Rhinichthys klamathensis goyatoka (western speckled dace): 130084341
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Entry
130084341 CDS
T09701
Symbol
sfpq
Name
(RefSeq) splicing factor, proline- and glutamine-rich isoform X1
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rkg01009
]
130084341 (sfpq)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rkg03021
]
130084341 (sfpq)
03041 Spliceosome [BR:
rkg03041
]
130084341 (sfpq)
Protein phosphatases and associated proteins [BR:
rkg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130084341 (sfpq)
Transcription machinery [BR:
rkg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
130084341 (sfpq)
Spliceosome [BR:
rkg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
130084341 (sfpq)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
130084341
NCBI-ProteinID:
XP_056105682
LinkDB
All DBs
Position
Unknown
AA seq
618 aa
AA seq
DB search
MSRDRSRNRGGFQHRGRGGMGMGMRGGMGNPNFRNQNQHPYQNRGHHMGGGFKPNQGNQP
NQAPITPKPQESKPVVQSPPAQGPGLAQQSNNKGPSPQQTAIAAPPKIQSPPQIQSPPQI
QSPPPQKIQSSPQIQSPPPQNNAKTPDLGSPQNQIRKNQPKGGVGNGQKQPVPMQKEPEK
MLPPQQQSNTSNEGSQPQELKATLSLLRKPGEKTYTQRCRLFIGNLPNDITETEFRKLFA
KYGEPSEIFINQSKGFGFIRLESRALAEVAKAELDDIPMKGRPLRVRFATHSAALSVRNL
SPFVSNELLEEAFSQFGVVERAVVIVDDRGRSTGKGIVEFSSKPAARKAIDRISDGVFLL
TSSPRPIVVELLEQYDDEDGLPEKLAQKNPSYQKERDQPPRFARPGTFEFEYSQRWKSLD
EMEKQQRQQVEKNIREAREKLEGEMEDAYHEHQANMLRQDLLRRQEELRRMEEMHSQEMQ
KRKEMQLRQEEERRRREEEMMRQRELEEQMRRKREESYRMGGFMDNREREMRMNSSGGLG
LADMPFGSPGQKFPLAGMNFEGHQGMGGSAPGGMASNEMRNERFPQGGPGGPRGMGAGNP
GFGRVREEYDGAAKKPRF
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtgaccgctcccgtaaccgtggaggattccagcatcgaggccgcggaggaatg
ggaatgggaatgcgtggtgggatgggaaaccctaactttcgaaatcaaaaccagcatcct
tatcaaaaccgaggacaccatatgggtggtgggtttaagccgaatcagggaaaccagccc
aaccaggcccctataacaccgaagccgcaggaatccaagccagtggtccagtcacctcca
gcacaaggccctggtctggcccagcaaagcaacaacaaaggcccttcgcctcaacagacc
gccatcgccgctccgccgaagatccagtctccgccgcagatccagtctccgccgcagatc
cagtctccaccgccacagaagatccagtcttcaccacaaatccagtctccaccgccacag
aataacgcgaaaaccccagatctcggttccccacagaaccagatcagaaagaaccagcca
aaaggtggagtggggaatggtcaaaaacagcctgttcccatgcagaaagaaccggaaaag
atgctaccaccgcaacaacagagtaacacgagcaacgaaggctctcagcctcaggaattg
aaggcaacgctatctttgctgcgcaagcctggggagaaaacctacactcaacgctgccgt
ctgtttattgggaacctaccgaacgacatcactgaaaccgaattcaggaaattgtttgca
aagtatggggaacccagtgagattttcatcaatcaaagcaaaggttttggattcatcagg
ctggaatcccgtgctttggcagaggttgcaaaagctgagctggatgatattccgatgaaa
ggcaggcctctcagagttcgttttgccactcattctgctgcactttctgtgcgcaactta
tctccatttgtgtccaatgagctgctggaggaggccttctctcagtttggagtggtggag
agggctgtagttatcgtagatgaccgtggccgctcaacggggaagggcattgttgagttt
tcttccaaaccagctgcacggaaggctattgatcgtatcagtgatggagtgttccttctc
acatcgtcaccccgtccgattgtggttgaattgttagagcagtacgatgatgaggatggt
ttgccagagaaacttgcacagaagaaccccagttatcagaaagagcgagatcaacctcct
cggtttgcccgtcctggcacctttgagtttgaatactcacagcgatggaagtcccttgat
gagatggagaaacaacagaggcagcaagtggaaaaaaacatacgtgaggcccgtgaaaag
ctggaaggggagatggaagatgcctatcatgagcatcaagcgaacatgctcagacaggac
cttcttagacgtcaagaggaacttcgtcggatggaagaaatgcacagtcaggagatgcag
aaacgtaaagagatgcaactcaggcaggaagaggaacgccgtaggagagaggaggagatg
atgcggcagagggaacttgaagaacagatgaggcgtaaacgtgaggagtcttacagaatg
ggtggcttcatggataatagagaaagggagatgagaatgaattctagtggaggcctgggg
ttggctgatatgccgtttgggtcacctggccagaagttcccattggcaggaatgaatttt
gaaggacaccaaggaatggggggatctgcaccagggggcatggcgtccaacgaaatgcgc
aatgagcgtttcccacaaggtgggcctggtggtccaaggggcatgggtgctggaaaccca
ggatttggcagggtccgtgaggaatatgatggagctgccaagaagcctcgcttctga
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integrated database retrieval system
