Rhinichthys klamathensis goyatoka (western speckled dace): 130085130
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Entry
130085130 CDS
T09701
Symbol
sall3b
Name
(RefSeq) sal-like protein 3b
KO
K19871
sal-like protein
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130085130 (sall3b)
03036 Chromosome and associated proteins [BR:
rkg03036
]
130085130 (sall3b)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
130085130 (sall3b)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
130085130 (sall3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-met
zf-C2H2_15
zf-C2H2_6
zf-Di19
zf-C2H2_11
B129_C2H2-zf
zf-C2HE
zf-H2C2_5
Zf-C2H2_ZNF451
UBZ_FAAP20
Motif
Other DBs
NCBI-GeneID:
130085130
NCBI-ProteinID:
XP_056106678
LinkDB
All DBs
Position
Unknown
AA seq
1248 aa
AA seq
DB search
MSRRKQAKPQHLRSDEEGTQSDKSPDNALRLRGGDEEDSGTESRSGGEETHVCERCCAEF
FKWSEMLEHQQKCTEDPPVLIVKENEEKAICRESPTESLLSAHSDSAEMEASELNTELAE
KVDEMPEETHIIDLDEQMDISLPEHKTSNLSPLQLDNENHTSSPAPPTTNHYDMPSTNVT
LEILHSTRVAVAQFSQSIHCAGSAGKLNSAAIPMILEQLMALQQQQVQQLQLIEQIRSQV
AVMNRQPTQAALNPASKSLPSDSNTYNFQGIAPPPVLPLSGVMPSAVNGHASVSQASMLS
RPPLLSSQPSSGQIGSRALESATTSLTSSSPHLFSYSGASPLLPTCSGSLSNVSNTQSVS
TPSPLSACQSSLLSPSANLPLLPQSPPNGVIFPNPLASIAATASALDPLAAMMKHRKGKL
PGVSIFDNKPSSEDPFFKHKCRFCAKVFGSDSALQIHLRSHTGERPFKCNICGNRFSTKG
NLKVHFQRHKEKYPHVQMNPYPVPEYLDNIPTSSGIPYGMSFPPEKAGPTWLDSKPVLPT
VPSSMGLQLPPTVPIIESLSDSFTSTPSERSPHRPSPARGELAPSSPNPTGTETDMSTIA
ASPKSIREEEITNSFNTEEVHLPSNSMTRNGNNSNSLLSQSMSTETPVKGNVSESTDVPS
AVNKSPSPPLISDQFRAKFPFGGLQDSMQTSETSKLQQLVENIDKKMMDPNQCVICHRVL
SCQSALKMHYRIHTGERPFKCKVCGRAFTTKGNLKTHFGVHRAKPPLRIQHSCPICQKKF
TNAVVLQQHIRMHMGGQIPNTPLAETIYEKDTDMESFDSMSTYDDDCLDDISFEEEADVV
ENSENTLSSFSDSPPPISSLSTSVSESQNVRSDSSISLSQSNGKKMVKYGPMDNDLHALG
LITTGEMENHSMGTRLMPHSSSSIHIPSYLNSQPEGLHEHPVSLNLSSKIPEETAIVKSE
TTDCIAANTVNGVTLNQTGIQPIKSTVKKENPFNVQCFSKEHENAQRFTEQDTKNSPTAV
KLEMSACSRPYMLKEGPFPAFGLQSPTSRSEVMIPGVTTLTGPPPPRRTPKQHNCSACGK
NFSSASALQIHERTHTGEKPFGCSVCGRAFTTKGNLKVHMGTHMWNNTPARRGRRLSVEN
PIALLGGDALKFSEAFQKDLAARAMNVDQNFWSRYAAAITNGLAMRNNEISVIQSGGVPQ
LPAITVPTDKASTGNSPPITAMEKTGLERGTGQHFSMMIEDKKDIGIN
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgaagaaagcaagcgaaacctcagcatctcaggtcggacgaagaaggaacacag
tcggacaaaagtccggataacgcacttcggttgaggggaggcgatgaggaggacagtggc
acagagagccgcagcgggggtgaagagacacacgtgtgtgagaggtgctgtgctgaattc
ttcaagtggtccgaaatgctggagcaccaacagaagtgcacggaagacccccctgtgctg
atagtaaaagagaatgaagagaaggccatttgccgggaatcaccgacagagtcccttttg
agtgcccacagtgactcagcagaaatggaggccagcgagctcaacaccgagctggctgag
aaagtcgacgagatgcctgaggaaacccacatcatcgacctggatgaacaaatggatata
agtttgcccgagcataaaacatcaaacctcagccctctacaacttgacaatgaaaaccac
acctcttctcctgcaccacctacaacgaatcactatgacatgcccagcaccaatgtgacc
ctggagattcttcacagcacccgagttgccgttgctcagttttcccagagcattcactgt
gcagggtctgcaggcaagctgaactcagctgcgatacccatgattctggagcagttgatg
gcgctgcagcagcagcaggttcagcaattgcagctcattgagcagatccgcagccaggtc
gctgtaatgaataggcagcctacgcaagccgcccttaatcctgcctcaaaaagcctgccc
tctgactcgaacacttacaatttccagggcatcgctccaccccctgtacttccattatct
ggggtcatgccctctgcagtgaatgggcatgcctctgtatcccaggcgtctatgctttcg
agaccaccgttgctgtcttcccagccaagcagtggacaaatcggctctagagcattagag
agtgccactacttccttaacaagctccagccctcatctcttcagctacagcggggcttcc
ccgctcttacccacttgtagtggatcgctctctaacgttagtaacacccagtccgtcagc
actcccagtccactatcagcttgccagagtagcctccttagcccttctgccaacctacca
ttactacctcaaagccctcccaacggagtcatatttcccaatccactggccagcattgca
gccactgccagtgcattagacccacttgctgctatgatgaagcaccgtaagggcaaactg
cccggcgtctccatttttgacaacaagcccagttctgaggacccattctttaagcacaag
tgtaggttctgcgctaaagtgtttggaagtgacagcgccttgcagatccatttgcgctca
cacacaggtgagaggcccttcaaatgcaacatttgtggcaaccgtttctcaacaaaggga
aacctcaaagtccacttccaaaggcacaaggagaagtaccctcatgtccagatgaacccg
tacccagtcccggagtatcttgacaatatccctaccagttctgggattccctatgggatg
tcttttcctccagagaaggcaggacctacttggttagacagcaaacctgttcttccaact
gtgccatcctcaatgggtctgcagttgccgcccacagtaccaattattgaaagcttaagt
gattcatttacaagcacaccctctgaaagatctccacataggccatcaccagccagaggt
gaacttgccccatcgtcacccaatcccaccggcactgagacagatatgtctaccattgcg
gcctcccctaaatcaatcagagaagaagagatcacaaacagcttcaatacagaggaagtg
cacctgccatcaaacagtatgactagaaacggtaacaactccaacagcctgctttcacaa
tccatgtcgacagaaacacctgttaaggggaatgtatcagagtccactgatgttccttca
gctgttaataagtcaccctctcctccactcatctcagatcagttcagggccaagttccca
tttggtggtctccaagactctatgcaaacatctgagacatcgaagctccaacagcttgtg
gaaaacattgacaagaagatgatggatcccaatcagtgtgtaatctgccaccgcgtgctt
agctgtcagagcgcgctgaagatgcactaccgcatccatacaggggagagaccatttaaa
tgcaaggtttgtggacgagcattcaccacaaagggtaacttgaagactcactttggtgtc
caccgtgcaaagcctcctcttcggattcaacattcatgcccgatctgtcagaaaaaattc
acaaatgctgttgtgttacagcagcatatacgcatgcacatgggtgggcagattccaaac
actcctttggcagaaaccatctacgagaaagacacagatatggagagtttcgacagcatg
agcacttatgatgacgactgtcttgatgatatttcatttgaagaagaagcggatgttgtg
gagaacagtgaaaacaccctgagctctttttcagacagtccaccacctatctcatctctg
tcaaccagtgtatcagaatctcaaaatgtaaggagtgactcatccatcagtctcagccaa
tcaaatggaaaaaagatggtcaagtacggacctatggataatgatcttcatgctctaggc
ttgatcaccactggtgagatggagaaccatagcatgggaactagattaatgccacattca
tctagttctattcacattccatcctatctcaacagtcaacctgaaggcctacatgagcac
ccagtctctctgaacctctcctctaaaatccctgaggaaacagctatagtaaaatctgaa
acaacagattgtattgcagcaaacactgtcaatggggtgactcttaatcaaacaggaata
cagcctatcaagtctacagtaaagaaagaaaaccctttcaacgtgcaatgtttcagcaag
gaacatgaaaatgctcaaaggtttactgaacaggatacaaaaaattcgccgactgcagtg
aaactggagatgagtgcttgcagtagaccatacatgctaaaagaagggcctttccctgca
tttggcctgcagtctcccacctcacgctctgaggtgatgataccgggcgtcaccacactc
actggaccaccccctccccgacggacccctaagcaacacaactgcagtgcatgtgggaag
aacttctcttctgccagcgccttgcagatccacgagcgcacacacacaggcgaaaaacct
ttcggctgctctgtctgcggtcgagcgttcacaaccaagggtaatctcaaggtgcacatg
ggcacccatatgtggaataacactcctgcccgtagaggtagacgattgtctgtggaaaac
ccaattgcccttctgggcggtgatgccctgaaattcagcgaagcgtttcagaaggattta
gcagcgcgggccatgaatgtggaccaaaacttctggagccgatatgcagcagctataact
aatggcttagcaatgaggaacaatgaaatatccgtcattcagagtggaggagtcccccag
cttcctgccattactgtgcccacggacaaggctagcactggaaacagcccaccaatcaca
gccatggaaaaaacaggcttagaaaggggtactggacaacacttctccatgatgattgag
gacaaaaaagacatcggaatcaattaa
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