Rhinichthys klamathensis goyatoka (western speckled dace): 130084330
Help
Entry
130084330 CDS
T09701
Symbol
vps50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130084330 (vps50)
Membrane trafficking [BR:
rkg04131
]
Protein recycling
Others
EARP complex
130084330 (vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
130084330
NCBI-ProteinID:
XP_056105668
LinkDB
All DBs
Position
Unknown
AA seq
988 aa
AA seq
DB search
MQKIKSLMSRQGLKSPQESVVDMSPVQSFRSPSKEELRELREQPTDPLAEQELIDNIEEV
YFSSDSFDMVQFELGKLPPDLNLLELEEYRDKLKRQQAAVSKRVADLILEKQPSYVKELE
RVTSLQTNLQLAAVICTNARRQLRSAKEGFTEASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYNCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFEVSHYTKVQLAYKLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITTDSYIPCLTDLCKALWEVMLSYHLTMQWHDEHYKEEETTPDDS
SAEGSDESIVDRSYVKKKLEHGLTRIWQDVQLKVKAYLLGTDMSNFKYDDFIVVLDVISR
LMQVGEEFCGSKSEVLQESIKRQSVNYFKNYHRTRLEELRMFLENETWELCPVKSNFSIA
QLHEFKFMGQCRSPSVSPSRQPDSAELLELSLFEQFLQGGNPFEMQIDNKEEETEDVLAS
NGYESDELEKSVYQDYDSDSDVPEELKQDYVDEQTGDAPVKSVSRETLRSRKRSDYNLNR
ANAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGRNDMHY
QSASLPSQSSQPGVSRQIIPGYWYESSGLGLISSRLRTTLSRIQESLIDVEAGGESAGPH
VSPEERKEKVPSPHLSQLVILTASETLYGLAERVVATESLVFLAEQFEFLQPHLDTMMPS
AKKPFLQQFYSQTVSTASELRKPIYWIVAAKAIDYEQMLLLMAGVKWDIKEIMSQHNIYV
DVLLKEFEKFNQRMGDVSKIVRIPLPVSNVLWEHCIRLANRTLVEGYANVKKCSNEGRAL
MQLDFQQFLMKLEKLTDLRPIPDKEFVETYIKAYYLTENDMEQFIKNHREYSMKQLTNLV
TVCLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatcaagtctctgatgtcccgtcagggtctgaaaagtccccaggagagtgtg
gttgacatgagcccggtgcagagcttcaggagccccagcaaggaagagctgagggaactg
agggagcagcccaccgatccactggcagaacaggaactcattgacaacatagaggaagtg
tacttctccagcgactcctttgacatggtgcaattcgagctcgggaaactccctccggat
ctgaatcttctggagcttgaggagtacagagataagctgaagagacaacaagcagctgtt
tctaaaagagtggcagacctcattttggagaaacagccttcctatgttaaggagctggag
agagtgacgtctctgcagaccaacctgcagctggccgcagtcatctgcactaatgcacga
aggcagcttcgttctgctaaagaaggctttaccgaagccagccttgggctgttggccaat
cagagacgccgacagctgttgacaggattgctgaagtctttgaggaccataaagactctg
caaagaactgatgttcgactgagtgaaatgctagaggaggaggactatccaggcgccatc
cagctgtgtttggaatgccaaaaggccgccagcacattcaagcactacaactgtataagt
gagttgaattccaaactgcaagacacgctggagcaaatcgaggaacaactagatgtggcg
ctgtccaaaacctgcaagcactttgaggtttctcactacaccaaagttcaactggcatat
aagcttctgggcaagacgcagacggccatggatcagttgcacatgcacttcacccaggcc
atccacaacactgtcttccaggtggtgctgggatatgtagagctgtgcgccggcaacgcc
gataccaagttccagaaaatgcagtacaaggacctttgcacgcacattaccacagacagc
tacatcccctgcttgaccgacctctgcaaggccttgtgggaggtgatgctcagttaccat
ctaaccatgcagtggcacgatgagcactacaaagaagaagagaccactcctgatgattcc
agcgcagagggctcagatgaatccatcgtggaccgcagctatgtgaaaaagaagctggaa
catggtttaacgcgaatctggcaggacgtccaattgaaagtgaaagcctatttgctggga
acagacatgtccaacttcaagtacgacgacttcattgtggttctggatgttatcagcagg
ttgatgcaggtgggagaggagttctgcggcagcaagtccgaggtgttgcaggagtccatt
aagagacaaagtgtgaactacttcaagaactatcaccgaactcgcctggaggagttgcgg
atgtttcttgaaaatgaaacctgggagttgtgccctgtgaagtccaacttcagtattgcc
cagctccacgagtttaagttcatgggtcagtgtcgttctccctcagtatctcccagcagg
cagccggactccgcagagctgctggagctgtctctgtttgagcagttcctgcagggagga
aatccttttgagatgcagatcgacaacaaggaagaggagaccgaggatgtcctggcttct
aatgggtacgagtcagatgagctggaaaagagcgtgtatcaggactacgacagtgacagt
gatgtacctgaggagctgaaacaagactatgtagatgaacagacaggagacgctccagtg
aagagcgtgtccagagagacacttcgtagccggaagaggtccgactacaatctgaaccga
gccaatgcccccatcctcaccaacaccaccctcaacgtgattcgcctggtcgggaaatac
atgcagatgatgaacattctgaagcccattgcctttgatgtcatccactgtgtgtctcag
ctctttgattactacctgtatgccgtctacaccttctttggccgcaatgacatgcactac
caatctgcatctctgccttcacaaagctctcaacctggtgtgtccagacagataatccct
ggttattggtatgaatcctctgggctgggtttgatcagcagcagactgaggactacgctc
agccgaatccaggagagcctaatagacgtggaggctggaggggagagcgcaggtcctcat
gtgtctcctgaggaaaggaaggagaaggttcccagtcctcatctcagtcagctggtgatc
ctgacggccagtgagacgctctatggtttggctgagagagtcgtcgccactgaatcacta
gtttttctggcggagcagtttgagttcctccagcctcatctcgacaccatgatgccttca
gccaagaagcccttcctccagcagttctactcacagactgtatctacagccagcgagctc
cgcaaacccatttactggattgtggcggccaaagccatagattacgaacagatgctgtta
ctgatggctggagtgaaatgggacattaaagagataatgtcacagcacaacatctatgtg
gatgtccttttaaaggagtttgagaagttcaaccaaagaatgggagatgtgtcgaaaata
gtccggattcctctgcctgtgtccaatgtcttatgggagcactgcatccgtctggccaac
aggacattagtggagggctatgctaatgtgaagaaatgcagtaatgaaggacgtgcactg
atgcagctggacttccagcagttcctgatgaagctggagaagctcaccgacctcagacca
attccagacaaggagtttgtagagacctacattaaagcatactacctaactgagaacgac
atggagcagttcatcaagaaccacagggagtactctatgaagcagctgactaacctggtc
accgtctgcctcgggtcccacatcaacaagaaagcacgacagaaactcctcgcagcgatc
gatgacattgatcggccgaaaagataa
DBGET
integrated database retrieval system
