KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130085168
Entry
130085168         CDS       T09701                                 
Symbol
polr2c
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03020  RNA polymerase
rkg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    130085168 (polr2c)
  09124 Replication and repair
   03420 Nucleotide excision repair
    130085168 (polr2c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rkg03021]
    130085168 (polr2c)
   03400 DNA repair and recombination proteins [BR:rkg03400]
    130085168 (polr2c)
Transcription machinery [BR:rkg03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     130085168 (polr2c)
DNA repair and recombination proteins [BR:rkg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      130085168 (polr2c)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L
Other DBs
NCBI-GeneID: 130085168
NCBI-ProteinID: XP_056106745
LinkDB
Position
Unknown
AA seq 275 aa
MPYANQPTVKITELTDENVKFVIENTDLAVANSIRRVFMSEVPTIAIDWVQIDANSSVLH
DEFIAHRVGLIPLTSDDIVDKMQYSRDCTCDDFCPECSVELTLDVRCTEDQTRHVTSRDL
LSNNPRVIPVTSRSRDNDPNDYVEQDDILLVKLRKGQELRLRAYAKKGFGKEHAKWNPTA
GVAFEYDPDNALRHTVYPLPQEWPKSEYSEIEEDGVQAPYDPNGKPERFYYNVESCGSLR
PETIVMSAFAVLKKKLSDLQTQLSHEIQSDVLTIN
NT seq 828 nt   +upstreamnt  +downstreamnt
atgccgtatgccaaccagcccacagtgaagatcacggagctgacggacgagaatgtgaag
tttgtgatcgagaacacggatctcgcggtggcgaactctattcgtcgcgtgttcatgtca
gaagttccaaccatcgctatcgattgggttcagatcgatgccaactcctctgtactccat
gatgagtttattgcacacagagtggggttaattcccctcacaagtgatgacattgttgac
aagatgcagtactcacgagactgcacatgtgatgatttctgtccagagtgttcggttgag
ctcacgcttgacgtaagatgtacagaagatcagacgcgacacgtgacctcacgagatctc
ctgtccaataacccccgggtcatccctgtaacatccagaagtcgagacaacgatcccaat
gactacgtagagcaggatgacatcttgttggtgaagctgcggaagggtcaggagctgcgt
ctcagagcgtacgctaaaaaggggtttggcaaggaacacgccaagtggaatcccaccgca
ggggtggcgtttgagtatgacccagacaatgcgctgagacacacggtgtacccacttcca
caggaatggcctaaaagtgaatattcagaaattgaagaggatggagttcaagctccatat
gatcctaatggcaagccagaaaggttctattacaacgtggagtcctgcggttcacttcgg
ccagagaccatcgtcatgtcggcttttgctgtccttaagaagaaactgagtgatctgcag
actcagctcagccacgaaattcaaagcgatgtgctcaccattaactaa

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