Rhinichthys klamathensis goyatoka (western speckled dace): 130084919
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Entry
130084919 CDS
T09701
Symbol
sox1b
Name
(RefSeq) transcription factor Sox-1b
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130084919 (sox1b)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
130084919 (sox1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
130084919
NCBI-ProteinID:
XP_056106428
LinkDB
All DBs
Position
Unknown
AA seq
340 aa
AA seq
DB search
MYSMMMETDLHSPGAQTNTNTGHTGPNSKVNQDRVKRPMNAFMVWSRGQRRKMAQENPKM
HNSEISKRLGAEWKVMTEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYS
LAGGLLAGSGGGGGMGLGMGMGAAGVGQRLDSPVGHGGSTAASYAHMNGWTNGAYSGQVA
AAAAAAAMMQEAQLAYSQHPGSGAHHHHGHHHHPHNPQPMHRYEMTALQYSPISNSQSYM
SASPSGYGGISYAQHQNSSVASSGAIGALGSLVKSEPSVSPPVTAHARAPCPGDLREMIS
MYLPTPEGGDPSVQSRLHAVPQHYQSSTTSVNGTVPLTHI
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatgatggagacggacttgcattctccaggagcccagactaacactaac
acgggccacacgggacccaacagcaaagttaaccaagaccgcgtcaagagacctatgaac
gcgttcatggtgtggtctcggggtcagcgcagaaaaatggctcaggagaatccaaagatg
cacaactcggagatcagcaagcgcctcggagcggagtggaaagtcatgactgaggcggaa
aagcgacccttcattgacgaggcgaaaagactgcgcgccatgcacatgaaggagcatccg
gattacaagtaccgaccccggaggaagaccaagacgctgctcaagaaggacaagtactct
ttggcgggtggcctgctcgctggatcagggggcggaggcggcatggggctggggatgggg
atgggtgcagcgggggtcggccagaggttagacagtccggtgggtcacggtggcagcacc
gcggcgagctacgcgcacatgaacggctggaccaacggcgcgtactcaggccaggtggcg
gctgccgcggctgctgccgcaatgatgcaggaggctcagctcgcctacagtcagcaccca
ggcagcggagcgcatcaccaccacgggcaccaccaccatccccacaacccccagcctatg
caccgctacgaaatgacggctctccagtacagccccatctcaaactctcagagctacatg
agcgcctcgccgtcaggctatgggggaatatcctacgcgcaacatcaaaactccagcgtg
gcttcatctggggccatcggcgcgctgggctcgctggtcaaatcggagccgagcgtaagc
cctcccgttaccgctcacgctcgagccccttgtcccggagacttgcgcgagatgataagc
atgtatttaccgacgccggagggaggggacccgtccgttcagagcagacttcacgctgta
ccgcagcactatcaaagctccacgacgagcgtaaacggaaccgttccactgacacacata
tga
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integrated database retrieval system
