Rhinichthys klamathensis goyatoka (western speckled dace): 130084791
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Entry
130084791 CDS
T09701
Symbol
ssrp1a
Name
(RefSeq) FACT complex subunit SSRP1a
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130084791 (ssrp1a)
03036 Chromosome and associated proteins [BR:
rkg03036
]
130084791 (ssrp1a)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
130084791 (ssrp1a)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
130084791 (ssrp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
HMG_box
POB3_N
SSRP1_C
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
130084791
NCBI-ProteinID:
XP_056106246
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
MGDTLEFNDIHQESKGSWNDGRLRFSKQSVVYKSHKTGKVDSIPGPELSAAQWRRVCLGH
GIKLVTSTGHIYKYDGFKDTDFEKISAFFKANYKLELAEKDMCVKGWNWGTAKFSGSLLS
FEVSESPVFEIPLSSVSQCATGKNEVTVEFHQNDDAEVSLMEVRFYVPPNTGDDGTDPVE
AFAQNVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPSFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDLSLALNMNEDEVEKRFE
GKLSKNMSGPLYEIVSRVMKALVNRKITVPGNFQGHSGSQCITCAYKASSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQKNQFTFSNIEREEYGKLFDFVN
AKKLNIKNRGFKEGMKGAEGYSDSDEDQHDAYLERMKQEGKIREEGEGSDESEGDSDESF
NPGEEDDDVPEEYDSNASESVSEGEDGDSEDEGKKKKVEKKPKKVVKEKKERKPRREKKV
KDAAAPKRPMSAYMLWLNGNRERIKSENPGISVTEISKKAGEMWKLLGKDRKEEWDKKAE
EAKKQYVKAMEEYKKSGGGGGAASVSKEKKKKGGKVEAKKKSVVEKEKKKEGGNESFKSK
EFISSEESSSESDHDRSGKRKASDDEEEEAASTPASSEESGSD
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgggagacactctggagtttaatgacatccatcaagagtcgaagggatcttggaacgat
ggccgtctgaggttcagcaagcagtctgtggtctataaaagccacaaaacggggaaggtg
gacagtatcccggggcccgaactctctgccgcgcagtggcgtcgggtctgcctgggtcac
gggatcaaactggtcaccagcactggacacatctacaaatacgacggcttcaaagacaca
gattttgagaaaatctcagcgtttttcaaagcgaactacaaattggagttggcagagaag
gatatgtgtgtgaagggctggaattggggcaccgccaaattttcagggtctctgctgtca
tttgaggtgagcgaaagtcctgtctttgagatcccgctgtccagcgtatcccagtgtgca
acgggaaagaacgaggtgacggtggagttccatcagaacgatgatgcggaggtgtcactc
atggaggtccgcttctatgtcccgcccaacactggagacgacggcacagaccccgtggag
gcattcgctcagaatgtcctctcaaaggcagacgtcatccaagctactggagatgccgtg
tgtatctttaaagaacttcagtgccttacgccgagaggaaggtatgatattcgtatctac
ccctccttcctgcacttgcatggcaagacttttgactataagatcccctacaccactgtc
ctgcgtctcttcctgctgccacacaaggaccagaggcagatgttctttgtgatcagtctc
gacccgcccattaagcagggtcagacacgttatcatttcctcatcctcctcttctccaaa
gatgaagacctcagtcttgctctcaacatgaacgaggatgaggtggagaagcgttttgaa
gggaagctcagtaagaacatgtctggtccgctctatgagattgtcagcagggtcatgaag
gctctggtcaacaggaagatcacagtgcctggaaacttccagggtcactccgggtctcag
tgtataacatgtgcgtacaaggcgagctcagggctgctgtatcctctggaaagaggcttt
atctatgtgcacaagccaccggttcacctgcgcttcgaggagatctcctgcgttaacttc
gccagaggaacaaccaccactcgctcctttgactttgaaatagagactaagcagaaaaac
cagttcaccttcagcaacattgagagggaagaatatggaaagcttttcgactttgtcaat
gccaagaaactgaacatcaagaacagaggatttaaagagggcatgaaaggagcagaaggc
tacagtgactctgatgaagaccagcatgacgcttacttggagaggatgaaacaagagggc
aagatcagagaggagggagaaggcagcgatgaatccgagggcgatagcgatgagtctttc
aaccctggagaagaggatgacgacgtcccagaagagtatgacagtaacgcttcagagagt
gtcagcgagggagaggatggtgacagtgaagatgaaggaaagaagaaaaaagttgaaaag
aagcccaagaaagtggtgaaagagaagaaagagagaaaaccacggagagagaaaaaggtg
aaagacgcagctgctcctaagaggccgatgagcgcttacatgctgtggctgaacggcaac
agagaacgcatcaagagtgagaatcctgggatatcagttactgaaatctccaagaaggct
ggagaaatgtggaagctgctgggcaaagaccggaaagaggagtgggacaaaaaagcagaa
gaggccaagaaacaatatgtaaaagccatggaggagtacaaaaagagtggagggggagga
ggagcggcatctgtttctaaggaaaagaaaaagaaaggagggaaggtggaagcgaagaaa
aagagtgtagtggaaaaggagaaaaagaaagaaggtggaaacgagagctttaagagcaaa
gagttcatctccagcgaggagagctcatctgaatctgaccacgacagaagcggcaaacgc
aaggcttctgatgatgaggaagaggaagccgcctccacaccagccagctcagaggagtca
ggatctgactga
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integrated database retrieval system
