KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130084779
Entry
130084779         CDS       T09701                                 
Symbol
kdm3b
Name
(RefSeq) lysine-specific demethylase 3B isoform X1
  KO
K15601  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65]
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rkg03036]
    130084779 (kdm3b)
Enzymes [BR:rkg01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     130084779 (kdm3b)
Chromosome and associated proteins [BR:rkg03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    130084779 (kdm3b)
SSDB
Motif
Pfam: PWWP_KDM3B Tudor_KDM3B JmjC DUF7030 Cupin_2 DUF5779
Other DBs
NCBI-GeneID: 130084779
NCBI-ProteinID: XP_056106225
LinkDB
Position
Unknown
AA seq 1789 aa
MGDSLGLIGKRLLLLLNDGSSASAAGVGTDPAAWLRGTVRAVSVIGLASPGVEVFVEFEK
SPWRQRSWVQVYGDEVRAVLVESAIVWVNCSDPSLSLPSALTAAATQWPALMFKPLVDRV
GLGSVVPVEFFGPRTLSFLPNGNSLHTFETEKDFRHSLLQEKPALQAAISSWHSDSELQE
ILRKGSYTIQGRRVQVYQPEFGEPWALGLVSQHDPVSHIMEITMDQGEETQVVDPRVIHV
MLAVEQSDESQDRRKKEGDGGKGEGSRRRRTASEGDEDITLKRFKGAGEGASDSQNGNGS
NKDAEAMVTRVEMPAEVVVERKDGGGGVGGRVSSTCSPVAFPNQDSSNNTNSSQQDHSHI
RSTSFVKENGSFVPNQERISSVSAVLPASTPTPPPLKPAPSPFSNTFPSLGQMPSLVPGA
PAPKSSPTLPASEREEGGVLSGYPKTAALVSPGPVTISSPSQDNASSVALSVPGDANQKP
SMWGSTPEASQTPKTLALAAAVFGKQSSEFGDVPTQTNGSSQEDKPFGFPFGAAKEPHRQ
NADPSKNLFFQCMSQNQSITQGQAKAFTSLSECLNKEPPSLFKPSAPSEGFRKAVVASAS
AGLFGSAPASGLTPLKEQPKVPDIKPAGNGLMNKPFGGVVEAHGKLPATFPSAICQAASS
AEVLKPSLGLGTSGLGSASGGIRNVNSSSPVSGFGLLAGNKASETHENLFLQASKETNPF
LAYGGAVSHSPFSSLSTPKSSSSLSASAVSPSGSTSVLSQDPPGNEAKPNLFTMAEPPKG
ILTPQFAPPALMTTPSFTSVAQDGQQTSKASKEGSDVSTGTHLSTEGQGVAMPFDQTKFS
LEERGQSTKRDSESSSNSDLSDLSEGEDNSSQKPGVAAANEDKNKTLPAPKGRPRNKPFK
VGQSVLKDQSKVRRLKQSGESFLQDGSCINVAPHLHKCRECRLERYRKSREQDSDDDDPN
VACRFFHFRRLAFTKKGILRVEGFLSPQQSDSMAMGLWLPSLAVHEGLDLDTSKYILANV
GDQFCQLVMSEKEAMMMVEPHQKVAWKRAVRGVREMCDVCETTLFNIHWVCRKCGFGVCL
DCYRLRKNRPPEVDDSPDEEVFSWLKCAKGQPHEPQNLMPTQIIPGTALYSIGDMVHSAR
GKWGIKANCPCISRHNKPLVRPSAPNGLSQSSTAHTSGNGASTTSATTRPNGESAAGVVV
KTEPVEEAGSGDTTSSTSGTNSSASSPPAAPTPAAKDSKASSSALHWLADLATQKEPKES
LRSMMSRDPRTPFGLDSFSTLPKPSGSNPKLFNSLLLGAGPSQPKAEGTSLRDLLNYGPG
KLPQGPTEGGVPFPSVFSTAGQADKMKGGLPNFLDHIIASVVETKKAEGRRVSGSAEGGE
SGTVPRREGMMGLSVLDPHTSHSWLCDGRLLCLQDPSNTNNWKIFRECWKQGQPVLVSGI
HRRLKGNLWKPEAFSLEFGDQDVDLVNCRNCAIISDVKVRDFWDGFQVISKRLQGGDGQP
MVLKLKDWPPGEDFRDMMPTRFDDLMDNLPLPEYTKRDGRLNLASRLPNFFVRPDLGPKM
YNAYGLISTEDRKVGTTNLHLDVSDAVNVMVYVGVPEGESEQEKEADLAGFKEVMLTIEE
GDVDDMTKKRVYEIKEKPGALWHIYAAKDAEKIRELLRKVGEEQGQENPPDHDPIHDQSW
YLDQTLRRRLFEEYGVQGWSIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKH
CFRLTQEFRHLSNTHTNHEDKLQVKNIIYHAVKDAVGTLKAHEPKIGRS
NT seq 5370 nt   +upstreamnt  +downstreamnt
atgggggactcgctcggtttgatcgggaagcggctgctgctgctgctcaatgacgggagc
tccgcgtctgccgcgggcgttgggacggatccggcggcctggctccgcggcaccgtccgg
gcggtcagtgtgatcgggctggcgagcccgggggtggaggtgttcgtggagtttgagaag
agcccttggcggcagcgctcatgggtgcaggtgtacggggacgaggtgcgtgcggttctc
gtggagagtgccatcgtctgggtcaactgcagcgacccttccctctcccttccctcggct
ctaacagcggctgctactcaatggccagccttgatgttcaaaccgctggtcgaccgtgtg
ggtttgggatctgtggttcctgtcgagttctttggaccaagaactttgtcgtttctccct
aatgggaattcactgcacacatttgagactgaaaaagattttagacactctctgctacaa
gagaagccagcgcttcaagctgccatcagcagttggcacagtgactctgagctgcaggag
atcctgcgcaaaggatcttacactattcagggtcggagagtacaggtgtaccagccggag
tttggggagccctgggccctgggactcgtgtctcagcatgatcctgtttcacacattatg
gagattaccatggaccagggtgaggagacacaagtggtcgatccgcgggttattcatgtg
atgcttgctgtggaacaatcagatgagagccaagatagacgcaagaaggagggtgatggt
gggaaaggtgagggcagtcggcggcgccggacagcgtctgaaggagatgaagacattact
ctcaaacgtttcaaaggagccggggagggtgcctctgacagccagaatgggaatggctcc
aacaaggacgctgaggctatggtaacacgtgtagagatgccggcagaggtagtagtggag
agaaaagacggagggggtggcgtaggtgggagggtgtcgagcacctgtagtccagttgct
ttcccaaaccaagactcctctaacaacaccaattcttctcagcaggatcactcccacata
aggagcacaagttttgtcaaggagaatggcagttttgtcccaaaccaagaacggatatct
tcagtgtcagcggtgcttcctgcgtccactccaacaccacctccattgaagcctgcccca
tcgcctttttctaacacttttccttctttggggcaaatgcccagtttggtgcccggggcc
cctgcccccaagtcatctcccacactcccagcatctgagagggaggagggaggtgtcctt
tcagggtatcctaaaacagctgccctggtgtctccaggtcctgtgaccatttcgtcgcct
tcccaagacaatgcttcaagtgtggctctttctgttcctggagatgcaaaccaaaagccc
agtatgtggggatcaaccccagaagcaagccagacccccaagacccttgctctggctgcc
gcagtatttggtaaacagtcaagtgagtttggagatgttcccacacagacaaatggttct
tcccaggaggacaagccttttggctttccctttggagctgcgaaggaaccgcacaggcag
aacgctgatccctcaaagaacctgttctttcaatgcatgtctcagaaccagagtatcaca
caaggccaggcaaaggccttcacatccttgtccgagtgcctgaacaaggagccgcctagc
ctgttcaagccttccgctccctccgagggtttcagaaaggcggttgtggcttctgcatct
gctggactgtttggttcagcacctgctagtggcctgacaccactgaaagagcagccaaaa
gtgcctgatatcaagcctgcaggcaatgggctgatgaacaagccttttggaggggttgtg
gaggcacacggaaaactcccagccactttcccctcagccatctgtcaagctgcgagctct
gcggaggtgctgaaaccctctttgggattaggaaccagtggacttggaagtgccagtggt
gggattagaaatgttaacagctcgagcccagtcagcggcttcggtttgcttgctggcaac
aaggcttcagaaactcacgagaacctgttcctacaggcgtcgaaggagacgaatccattt
ctcgcttatggtggagctgtttcgcacagccctttcagttccttgtcaactccaaagtca
tcctcttccctgtccgcatctgctgtttcaccttcaggcagcaccagtgtacttagtcaa
gatcctcctggtaatgaggccaaaccaaatctgttcaccatggcagaacctcctaaggga
atcttaactccccagttcgcccctcctgctctcatgaccactccgtcattcacatcggta
gcccaggatggacaacaaacgtccaaagcaagcaaagagggttcagatgtcagcacggga
acccacctctccactgaaggccaaggtgtcgctatgcccttcgaccaaaccaagttttcc
ttggaggaacgtggtcagtccaccaaaagggattcagagtccagtagcaacagtgacctg
tctgatttgagcgagggggaggacaactcgagccagaaacctggggttgctgcagccaat
gaggataagaataagaccctgcctgcgcctaagggccggccacggaacaaaccctttaaa
gtgggacagtccgtgttgaaggaccagagtaaggttcggcgcttgaagcagtccggagag
tccttcctgcaagacggctcttgcattaacgtggctccccacctgcacaaatgccgcgag
tgccgtctggagcgctaccggaaatcccgcgagcaggactcggatgatgatgacccaaac
gtggcctgccgattcttccactttcgcaggctggctttcactaagaagggaatccttcgt
gtggaaggtttcctgagcccgcagcagagtgacagcatggcaatggggctgtggctgccc
tccctcgcggtacatgaaggacttgacctggacacgtccaaatatattttagcaaacgtg
ggtgaccagttttgccaattggtcatgtcagagaaagaggctatgatgatggtagagccc
catcaaaaagtggcatggaagcgagcggtgaggggagtgagagaaatgtgcgatgtgtgt
gaaacgacactgttcaacatccactgggtgtgtcgcaaatgcggcttcggtgtttgtctt
gactgctaccggctacgcaagaacagaccaccggaagtagacgacagtcctgatgaagag
gtgttctcatggctgaagtgtgctaaaggccagccacacgaaccacagaacctcatgccc
actcaaattatacccggcacagccttgtacagcataggtgacatggtacactcagccaga
ggtaaatgggggatcaaagcgaactgtccctgcattagtcgacataacaaacccttggtg
cggcccagtgctccaaatggcctttcacagtcgagtacagctcacacttcggggaatgga
gccagcaccacttcagccacaacccgccccaatggggaatctgcagcaggtgtagtggtc
aaaacagaacctgttgaagaggcgggcagtggtgacacaacatcaagcacgagtgggaca
aacagcagcgcgtccagccctcctgctgccccgacaccagccgcaaaagatagcaaagcc
agttcctcagccctgcactggctggctgacctggccacgcaaaaggagcctaaagagtct
ctgcgttccatgatgagtcgtgaccctcgcactccgtttggcctggactccttcagcacc
cttcccaaaccctcggggtccaaccccaagctcttcaatagtctgctgctgggtgctggg
ccatcccaacccaaagcagagggtactagcctccgagatctgctgaactatggccctgga
aagctcccgcaaggtcccacagagggaggagtccccttcccttcagtgttctccactgct
ggtcaggctgataaaatgaagggaggtcttcctaatttcctggatcatatcattgcatca
gtagtagagacaaagaaggcagagggtcggcgtgtgtcggggtcagcagaaggcggcgag
tctgggactgttcctcgcagagaggggatgatgggcctcagcgtactcgacccccacacc
tcccactcctggctgtgtgatggccgtttactctgcctgcaggaccccagcaacaccaac
aactggaagatcttcagagagtgctggaaacaaggacagcctgtgctggtctcgggcata
cacaggaggctgaagggtaacttatggaagcctgaggctttcagcctggagtttggagac
caggatgtagacctggtcaactgtaggaactgcgccatcatctctgatgtcaaagtccga
gacttttgggatggcttccaggtcatttccaaacggttacaaggtggagatggccaacct
atggtactaaaactcaaagactggcctcctggagaagatttcagagacatgatgcccact
cgatttgatgatctcatggacaaccttcctctgccagagtacacaaagagagacggccgt
ctcaacctggcttctcgtcttccaaacttcttcgttcggccagatctgggccctaaaatg
tacaatgcctatggtctgatctccacagaagacaggaaggttggcaccactaacctgcat
ctggacgtatccgatgcagttaacgtaatggtgtatgtgggtgtcccagaaggagaaagt
gaacaagaaaaggaagcagacctcgctggatttaaagaggtgatgctgaccattgaagag
ggagatgtggatgacatgactaagaaaagagtctacgagatcaaggagaaacctggagct
ctctggcacatctacgccgctaaagacgccgaaaagatccgcgagctcctgcgaaaggtt
ggagaagaacaaggacaagagaacccaccagaccacgatcctatccatgaccagagctgg
tacctggaccagacgctgcgtcgcaggctgttcgaggagtatggggtccagggctggtcc
attgtgcagtttttgggagatgccgtgttcatcccagctggagcgccacatcaggtgcac
aatctgtacagctgtatcaaggtcgcagaggactttgtttctcctgaacacgtgaagcac
tgttttagactgacgcaagagttccggcacctttccaacactcacactaaccacgaggac
aagctacaggtgaagaacatcatctaccatgctgtgaaggatgctgtgggaacactaaag
gcccatgagcccaagataggtcgctcttag

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