Rhinichthys klamathensis goyatoka (western speckled dace): 130085244
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Entry
130085244 CDS
T09701
Symbol
ppfibp2b
Name
(RefSeq) liprin-beta-2b isoform X1
KO
K27096
liprin-beta
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130085244 (ppfibp2b)
Membrane trafficking [BR:
rkg04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
130085244 (ppfibp2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
SAM_2
FxsA
Spc42p
WHEP-TRS
Motif
Other DBs
NCBI-GeneID:
130085244
NCBI-ProteinID:
XP_056106876
LinkDB
All DBs
Position
Unknown
AA seq
1079 aa
AA seq
DB search
MASDASHMLEAALEQMDDIIAGSKAAVEFSNGLYDLGSPVSVGPLQVLQLAEELRLTLEL
QVGDEDRKSLRSQLPCTTAQSLMEWLEKGSVNLQSSSNNETYQERLARLEGDKESLVLQV
SVLTDQVEAQGEKIRDLESSLEEHHHKLISTEEMLQQELFSRTSLETQKLELVDEVSYLK
LKLVGMEEEHNHIDEENKHHKAESVVNLISELQEQMCKFQEEISNRIQEQRALESMGDSS
TREALDQSPDVGLGASDAEECSCRCRSGGENALLQELRLFKNKVEELEGEKSQYERKLKA
TKLSITYSLHVCYQSLMTKLSTLKLTVEHTQVERQHWEERCRTAQTEIAKLQQLLSTKDA
EIECLQSQLLSRGTINNDITEREEVYKKKLRDKHQELQRLKTGMETLIAANNEKDRHIDE
LNVLLGQYRKLKDGLALSQVTNDTLLSGSSEEDLSGNRKIRALTHRVYSDIIRSELQMSS
RGPSPLLVSPPCLQRELDSSCHSIQPSMETSMVSIGDLGFYSRQWSMQRMLSTSLEELQS
GSLQMHVVGQPVEAVLENRYNPENNKYQTLPGKFSRPEQNGVRLLASSPLQLSPDESEDS
EFNLRPRGKHDHFVVGKTEKTDDSTLSDLSPMSSGVESGQQSPVSPEHKKNQKGIRKLWG
KIRRTQSGSLPADGSDSDFKRGGFRATAGPRLACLGIGSSARDMNAPFSKWSCDQVCAWM
EDSGMGQYVNMARQWVTSGQTLLSASSQDVEKDLGIKHPLHRKKLQLALRSFSTKITEKS
SELDHIWVTRWLDDIGLPQYKDQFHDGRVDGRMLQYLTVNDLLFMKVTSQLHHLSIKCAI
HVLHVNKFNPNCLKRRPGDENKTSPSEVVQWSNHRVMEWLRSVDLAEYAPNLRGSGVHGG
LIILEPRFNSDTLALLLNIPPQKTLLRRHLATNFNTLVGSQAQQEKQEFLESSSYTPLTT
TAKVRARKIGFSSFGHRKKRADDSTDYICPLDASQAQALLNGANRPYSGFRGLSPIFDRD
PERREQILCAKGSGMQIEALSRGINNLTDTRQEKKDPTAGSLSPNTKERIILCIRETTL
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagatgcaagtcacatgttagaagcagccttggaacaaatggatgatattatt
gctggttccaaggctgcggtggagttcagtaacgggctctatgacctgggctctcctgtg
agtgtcgggcccctgcaggttctccagctggctgaggagctgagactgacactggagctg
caggtcggggacgaggaccgcaagtcactgcgctcccagctgccctgcaccaccgcacag
agcctcatggagtggctggagaaaggatcggttaacctccagtcctcgagcaacaatgag
acctatcaagaacggctggcgagattagaaggggacaaagagtctctggttctccaggtg
agtgtcctcactgaccaggttgaagctcaaggagaaaagatcagagatctggaaagttcc
ctggaagaacaccaccacaaactcatttccactgaggaaatgctccagcaggagctcttc
agccgaacctcactggagacgcagaaactggaactggtggatgaagtttcctatctgaaa
ctcaagcttgtcggcatggaggaggaacacaaccacatagatgaagagaacaaacatcat
aaagcagagagtgtggttaatctaattagtgaactacaggagcagatgtgtaaattccag
gaggaaatcagcaatcgcattcaggagcagagggccctggagagcatgggggacagtagc
acacgcgaggctctcgaccagagccccgatgtgggccttggtgcctcggacgctgaggaa
tgcagctgccgctgtagaagcggaggagagaatgcattgctacaagagcttcgccttttt
aagaacaaagttgaagaactggagggagagaaatcgcaatatgagaggaagctcaaagcc
acaaagctttctatcacctattccctccatgtctgttaccagtcgctcatgaccaaactt
tctaccctgaagctcacggtcgagcacactcaggtagaacgacagcattgggaggagcgc
tgtcggacagctcagactgagattgccaaactccagcagctgctttctacgaaagatgca
gaaatcgagtgtctacagagtcagcttctgtcccgaggaaccatcaacaatgacatcaca
gagagagaggaagtgtataagaaaaagctgagagacaaacatcaagagttacagcggtta
aaaactggaatggagacgctgatagctgccaataatgaaaaggatcgccacatagacgaa
ctcaatgttcttttgggccagtacagaaaattgaaggatggcttggccctttctcaagtg
accaacgatacgttgctgtctggcagcagtgaagaggatctttctggcaaccgaaaaata
agagccctgacccatagagtgtactcggacatcatcagatcagaactgcagatgtcttcc
cgaggcccgtcgccactcctggtctctcctccatgtcttcagagggaactggactccagc
tgtcacagtatacagccctccatggagacctcgatggtatccattggcgatttgggcttt
tacagcagacaatggtcaatgcagcgaatgctgtccaccagcttggaagagctccaaagt
ggaagcttacagatgcatgtagtgggccaaccagtagaggctgttttagagaaccgatat
aatccagaaaataacaaataccagacgctcccgggcaagtttagtcgtccagagcagaat
ggagtgagacttctggcgtcttccccactacagctgtctcctgatgaaagtgaagacagt
gaattcaacctaaggccgcggggaaagcatgatcactttgtggttggaaagaccgagaag
acagatgactcaaccttgtctgacctttcgccaatgtcatctggagtagaatcaggtcaa
cagtcccctgtttcaccagagcacaagaagaaccagaaaggcatccgaaaactgtgggga
aagatcaggagaacccagtctggcagtcttccagctgacggttcggattcggattttaag
agagggggtttcagagccacggctggcccacgactcgcctgcctgggcatcggttcttca
gcacgtgacatgaacgcccccttctcgaaatggtcatgtgatcaggtgtgtgcatggatg
gaggactccggcatgggtcagtacgtgaatatggccagacagtgggtgactagcggtcag
actctactctctgcctcttcgcaggatgtagagaaggatctgggaattaaacatccacta
cacaggaagaagctccagctggctctgcgctccttcagcaccaaaatcacagagaaatcc
tctgaactcgaccacatctgggtcacacgatggctggatgatatcggattaccgcagtat
aaagaccagtttcatgacggacgtgtggacggtagaatgctgcagtacttgacagtgaat
gatctgctgttcatgaaagtcaccagtcaacttcatcatctcagcatcaagtgtgctatc
cacgtcctacatgtaaacaagttcaaccccaactgcctcaaaagaagacctggagatgag
aataagacatccccttctgaggtcgtccagtggtccaatcaccgtgtgatggagtggctc
agatcagttgacctggcagaatacgcccccaacctgagaggcagcggagtgcatggagga
cttataatcttggaacctcgttttaactccgacacccttgcgctgctcctgaacatcccc
ccgcagaagactctgttgaggaggcacctggccactaatttcaacacgctggtgggctct
caggctcagcaagagaaacaagagttcctggaatcatcaagctacacgccactaaccacc
accgcaaaagtccgggcacgtaaaataggcttctccagttttggccaccgcaagaagcgc
gctgacgactccacagactacatctgccctctggatgcatcccaagcccaggccctgctc
aacggggccaaccggccctacagcggcttcaggggcctgagccccatcttcgacagggac
ccagagaggcgggagcagattctgtgcgctaaaggatcagggatgcagatcgaggcctta
tccaggggaattaacaacctcacagacaccagacaagagaagaaagatccgactgcaggt
tcactctcacccaatactaaggaaagaataatattgtgtataagggaaacaacactttga
DBGET
integrated database retrieval system
