Rhinichthys klamathensis goyatoka (western speckled dace): 130085191
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Entry
130085191 CDS
T09701
Symbol
det1
Name
(RefSeq) DET1 homolog
KO
K10571
de-etiolated-1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130085191 (det1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130085191 (det1)
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
130085191 (det1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Det1
Motif
Other DBs
NCBI-GeneID:
130085191
NCBI-ProteinID:
XP_056106784
LinkDB
All DBs
Position
Unknown
AA seq
559 aa
AA seq
DB search
MAAHRNTTLEDGFPTLKPRRIQNQNVVYRLERRRICSGPLGAHWYRVRCFHQNLFPNFTV
VNVEKPPCFLRKFSPDGRCFIAFSSDQTSLEIYEYQGCQAAEDLLQGQEGETLANGNDQR
SLNIRGRLFERFFSLLHVTNVASNGEHLNRECSLFTDDCRYVIVGSAAYLPEEPHPHFFE
VYRNNESVTPNPRSPLEDYSLHIIDLHTGRLCDTRTFKCDKIILSHNQGLYLYRNILAVL
SVQQQTIHVFQVTPEGTFLDVRTIGRFCYEDDLLTLSAVYSEAQAEGQPGFSRLYKEKTI
NSLKHRLLVYLWRRAEQDGSATAKRRFFQFFDQLRQLRMWKMQLLDEHHLFIKYTSEDVV
TLRVTDPSQPSFFVVYNMLTTEVIAVFENTSDKLLELFENFCDLFRNATLHSEAVQFPCS
ASSNNFARQVQRRFKDTIVNAKYGGHTEAVRRLLGQLPISAQSYSSSPYLDLSLFSYDDK
WVSVMERPKTCGDHPIRFYARDSGLLKFKIQAGLLGRPINHAVRRLVAFTFHPFEPFAIS
VQRTNAEYVVNFHMRHGCV
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcaccgcaacactacattggaggatggtttccccactctgaagccgagacgc
atccagaaccagaatgtggtctacaggctagagaggcgtcggatctgctccggtccactc
ggggctcattggtaccgtgtgcgctgtttccaccagaacctgttccccaacttcacagtg
gtgaacgtagagaagccaccctgcttcctgcgcaagttctcccctgacggacgatgcttt
attgcattctcctctgatcaaacttccttggaaatctacgagtaccagggatgccaagcc
gctgaagatcttctccagggtcaggagggagaaacgttggccaatgggaacgaccagcgc
tccctcaacatcagaggcagactcttcgaacgcttcttctccctgctccacgtcaccaac
gtggcctccaacggtgagcacttgaatagagagtgcagtcttttcactgacgactgccgc
tatgtgatcgtcggctctgctgcctacttgccagaagaacctcatccgcactttttcgag
gtgtacagaaacaacgaatctgtgacaccaaacccacgctcacctcttgaagactactct
ctgcacatcatagacctgcacacgggccgactgtgtgatacacgcacctttaagtgtgac
aaaatcatcctgtcacacaatcaaggactgtacctgtacagaaatatattggctgtgctt
tctgtgcagcaacagaccattcatgttttccaggtgacaccagaaggaaccttccttgac
gtgcgcaccatcggccgtttttgttacgaggatgacctgctgacgctgtctgcggtttac
tccgaggcccaggctgaaggccagcccggtttctcccgcctttataaggagaaaaccata
aactctttgaagcaccgtctcctggtgtacctgtggaggagggcagagcaggacggcagt
gccacggccaagcggcggttctttcaattcttcgatcagctcaggcagctgcgcatgtgg
aagatgcagctcctggacgaacatcacctgttcatcaagtacaccagcgaagatgtagtc
acactgagggtcaccgacccctcgcagccctctttcttcgtggtttacaatatgctaacc
accgaggttattgcagttttcgagaacacttctgacaaacttctggagctttttgaaaac
ttctgcgacctcttccgtaacgccacactccacagcgaggctgtgcagttcccctgctct
gcttccagcaacaactttgcccggcaggtacaacgcaggttcaaagacaccatcgtgaat
gccaaatacggagggcacacagaagcggtcagaaggcttctcggtcagctgcccatcagt
gctcagtcctacagcagtagcccgtatctggatctttccctcttcagctacgatgacaag
tgggtgtctgtcatggagcggccaaagacctgtggcgatcatcccatacggttctatgcg
agggactctggattgctgaaatttaagatccaggcaggcctgctgggcagacccattaac
cacgctgtcaggagactggtcgcgttcaccttccatcccttcgagccctttgccatctct
gtgcagcgcaccaacgccgaatacgttgtcaactttcacatgcgccacggatgcgtatga
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