagcactggtcaaagcatcgggtcatcacctgtctggactggtcccct
cagtaccctgagctcttggtggcctcctacaacaacaatgaagacgctcctcatgagcca
gacggtgtggctttggtgtggaatatgaaattcaagaagaccacaccagagtacatctac
cactgccagtctccagtggtgtcggtgggttttgcccggtttcatcctaacctgttggtg
ggcggcacatattcggggcagattgttctctgggacaacagaagtcacagaagaacaccg
gttcagaggactcccctgtccgccgcagcgcatacacacccagtgtactgcgtcaatgtg
gtcggcacccagaacgccaacaacctgatcactgtgtccacagatggacgtatgtgttcc
tggagcctggatatgctgtcgcagcctcaggagagcatggagcttgtttataacaagtct
aagccagtggctgtgactgggatggcctttcccactggagacgtcaataattatatagtt
ggcagtgaggaggggacagtgtatacagcgtccagacacggcagtaaagctggtatatgt
gagatgtttgagggccatcaggggccagtgacaggcatcagttgtcacagtgctgtgggc
cctgctgatttctcacacctctttgtcacctcttctttcgactggactgtcaaattgtgg
agcacaaagcaaaacaagccgctgtactcgtttgaggataatgcagactatgtctacgat
gtgatgtggtcacccgtgcacccctcgctcttcgccgccgtggacggcatgggtcgtctg
gatctgtggaacttgaacaacgacactgaggttcccagtgccagcgtgaccatcgagggc
tcccccgctctgaaccgcgtgcgctgggccgcagggggcaaagaggtcgcagtgggagac
tccgagggccgcgtgtggatatacgacgttggagagctggccgtgccccacagtgaggac
tggacccacttcggacacacactgatggagatccgtgccaaccgtggggatggtgaggag
gaggggcctggggaactgaccacgtaa
DBGET
integrated database retrieval system
