Rhinichthys klamathensis goyatoka (western speckled dace): 130085127
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Entry
130085127 CDS
T09701
Symbol
nfatc1
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 1 isoform X1
KO
K04446
nuclear factor of activated T-cells, cytoplasmic 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04010
MAPK signaling pathway
rkg04020
Calcium signaling pathway
rkg04148
Efferocytosis
rkg04218
Cellular senescence
rkg04310
Wnt signaling pathway
rkg04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130085127 (nfatc1)
04310 Wnt signaling pathway
130085127 (nfatc1)
04020 Calcium signaling pathway
130085127 (nfatc1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
130085127 (nfatc1)
09143 Cell growth and death
04218 Cellular senescence
130085127 (nfatc1)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
130085127 (nfatc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130085127 (nfatc1)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
130085127 (nfatc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Motif
Other DBs
NCBI-GeneID:
130085127
NCBI-ProteinID:
XP_056106674
LinkDB
All DBs
Position
Unknown
AA seq
869 aa
AA seq
DB search
MKSAEEDAYGYSQNTSISLPLSNPCPSSQYHNLQTSPSLSISISQPSSFSPQDDMSSVGY
FQTSGPRSNGAPTLESPRIEITAYGQFPEDEVEENSVPVAKRVNSIVTLTLPSIDGYRDP
TCLSPASSVSSRSCHSDASSYESGFSYNYDNSPQNSPWQSPCVSPKGSSSLQSCTLGVSP
RHSPSGSPRASITDDSWIGTRGSRPNSPCGGKRKYSFNGVNSHKYHPYSPNQSPGPSPQT
SPRLSVTEDTWLANTNQYTNSAIVAAINALTTDGLTDIGEGIPLKSRKTSQEHSASMNLK
VEPGGEETGSLELCQDDFSARLPFKKETYCSGFLDVPQHPYWSKPKPYISPSLPALDWQL
PSSSGPYSLQIDVQPKSHHRAHYETEGSRGAVKALAGGHPVVQLHGYMESEPLTLQLFIG
TADDRLLRPHAFYQVHRITGKTVSTPSHEVMQSNTKVLEIPLLPESNMRAIIDCAGILKL
RNSDIELRKGETDIGRKNTRVRMVFRVHINQPNGRMVSLQAASNPIECSQRSAQELPLVD
KQSMESCAASGGEQMLLSGHNFQPDSKVVFVERAQDGHHIWEMEAKVNRESFKSVALLVE
VPSYRNQRISNPVQVNFYVCNGKRKRSQYQRFTYLPTNVPTIKTEPRDDYDLPQVCAPLH
PVGLALHPKPYYSPPAMTPMIPSELRSCVTGSFASSPQRLAAKPTSLSCSSSPSTSPKLQ
DLSPPHISTKCLSVGLNLGSQSPTVPHVSTIQPTPGRYPQSMLYPTGSAASSPGSHPSTP
NSAPELPFTPSLSLTQSQATSEASALAAHITKGPVRSGSSPLLQEEEDAPAMLAVSIKQE
PQELDQMYLDDVNEIIRNDLSSISVHSHA
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcggcagaggaagatgcctatggttacagccaaaacaccagcatttcacttcct
ctgagcaacccctgcccatcttcccagtaccacaatctccagaccagcccttcattgtca
atatccatcagtcaaccatcctcattctcccctcaagatgacatgagctcggtgggctac
ttccaaacatccggcccccggtccaatggagctcccacattggagagtccacgcattgag
ataacggcttacgggcagttccccgaggatgaagtagaggagaacagcgttcccgtggcc
aagcgagtcaattccatagtgacattaacattgccaagtatcgacggttatcgtgatccc
acctgtctcagcccggctagcagcgtgtcttctcgtagctgccattcagatgcatcgtca
tacgaatcgggcttctcgtacaactacgacaactcgccgcagaactcgccctggcagtct
ccatgcgtctccccgaaaggttcctcatcgctgcagtcctgcaccctcggggtgtctccg
cgccattcaccatccggttctccccgtgccagtatcacagacgacagctggattggcacc
agaggctctcgaccaaattctccttgtggcggtaaacggaagtacagctttaatggcgtc
aactcacacaagtaccatccgtactcgccaaatcaatccccggggccatcgccacaaact
tcaccccgtctcagtgtgactgaggacacctggctcgccaacaccaatcagtacaccaac
tctgccattgtcgccgccattaatgccctcaccacagatggattaacagatattggggag
gggatccctttgaagtcccgcaagaccagtcaggagcacagtgcctcgatgaacctgaaa
gtagaaccaggtggagaggagacgggatccctggagctttgccaggatgacttctcagca
cgcctgcccttcaaaaaagagacctactgtagtggcttcttggatgtaccccaacaccca
tactggtccaagccgaagccttacatcagtccatcgttgcctgcactagattggcagttg
ccttccagttcagggccgtatagcctacagattgatgtccaacccaagtcccatcaccgt
gctcattatgagactgaaggcagcagaggggccgtgaaagcactagcgggagggcatcca
gtggttcagcttcacggctacatggagagtgagcctttgaccctacagctgttcattggg
acggcagacgaccgtcttctccggcctcacgccttctaccaggtccaccgtataaccggg
aagaccgtgtccacaccaagccacgaggtcatgcagtccaacaccaaagttcttgagatt
cctctcctgcccgagagcaacatgagggccataatcgactgcgcaggaattctcaagctg
cgtaactcagacatcgagctccggaagggcgagacagacatcggacggaagaacacgcgt
gtgaggatggtgttccgtgtccacatcaaccaacctaatggcaggatggtgtccttacag
gcggcatctaaccccattgagtgctcccagcgctcggcacaggagctgcccctcgtggat
aaacagagcatggaaagctgtgccgcctcagggggggaacagatgcttctcagcgggcac
aacttccagcccgactccaaggtggtgtttgtggagagagcacaagatggccatcacatt
tgggaaatggaggccaaagtcaacagagaatcctttaaatctgtggctttgcttgtggaa
gtcccatcatatcggaaccaaagaatatccaacccagttcaagtgaatttctacgtgtgc
aatggcaaacggaagagaagccagtaccagcgtttcacatacctgcccacaaacgttcca
accataaaaacagagccgcgcgacgactacgacctcccccaggtatgtgcgccgctccat
cctgttgggttggcactgcatccgaagccctactacagccccccggcgatgacccccatg
ataccctcagaactaaggtcctgtgtgacgggctcattcgcgtcgagccctcagagactt
gcggcaaagcccacctccctgtcctgctcgtcctcccccagcaccagcccaaaactgcag
gatctttccccgcctcacatctccactaagtgcctatcagtgggattgaacttgggctcc
cagtctcctacggtcccacacgtctccaccatccagcccacacccggacgctaccctcag
tccatgctctacccgacaggaagcgctgcatcctctccagggtcccatccttccacccca
aactccgcaccagaactccccttcactcccagcctcagtctgacccaatcacaggccacc
agtgaggcctctgcgttagcggctcacataaccaaaggaccagtgaggagcgggtcctcc
cccctcctacaggaggaggaagacgcccccgccatgctggctgtcagcatcaagcaggaa
ccacaggaactggatcaaatgtacctagatgatgtaaatgaaatcatcaggaacgatctc
tccagcatctccgtgcacagccatgcatag
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