Rhinichthys klamathensis goyatoka (western speckled dace): 130084830
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Entry
130084830 CDS
T09701
Symbol
dpf2l
Name
(RefSeq) D4, zinc and double PHD fingers family 2, like isoform X1
KO
K13196
zinc finger protein ubi-d4
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130084830 (dpf2l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rkg03041
]
130084830 (dpf2l)
03036 Chromosome and associated proteins [BR:
rkg03036
]
130084830 (dpf2l)
Spliceosome [BR:
rkg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
130084830 (dpf2l)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
130084830 (dpf2l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DPF1-3_N
PHD
PHD_4
zf_RING_Vps8
PHDvar_NSD
zf-C2H2
zf-C2H2_4
ESR1_C
zf-H2C2_2
Motif
Other DBs
NCBI-GeneID:
130084830
NCBI-ProteinID:
XP_056106301
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
MATAVENIVKVLGEQYYKDALEQCHSYNARLCAERSILMPFLDSQTGVAQSNCYIWMEKR
HRSAGTAPGQLYTYPARRWRKKRRAHPPEDPALVFPPLKSAELELGLKKDVLGPLDGSSL
EALLKGEPLDKRVPTELRPPEEETSLSEITGTSTASSHSGSTRIRKRILEPEEYLDDLDD
EDFEEETPKRRGKGKSKGRGVGNGKKKMEAAAAAQEERDKPYACDICGKRYKNRPGLSYH
YTHSHLADEEGEDKEEPEIHTPAPQEEPKTPKKGPNGLALPNDYCDFCLGDSNMNQKTGQ
SEELVSCSDCGRSGHPSCLQFTAVMMAAVKTYRWQCIECKCCNVCGTSENDVSLRTLSLK
QTPYTENHLLMCLNPLSQDQLLFCDDCDRGYHMYCLSPPMSDPPEGSWSCHLCLALLKDK
ASIYQSQNTAME
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgccgtggagaatatcgttaaagtacttggagaacagtactacaaagatgct
ttggagcagtgtcatagttataacgcccggctgtgtgccgagaggagcatcctcatgccc
ttcctggactcccagactggagttgctcaaagcaactgctacatttggatggagaagaga
cacaggagcgcaggtacagcaccaggacagctgtacacatatcccgcccggcgctggagg
aagaaaagaagagctcacccaccagaagaccctgctctagtttttcctccactcaaatct
gctgagctggagctgggcctgaaaaaagatgtgttgggcccgttggatgggagcagtctg
gaggccttgctgaaaggagagccgctggataaaagagtgcccacagagctcagaccacct
gaggaagaaaccagtctgtctgagatcactggaaccagcacggccagcagccacagtggc
tccacacgcatcaggaagaggatccttgagcccgaagaatacttggatgatctggacgat
gaagattttgaggaggaaactccaaaaagacgaggaaaagggaagtctaagggtcgagga
gttgggaatggaaaaaagaaaatggaagctgctgcagctgcccaggaagaacgagacaaa
ccgtatgcttgtgacatctgtgggaaacgctataagaacagaccaggcttgagttaccac
tacactcactctcacctggctgatgaggagggagaagacaaagaagaacctgagattcac
acccctgcaccacaagaggaacccaagacccctaaaaaaggaccaaatggcctggcatta
cccaatgactattgcgacttctgcctgggtgactccaacatgaaccagaaaacaggccag
tctgaagagctggtgtcctgctctgactgtggacgttcaggacatccttcgtgcctgcag
ttcactgccgtgatgatggcagctgtaaagacttaccgctggcagtgcattgagtgcaag
tgctgcaatgtttgtggcacatctgagaatgacgtgagtctccgcacattatcactcaaa
caaaccccttatacagaaaaccatctgttaatgtgtttaaatcctctttcccaggaccag
cttttgttctgtgatgactgtgacagaggataccacatgtactgcctcagccctcccatg
tcagaccctccagaaggaagctggagttgccacctgtgtctggctcttctgaaggacaag
gcctccatttatcagagccagaacaccgcaatggagtga
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