Rhinichthys klamathensis goyatoka (western speckled dace): 130084736
Help
Entry
130084736 CDS
T09701
Symbol
atg2a
Name
(RefSeq) autophagy-related protein 2 homolog A isoform X1
KO
K17906
autophagy-related protein 2
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04136
Autophagy - other
rkg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130084736 (atg2a)
04136 Autophagy - other
130084736 (atg2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130084736 (atg2a)
03029 Mitochondrial biogenesis [BR:
rkg03029
]
130084736 (atg2a)
Membrane trafficking [BR:
rkg04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
130084736 (atg2a)
Mitochondrial biogenesis [BR:
rkg03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
130084736 (atg2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
130084736
NCBI-ProteinID:
XP_056106150
LinkDB
All DBs
Position
Unknown
AA seq
2031 aa
AA seq
DB search
MSRWLFPWSGSIKKRACRYLLQHYLGHFLEERLSLDQLSLDLYNGSGVISEINLDVWAVN
ELLESLGAPLEIVEGFVNTITVTIPWAALVTEHCTLEVTGLQITCRPKYRTNGNWDSQGW
SSCMTSSMQLAQECLKDPPEASEEPPAPLEGLEMFAQTIETVLRRIKVTFLDTIVRVEHH
SLDAEAGVALEMRIKRVDYCDEAVRDSNQTVPVDIHQPPAFLHKILQLNSVQLLYETLGG
SQGLIHSDVMASSRETDKTDENDEDDDASDAPQSLHPTQKPPEPLLIGQCSGFIETTVKI
KQNEMLPGPKFELDGKVGCLHLLLSPSQITQLTDLLSSLCIETSEGSGGGGGGGGLSGGG
VSRPLGSDDLRLIEEDLSKQLNTEMYDRDLELDSEPYISTMVNGDMFYSMGPGYMTSSML
STRSGSELSDSDMDSSIHSQSSLAQTNPLSPQGMLNCPRRYPVPGSLSSLPQCSRPPKRS
SRDGQSEPMKPDSLLRLSLGGVTLTLLEQDPPPGPDGLSSLAEVSKLFFRELAFFKDSMF
SERDFQNLRGSFAKACAHSHIRVTGAAVQLACEMRSAGRHIRATTSDLSFSRLELLECLW
DSGGPQYTELLQFQSAGVFTMGTTARPCAQFHHSLSEKHMRKSGSRRRVVRRDSSLRVEL
GELSSELDLDILGRLEDILQALSYCPSPPQRNAAHAAESLLLELHSSLLLQSPYTVLKVR
FPIPDLRPPGLRRPLSQRAVRSEILSLQISNLELKSQQGSDVQQDGPCNPGAKLTKLLEA
CFTDLHGVYEGWEGEAFPCIRVQKSPDPQNPDGIPRIQVRVNEGVGSDGVGVCEGVNRDL
GLGSMSLENPCELREKNSSPFSSNRTMFETEEMVIPADPEEMEEFQSQCICQCQYVVDIT
FPVAYILLPSKEAFLSIYNRINNDLLMWEPPPPPPCPPPAPPSSFQSSRSSSHQHRPEED
EFYLCKSAFRLESDSEEEEPEFYSAKQSKRRKHLEPQSSHALSLLCLTVLIGKGRLQAMT
DSKNEAGRKVDLCHGELILDLEGGKIFSVTQHQNNPNLNFLTIESKRVELYHKAEVPDSP
IPVKLEMPRFTSPGHLDLTIYPTEVGVSSVGGRETGVQMLSTAIQITLDLERNVKEFVVA
LRLHGATLRHHMALTNHSWHEQIIDFLDVIDDDILGYTPPAVITVLHTHLATCAVDYRPL
YLPLRVLFTAESFSLSSNIIVDTATFHLRFILDDSALYLSDQCESDTVDLRRDYVCVLDI
DLLELAITTWKGSDSSKLTQPLFELRCSNNVVHVHTCADSCAALVNMLQYLVSQGDLHPP
PRHTSPTEIAGQKLLLSESPASLPSCPPAETAEINQCDLTDALIDTERILQEETQDSGSP
SIRRASPVSVYLFPGEAPKLRPSVLEGEESDIDGLVTTALEAHADIMSEEGSEGSTDNDD
FCILEAPGMGIPPRDGEPVVTVLSQGLIKVRDGYYSRPRGSSDLLRAPARFPVPQNRVVL
REVSVVWHLYGGKDFGGKPSSAHTPHSHKVRSAASGARGSPSRSAVPSRPQNSWRWVGGS
GRQHTLLMEIQLTKVSFQHETYPVVTPPAAGLDAEGPCLGEQPISRQVFIVQELEVRDRL
ASSQINKFLYQYTSESMPRRAHSNMLTVKALQVIPESGLGGPECCLRVSLLPLRLNIDQD
ALFFLKDFFSSMAAGVNPYLPVDPAAEGKTDTPQKASDDTDPASGLGHDLAASVETTFSE
QSSSSAGSSSSSDQPIYFREFRFTSEVPIWLDYQGKHVVIEQGTFAGILIGLAQLNCSEL
KLKRLCCRHGLLGVDKVIQYAVNEWLTDIRKNQLPGILGGVGPMHSVVQLFHGVRDLFWM
PIEQYRKDGRIIRGLQRGAASFGTSTASAALELSNRLVQAIQATAETVYDILSPTPPLTR
YITEGRPTPRPRRTPQPADLREGVAKAYDTVREGVIDTAQTLCDVASRGHEQKGLPGAVG
GVLRQIPPTVVRPLIVASEATSNLLGGMRNQIKPDARKEDFLKWRTEVGQE
NT seq
6096 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggtggctcttcccctggtcgggctcaataaagaaacgggcctgtcggtacctc
ctgcagcactatctgggccactttttggaggagagactcagtttggaccagctgagcttg
gacctgtacaatggcagcggggtcattagtgaaattaacctggatgtgtgggcggtgaac
gagttgttggagtcgttgggagctccgctggagattgttgaaggttttgtgaacaccatt
acagtgactattccctgggcagcacttgtgacagaacactgcacccttgaagtcactgga
ttgcaaataacatgcagacccaaatacagaaccaacgggaactgggattcccaagggtgg
tcgtcatgcatgacgtccagcatgcagctggcccaggagtgcctgaaggacccgcccgag
gcgtcagaagagccgcctgctccactggaggggctggaaatgtttgcacagaccatcgag
acagtcctacgtcgaataaaagtcaccttcctggacactatagtgcgagtagaacaccat
tccctggacgctgaggctggggttgccttagagatgcgcattaaacgggtggattattgt
gatgaggctgtgagagactcaaaccagacagtgcctgtagacatccaccagccaccagcc
ttcctgcacaagatccttcagctcaactccgtgcagctgctctacgagaccctgggagga
tcacaggggctgattcattctgatgtcatggcgagcagcagggagacggataagacagat
gaaaatgatgaagatgatgatgcctccgatgccccgcaatcattgcatcccacccagaag
ccccctgagcctctgctgattggacaatgctctggattcatagagacaacagtcaaaatc
aaacaaaatgaaatgctgcctgggcccaagtttgagttggatggtaaagtagggtgtctc
cacctgctgctgtcccccagtcagatcactcagctgacagacctcctgtcctccctctgc
atcgagacatcagaaggcagtggtggtggtggtggtggtggtggtctgtctggtgggggt
gtttctaggcctctgggttctgatgatctgcgattgattgaagaggatcttagtaagcag
ctgaacacagaaatgtatgacagagacctggagttggactcagagccctatatcagcacc
atggtgaacggagacatgttttattcaatgggtcctggctatatgaccagcagtatgttg
tcgacacgctccgggagtgaattatctgacagcgatatggactcgtccattcatagccag
agcagcctggctcaaacaaaccctctgtctccacagggaatgctcaactgtcctcgtcgt
tatcctgtaccaggatccttatctagtttgcctcaatgtagcagacctccaaaacggtcg
tctcgagacggtcaatcagagccgatgaaaccagattcgttgcttcgcctctcattgggt
ggagtcaccctgactcttttagagcaggacccgcctcctgggccggatgggctctcctca
ttggctgaggtgtcaaagttgtttttccgtgagcttgcgttctttaaggacagcatgttc
agcgagagagactttcagaacctgagaggaagctttgctaaagcatgtgcccactcccac
atcagggtgaccggtgcagcagttcaacttgcatgtgagatgcgtagcgcagggcgacac
atccgagccacgacctccgacctctccttcagcaggctggaactgctggagtgcctgtgg
gactcgggtggtccgcagtacacagaacttttgcagttccagtcagccggtgtcttcacg
atgggcaccactgccagaccctgtgcccagttccaccacagtctatctgagaagcacatg
cgtaagagtggaagcaggcggcgtgtggtgcgcagagacagctcgctgcgggtcgagctc
ggggagctcagctctgagttggaccttgacattctgggccgactggaggacatcttgcag
gccctgagctattgtccatcgccaccacaaagaaacgcagcacatgctgcagagtctctt
ttgttggagctccactcttctctcctgcttcaatctccttacaccgtgctgaaggtccgt
ttccccatccctgaccttcgacccccggggctgaggcggcctttaagccagcgggcagtg
cgaagtgagatcttgagtctgcagatctctaatctggagctgaagtctcagcaggggtca
gacgttcagcaggacggcccctgcaacccaggagccaaacttaccaaactactagaggcc
tgtttcaccgatctgcacggagtgtatgaaggctgggagggagaagcatttccctgtatc
cgtgtgcagaagagcccagatccgcagaaccctgatggcattcccaggattcaggtgcga
gtgaatgagggagtgggatctgacggtgtgggtgtgtgtgaaggggtgaacagggatctg
gggctgggctccatgtctctggagaacccatgtgaactacgagagaaaaacagctctccc
ttctcatccaatcgtaccatgtttgagacggaagagatggtgatcccagctgacccagag
gagatggaagagtttcagtctcagtgtatatgtcagtgtcagtatgtggttgatatcacg
tttcctgtagcttacatccttctgcccagtaaagaggcttttctgagtatctataacagg
attaataatgatctgttgatgtgggagcctcctccacctcctccgtgccctcctcctgct
cctccttcttcttttcaaagttctcgtagttcctcccaccagcacagacctgaagaggat
gaattttacctctgtaaatctgcattcaggctggaatctgactctgaggaagaggagcct
gagttctactcagccaagcaatcaaaaagaaggaaacacttagagcctcagtccagccac
gcactgagtctgctctgtttaacagtgctgattggaaaaggccgccttcaagccatgaca
gacagcaagaatgaagctggacgtaaagtggacctctgtcatggagaactaattttggac
ttggaaggggggaagatttttagtgtgacgcaacaccagaacaatcccaatctcaacttc
ctgaccatagagagcaaaagagtggagctgtatcataaagcggaggtgccagactcccct
attcctgtgaaactggaaatgcccaggttcacttccccaggtcatctggaccttaccatt
taccccacagaggtgggggtgagcagcgtcggtggccgagaaaccggcgttcagatgctg
tcaactgccattcaaatcacattagatcttgaaaggaatgtcaaggagtttgtggttgcg
ctgcgactccatggtgctactttacgacatcacatggcgttgaccaatcacagctggcat
gagcagattattgatttccttgatgtcatcgatgatgacattttaggctacaccccacct
gccgtcatcacagttcttcacacacacctggccacctgtgcagtggactacaggcctctt
tatcttcctctgcgagttttgtttacagctgagtccttttctttatccagcaacatcatt
gtggacaccgcaacctttcacctcaggtttatcttagacgactctgcgttgtacctgtct
gatcaatgtgaaagtgatacggtggatttgaggcgagactatgtttgtgtattagacatt
gatctgctggaactggccataacgacttggaaaggatctgactcaagtaaactgactcag
ccgctgtttgagcttcgttgttctaataatgtagttcacgtacacacctgtgcggactcg
tgcgctgctctagttaacatgctgcagtacctggtttcccagggcgatctacaccctccc
cctcgccacacatcccccacggagatcgccggacagaaacttctgctgtcagaaagtccc
gcatcccttccctcctgcccaccagcagagaccgcagagattaaccaatgcgacctcaca
gatgccttgattgacactgagagaatccttcaggaagagacgcaagattctggttctcct
tccatccggcgagcctcacctgtctccgtctatctgttcccgggagaagcccctaagctc
cgcccctctgttctagaaggggaggagtctgatattgatggactggtcaccacagctttg
gaagctcatgcagatattatgtcagaggaaggctcagagggttccaccgacaacgatgat
ttctgcatcctagaggctcctgggatgggcatcccacctagagacggtgagcctgtggtg
accgtgctctcccagggtcttataaaggtgcgggatggatactactctcggccacggggc
agttcagatctgctacgcgccccagcccgtttcccagtgcctcagaacagagtggtgctc
cgagaggtgtccgttgtctggcacctgtacggtggcaaagactttggcggcaaacccagc
tcagcccatacaccacacagccataaggttcgctcagctgcttctggagcccgtggttct
ccctctcgttcagcagtgccctcacggccccagaactcttggcggtgggttggaggaagt
gggcggcagcacacactgcttatggaaatacaactgacaaaggttagtttccagcatgag
acgtacccagtggtgacgccccctgctgcaggactggatgcagaaggaccatgcctcggg
gagcagcctatttcccgccaggtgtttatcgtccaggaacttgaggtgcgagaccgtctg
gcttcctctcaaatcaacaagttcctgtaccagtacaccagtgagagcatgccgcgcaga
gcccactccaacatgttgacagtgaaagcgctacaggtgattcctgaatcaggtctgggc
ggcccggagtgctgtctgagagtcagtctgttaccgctgcgtctcaatatcgaccaggat
gcacttttcttcttgaaggactttttcagtagcatggctgcaggagttaatccttactta
cccgtcgaccctgcagctgagggcaagactgacactcctcagaaggcttcagacgacaca
gatcctgcctctggattgggccatgatctcgctgcatctgtagaaacaacctttagtgag
cagagttcctcctccgctggctcctcgtcctcctctgaccaacccatctacttcagagag
tttcggtttacctctgaagttcccatctggctggactatcaaggaaagcatgtagttatt
gagcagggaacgtttgcaggcattcttattggtctggcccagctgaactgctctgaactg
aagctgaagagattgtgctgtagacatgggctgctgggtgttgataaggtgattcagtac
gcagtgaatgagtggcttactgacatcaggaagaaccagctgccggggattctgggaggt
gtaggtcccatgcattctgttgtacagctcttccatggtgtacgtgatctgttctggatg
cccattgagcagtaccgaaaggacggacgcatcatccgaggcctccagaggggggcggca
tcattcggcacctctacagcctctgctgccctagagctcagcaacagactagtgcaggca
attcaggccaccgctgagacagtgtacgacatcttatctccaaccccacctctgacacgt
tacatcactgagggacgccccactccccgtcccagacgcacccctcaaccagctgacctc
agagagggtgtggccaaggcctatgacactgtcagagagggtgtgattgacaccgctcag
actctatgtgatgttgcgtctcgtggacatgagcagaaaggtcttcctggagcagtgggc
ggggttttgcgccagatcccgcccactgtggtccgtccacttatagttgcctccgaggcc
acttcaaacctactgggaggaatgcggaaccaaattaaaccagatgcgcggaaagaggac
ttcttaaaatggcgcaccgaagttggccaagaatga
DBGET
integrated database retrieval system
