Rhinichthys klamathensis goyatoka (western speckled dace): 130084839
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Entry
130084839 CDS
T09701
Symbol
ppargc1b
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X1
KO
K17962
peroxisome proliferator-activated receptor gamma coactivator 1-beta
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
rkg03029
]
130084839 (ppargc1b)
Mitochondrial biogenesis [BR:
rkg03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
130084839 (ppargc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
EDRF1_N
Motif
Other DBs
NCBI-GeneID:
130084839
NCBI-ProteinID:
XP_056106312
LinkDB
All DBs
Position
Unknown
AA seq
855 aa
AA seq
DB search
MADCASLLDEELSSFVFNYLTENSGSQYGEEEVCSDRLDADFPDFDLSQLDASDFDSVNC
LSELHWCNEHSDHSPASIQYSAGDPELFEEENAALLAALTDSLDGIVEDGVGGLSVFPSL
GDDPEEGEEEEDDLPLDSEHFPGSLSPETEEPSLLKKLLLSPPNVPAGLESHKDGSVHRH
SSRNQHVKPVRPVLKKGKSSTQERKPRPVRPTGRLCTELHRHLTTAREAEDTEEEEEEDE
EDSDSEEEEEESSSSESESMVCIEPPKPQFSSEKELHSVVELIKYMHTYCLPIRKQASWD
RKEREALARKTKPESSQVPRGLPQSSQRPAPQTSSGTRPRVPFTRRRETKAHSLLKEMLE
AVSSFDVSKPYRMHSPPYIHCRGAATRPGADVSSSPARQPKAEAKDSDCESLHKATKRPK
SPEPEEGSFSVRRSRRLASFPSRFAKKVRENCGRLEPIAGQSREEENVVKHPPTEPPSDS
SQKTNSHKAFEGHYPSSRDEKRSCLCLPLASKSNGDTQYANKPFEQTLCVELCGTAGLTP
PTTPPHKPVEDELFKPDGKAELTTKSSCLARAHIRKLPEQTELYAQLRRMGQTGDTDSKG
GMQRGYGDHDYCLLGLGESRKRMAAALGSQCHVEVGEKEEDEMDVKNWEIEGQEERLLTN
VPDYQPTTEDESTTALFTPSPEQTSEPSPVRSPTPDLDAQSPVSCSPPSPSCKLPFSDES
SETCHEATEKRSKTKCGQENDVNKCQVIYIHNLPSSVTQSMLRKRFEAFGLPEDCKVVIK
TDERCGVITLRPTQNGQTSRHRWDSLGPSGGNGSRRFGRKRYIDLDEAGPGPVKSKYDAL
DFDALLKEAQRSLHR
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggcggactgcgcttcactgttagatgaggagctctcttcatttgtcttcaattatttg
actgaaaactccggaagccagtatggggaagaggaggtctgctcagaccgccttgatgct
gacttccctgactttgacctctcgcagctggacgccagtgattttgactcagtgaactgc
ctcagtgagctgcattggtgcaacgagcactcggatcactctcctgcatccatacagtac
agtgctggagacccagagctatttgaggaagaaaatgcggcactgctcgctgccctcaca
gacagcctggacggcattgttgaggacggagtcgggggtctgtctgtgttcccttcccta
ggggacgaccctgaggagggcgaggaggaggaagatgatctccctttggacagtgagcac
ttccctggctcactgagcccagagacggaagaaccatctctactaaaaaagctcctgttg
tcgccccctaatgtgcctgcgggcctcgagtcgcacaaagacggcagcgtgcatcgccat
agcagcaggaaccagcacgtcaagcccgtgaggcccgtgctgaagaagggcaaatcaagc
acacaggagcgtaagccacgaccagtgaggcccaccggccgtctttgcactgaactccac
cgccacctcaccaccgcacgggaggccgaggacacagaggaagaggaagaggaggatgaa
gaggacagtgactcggaggaggaagaggaggagtcatccagcagcgagagtgagagcatg
gtgtgcattgagccaccgaagcctcagttctcctcagagaaggaactgcactcagtagtg
gagctcatcaaatacatgcacacatactgcctgccgatacgcaaacaggccagctgggat
cgcaaagagcgtgaggctttggcacgaaagaccaagcccgagagctcgcaggtcccacgt
ggccttcctcaaagctctcagagaccggctccccagaccagcagtgggaccaggccgagg
gtgcccttcactcgccgcagggaaaccaaagcccactccctgctcaaggagatgctagag
gcagtcagttcctttgacgtaagcaagccttacagaatgcacagccccccttatatccac
tgcagaggggctgcgactcggcccggcgctgacgtttcttcctcccctgcacgtcagccc
aaagctgaagctaaagactcagactgtgagagcttgcataaggccacaaagcgccccaaa
agcccagagccagaggaaggctccttttcagtcaggcgttctcgccggctagcctccttc
cccagccgattcgctaagaaagtccgtgagaactgtgggcggttggagcctattgctggg
caatccagggaagaggagaacgtggtcaaacatcctcccactgagcctccttctgatagc
agccagaagaccaactcccacaaggcttttgaaggccattacccatccagcagggacgag
aaacggtcctgcctctgtctgccgctggcatccaaatccaatggagacacgcagtatgcc
aacaaaccctttgagcagactctctgtgtggaattgtgtggcacagcaggcctgactccc
cccaccacaccccctcataaaccagtggaggatgagctcttcaaaccagacggaaaagct
gagctcaccaccaagagctcgtgcctggcgcgggcgcacatacgcaagctcccagagcag
acagaactgtacgcccagctgcgtaggatgggccaaacgggcgacacagactctaaaggt
gggatgcaacgtgggtacggggaccacgattactgcctattgggcctgggagagagtcgc
aagagaatggctgcggcactcggctctcagtgccatgtggaagtgggggagaaggaggag
gatgagatggatgtgaagaactgggagattgagggacaggaggagaggctcctaacgaac
gtccctgactaccagccaacgactgaggatgaatcgaccactgcgttgttcacgcccagt
ccagagcagaccagtgaaccctcacctgtccgttctcccaccccagacctggacgcccag
tccccagtttcctgttcgcccccgtcacccagctgcaaactccccttcagcgatgagagc
tcagagacatgccacgaagcaactgaaaaaaggagcaagacaaagtgtggacaagagaat
gatgtgaacaagtgccaagtgatctacattcacaaccttccgagcagcgtcactcagtcc
atgctgcgtaagcgcttcgaggccttcggccttccagaggactgtaaagtggtcatcaaa
accgacgagcgttgtggagtgatcacactgaggcccactcagaacggccagacctcacgg
cacaggtgggactcgcttggtccgagcggagggaacggcagccggcggtttggcaggaag
cgttatatagatctggatgaggcgggtccaggtccggtgaagagcaagtatgatgcactg
gactttgacgctctgctgaaagaggcccagagaagcctgcatcgctga
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