Rhinichthys klamathensis goyatoka (western speckled dace): 130084817
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Entry
130084817 CDS
T09701
Symbol
nr3c1
Name
(RefSeq) glucocorticoid receptor
KO
K05771
glucocorticoid receptor
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130084817 (nr3c1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130084817 (nr3c1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
rkg03310
]
130084817 (nr3c1)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
130084817 (nr3c1)
Nuclear receptors [BR:
rkg03310
]
3. Estrogen like
3C. 3-Ketosteroid receptor
130084817 (nr3c1)
BRITE hierarchy
Motif
Pfam:
GCR
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
130084817
NCBI-ProteinID:
XP_056106280
LinkDB
All DBs
Position
Unknown
AA seq
744 aa
AA seq
DB search
MDQGGLKNGAKRDGRLNTLDYSNSPVEGILRSGIQSAMSVAPTSMVPQPSPLMQPVSADL
PNGLSNSPTLEEHTTSTLGFFMEDSELKAVGKEQRAQQQQALCSFTLGDSFSGLEASIAD
LNSSSPSMDSMIGGVDPNLFPLKTEQFSPMDKCDMDLDQDSFGPMGKDVDVGNHKLFSDN
TLDLLQDFELDGSPSDFYVADDAFLSTIGEDALLGDLSTNTERDSKATISVNSTLNGMST
SSTTTTSLATVKVEKDSIIQLCTPGVIKKENVGGTNYCQIGLHSTPINICGVTTSSGQSF
LFGAGPSTAAVSQQKDQKPIFNVYTPLSSSEDSWSRGQGFGNASGMQQRASECFSKNYTS
PYARPEDSTATPSAVGKSGTGIHKICLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNY
LCAGRNDCIIDKIRRKNCPACRFRKCLMAGMNLEARKTKKGRQTGKVIQQPTIPERNLSP
LPEARALVPKPMPQLVPTMLSLLKAIEPETIYAGYDSTIPDTSTRLMTTLNRLGGRQVIS
AVKWAKALPGFRNLHLDDQMTLLQSSWLFLMSFGLGWRSYQQCNGNMLCFAPDLVINEER
MKLPYMNDQCEQMLKISNEFVRLQVSNEEYLCMKVLLLLSTVPKDGLKSQTVFDELRMSY
IKELGKAIVKREENSSQNWQRFYQLTKLLDSMHDMVGGLLNFCFFTFVNKSLSVEFPEML
AEIISNQLPKFKAGSVKALLFHQK
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaggaggactgaagaacggcgccaagagagatgggcgtttgaatacgttggat
tacagcaacagcccagttgagggaattttacgaagcgggatacaaagcgccatgtctgtc
gctcccacgtccatggttcctcaacccagtccactgatgcagccagtttccgcggacctt
cccaatggcctgagcaattcacccactctagaggagcacaccacttccactcttggcttc
ttcatggaagattcagaactcaaagcggtcgggaaggagcagagggctcaacaacaacag
gccctgtgctctttcactttgggggacagcttctcaggtctggaggccagcattgcagac
ctcaatagctcctccccttcaatggactccatgatcggtggagtcgaccccaatctcttt
cctttaaaaacagagcaattttctcccatggataaatgcgatatggatcttgaccaagat
tcctttggtccaatggggaaagatgttgatgttggcaatcataagctatttagtgacaac
actctggacctcctgcaggactttgagttggacggatcgccttctgatttctatgtggca
gatgacgcgtttctctccaccataggtgaagatgctctgctcggagacttgtcgacaaat
acagagagggactcaaaggccacgatctcggtaaacagcacgctcaacggcatgagcact
tccagcaccaccactaccagcctggccactgtgaaagtggagaaggactctataatccag
ctgtgtactccaggggtcatcaaaaaggagaacgtcggtgggactaactactgtcagatt
ggtctccacagcacacctattaacatttgtggtgtcaccacttcaagtggacagagcttt
ctctttggggccggcccgtccacagctgctgtcagtcagcagaaagatcagaagcctatc
tttaacgtgtacacccctctgagctcttcagaagacagttggagcaggggccagggcttt
gggaatgcaagcggaatgcaacagagggccagcgaatgcttttccaaaaactacacaagc
ccctatgccagacctgaagacagcactgccacaccctcggctgttggaaagtccggcact
ggcatacacaagatctgtctggtgtgctcggatgaagcttcgggctgccattatggagtc
ctcacctgtggaagctgtaaagtcttctttaagagagcagttgaagggcaacacaattac
ctgtgcgctggacggaacgattgcatcattgacaaaatccgccggaagaactgccctgcc
tgtcgtttccgcaaatgcctcatggcaggcatgaacctagaggcccgtaaaaccaagaag
gggcgtcaaacaggcaaggtaatccagcagccgacgattccagagcgcaatctttcccca
ctgcccgaggcccgggcactggtacccaaacccatgcctcagctggtgcccaccatgctg
tcactactaaaggccattgagccggaaaccatctatgccggatacgacagcaccatacct
gacacgtccacccgcctcatgaccactctgaacaggctgggcggccggcaagtcatctct
gcggtcaaatgggccaaagctctgccaggcttccggaaccttcacctggacgatcagatg
accctcctgcaaagttcctggctgttcctcatgtcttttggactaggttggagatcatac
cagcagtgtaatggaaacatgctgtgtttcgcaccggacctagtgatcaatgaagagagg
atgaagttgccctacatgaatgatcagtgtgaacagatgctgaagatctccaatgagttt
gtgagactgcaagtgtccaatgaggagtacctgtgcatgaaagtccttctgctcctgagc
acagtaccgaaggatggtttgaagagccagacagtgtttgatgagctacgaatgtcttac
attaaagaactgggcaaggccattgtgaagagagaggagaactccagccagaactggcag
cgattctatcagctcactaagctactggactcaatgcacgatatggtgggtggactcctg
aacttctgtttcttcacgtttgtgaataaatccctcagcgtggagtttcccgaaatgctt
gcggagatcatcagcaatcagttaccaaaattcaaagccgggagtgtcaaggcgctgctc
tttcaccagaagtga
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