Rhinichthys klamathensis goyatoka (western speckled dace): 130084678
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Entry
130084678 CDS
T09701
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
rkg04054
]
130084678
Pattern recognition receptors [BR:
rkg04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
130084678
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
FISNA
PRY
NOD2_WH
LRR_6
SPRY
Motif
Other DBs
NCBI-GeneID:
130084678
NCBI-ProteinID:
XP_056106054
LinkDB
All DBs
Position
Unknown
AA seq
1014 aa
AA seq
DB search
MKSDVSMDPPPKFSDGAVTPDPEVMRDDVIRSVTCSDSDCQAFIRQRVKEQHKASMKNKY
ERLFEGTKRQENQTLLNRIYTQLYIIEGESEGVNEEHEVLQMEKTARTQDTAIFCNDIFN
PLHQPVCWEKDKIKTVLTKGIAGIGKTVSVQKFILDWAEGKANQDVDCMFVLPFRELNLI
KDHQYSLHRLLLDFHPELQDLDSKIYEECKVVFIFDGLDESSMTLMFTDDEKVCDVNESS
SVGVLMSNLIRGELLPSALIWITSRPAAANQIPSKYINRLTEIQGFNEPQKEEYFRKRIS
DEHQASRIISHIRRSRSLHIMCHIPVFCWISATVLQNLLKQDDSTEIPQTLTEMYIHFLL
TQINMRNQKYDERNPEKLLKSNRDVIVKLAELAFKQLMKGNVIFYEEDLIESGIDVTDAS
VYSGICTEIFKEESVIHQRKVYCFIHLSFQEFLAALYLFYCHFFKNKKSLQSFLNKRYQR
YSRINSLYELLKAAVSESLQSENGHLDIFLRFLLGISLESNQRLLKDLLTHTVNKSETIM
KITHYINNKIKDDDCLSADRSINMFLCLLEMKDQTMYREIQQFLKSENHSVNRLSPSHCS
TLAYILQISEEVLDEFDLKKYNTSDEGRRRLIPAVLNFRKALCADCNLTDQCCESLSSSL
QSSNSLRELDLSHNYLQDSGVKLLCNGLKSVHSHCQLNILRLAECNLTDQCCESLSSSLQ
PSNSSLRELDLSNNDLQDSGVKLLSDGLKSSHCQLNILRLSGCMVTEEGCCFLASSLSLN
PSHLRELDLSYNHPGQSLLKLLSDPNYRLDKLNVDHGGEFRITTGQQKYASDLTLDLNTV
NTHLALSERNRKVTHVEKKQSYPDHPERFNKCYQVLCREGLSGRCYWEAEWSGREVYVSV
TYKGINRKELSNDCVFGYNENSWSMNCFYNGFTVKHNDKITVISVPSRRSNRVGVYLNWS
AGTLSFFSVSDTHTLTHLHSFNSTFTEPLYAGFGVYSGSSVSLCEIKQLSVRNN
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtgacgtatccatggatcctccccctaaattcagtgatggagcagtgactcct
gaccctgaagtaatgagagatgatgtgatcagatcagtgacctgctctgactctgactgt
caggccttcatcaggcagagagtcaaagaacaacacaaagccagcatgaagaacaagtat
gagagattatttgagggaacaaaacgacaagagaatcaaaccctcctgaacaggatctac
acacagctctacatcatagaaggagagagtgaaggggtgaatgaagaacatgaggtttta
cagatggagaaaacagctagaacacaagacactgcaatcttctgcaatgacatctttaac
cccttacatcaaccagtatgttgggagaaagacaaaatcaagactgttcttactaaaggc
atcgctggaattggaaaaactgtctctgtgcagaagttcattctggactgggctgaggga
aaagccaatcaagatgtagattgtatgtttgtgcttccatttcgagagctgaacttgatt
aaagatcaccagtatagtcttcacagacttctgctggactttcatcctgaacttcaagat
ctagactcaaaaatttatgaggagtgtaaagttgtgtttatctttgatggtctggatgaa
agcagcatgacactgatgttcacagatgatgagaaagtttgtgatgtgaatgagtcttca
tcagtgggtgtgttgatgtcaaacctcatcagaggagagctgcttccctctgctctcatc
tggatcacctccagaccagcagcagcaaatcagatcccctccaaatacatcaaccgtttg
acagaaattcagggattcaatgagcctcagaaggaggaatatttcaggaagagaatcagt
gacgagcatcaagccagcagaatcatctcacacattagaagatcaagaagccttcacatc
atgtgtcacatacccgtcttctgctggatctctgccactgtgcttcaaaacctcctgaaa
caagatgacagtacagaaatccctcaaactttgactgaaatgtacatccacttcctgctg
actcagatcaacatgaggaatcagaagtacgatgagagaaatccagagaagctcctgaag
tccaacagagacgtgattgtgaaacttgccgaactggcgttcaaacagctgatgaagggc
aatgtgattttctatgaggaggacctgattgagagcggcatagatgtcactgacgcctca
gtgtattctgggatttgcactgagatctttaaggaggaatctgtgattcatcagaggaaa
gtctactgcttcattcatctgagctttcaggagtttctagctgctttatatctgttttac
tgccattttttcaagaataagaaatcactgcagtcgtttctgaataagagatatcagcgc
tacagtcggataaactctttgtatgagttattaaaagcagcagtttctgaatccttacag
agtgaaaatggacacctggatattttcctgcgattcctgctgggcatctcattggagtcc
aatcagagactcttaaaggatcttctgacacacacagtgaacaaatcagagaccatcatg
aaaatcacacattacattaataacaaaattaaggatgatgattgtctctcagcggacaga
agcatcaatatgttcctctgtctgctggaaatgaaggatcagacgatgtacagagagatt
cagcagtttctgaagtcagaaaatcactcagtgaatcgactctctccatctcactgctcc
acattagcctacattcttcagatatcagaggaggtgctggatgagtttgatctgaagaaa
tacaacacatcagatgaaggtagaaggagactgataccagctgtgctgaacttcagaaaa
gctctttgtgctgactgtaatctcactgatcagtgctgtgaaagtttgtcttcatctcta
caatcatcaaactcactgagagagctggacctgagtcacaattacctacaggattcagga
gtgaagttgctctgtaatggactgaagagtgtccattcacactgtcaactcaacatactg
agacttgctgagtgtaatctcactgatcagtgctgtgaaagtctgtcttcatctctacaa
ccatcaaattcctcactgagagaactggacctaagtaacaatgacctgcaggattcagga
gtgaagctgctctctgatggactgaagagttcacattgtcaacttaacatactgagatta
tctggctgcatggtgacagaggaaggttgttgttttctggcttcatctctgagtttaaac
ccttcacacctgagagagctggatctgagctacaatcacccaggacaatcattgctcaag
ctgctctctgatccaaactatagattggacaaactcaatgtggatcatggaggagagttc
aggattacaacaggacaacagaaatatgcaagtgatctcacactggatttaaacacagta
aacactcatctcgctctgtctgagaggaacaggaaagtgacacatgtggaaaagaagcag
tcgtatcctgatcatccagagagatttaataagtgttatcaggttctgtgtagagagggt
ctgtctggacgctgttactgggaggctgaatggagcgggagggaggtttatgtatcagtg
acatataaaggaatcaacaggaaagaattgagtaatgactgtgtgtttggatacaatgaa
aactcctggagtatgaactgtttttataatggtttcactgtcaaacacaatgacaaaatc
acagtaatatctgtcccttcacgtcgctctaacagagtaggagtgtatctgaactggtcg
gccggcactctgtcctttttcagcgtctctgacacacacacactcacgcacttacacagt
ttcaacagcacattcactgaacccctctatgctggatttggggtttattctggtagttca
gtgtctctgtgtgagattaagcagctttctgtgagaaacaactga
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