Rhinichthys klamathensis goyatoka (western speckled dace): 130085591
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Entry
130085591 CDS
T09701
Symbol
prdm2b
Name
(RefSeq) PR domain zinc finger protein 2 isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg00310
Lysine degradation
rkg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
130085591 (prdm2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130085591 (prdm2b)
03036 Chromosome and associated proteins [BR:
rkg03036
]
130085591 (prdm2b)
Enzymes [BR:
rkg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
130085591 (prdm2b)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
130085591 (prdm2b)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
130085591 (prdm2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
zf-C2H2_jaz
zf-C2HE
zf-C2HC_2
zf-C2H2_ZNF462_1st
zf-C2H2_11
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
130085591
NCBI-ProteinID:
XP_056107403
LinkDB
All DBs
Position
Unknown
AA seq
1737 aa
AA seq
DB search
MALPQGAYETLDDIPAHVWKGLPNSMKLGPSAVNPNRIGVWASRLIPKGKRFGPFVGERK
KRSQVTSNVYMWEVYFPAWGWMCVDATDPMKGNWLRYVNWARSSQEQNLFPLEINRAIYY
KVLRPIGPDEELLVWYNGEDNPEIAAALEEERTSNLSKKSSPRAKRARRKLSEKARQADL
GGFCEPNKSSAAEPLFTVMRDSEEGLNDEERPSSPPELEQIAVSQSTSIESENPVLFHTT
EMNQREGLDEEHVKVDGQLLNQCPQHPSEAESVDGNEKSLQQIHSGKPAEESSESPLCDT
GFISSLANPELEADGDFEDDPQGGTYPCQHCERHFSTKQGLERHTHIHTTSNLQTHTFKC
RYCAKPFGSQVGRRRHERRHENGSKTLNRPGSLSGTAFLHSPTMPNDSATSGSASTPSHA
VVMNTQNGPPQLTSDYLKKEPGVESDRPFILDENGESKELHPCKYCNKAFGTHTNMRRHQ
RRIHERHLMPKGVRRKGILLQDGSSQHQHHEQGQPVLLQEESPSASPPPIYVPSVETEDE
GEREECMVDISNNISENLSHYIDGKIPSTSTVSNCEVIEVDSSTAALFGLDALILSPKQI
SHALKVETRTCPVKEVSCMSQTTSKRRTATPPLLPAVKVEAETVSSSSSLSSPSSQSSLL
VGNIFSQSTETLAFQKEKTVYLSPKLKQLLQAPDGQKTAIGLITDNRLTTPLSVTSLPTV
QGRFKRRTASPPTASQSSPPQRNDNISSAAGVSCSLKVPKIETHCMTHSWSLSSSDHGDT
ESLTGKDWSPSRSGGNSCNQQPLDLSNSFSKRDNSVSRGSGEAVLDLSMNRKSPVDHEVK
TCSATLPPHVKRKKPNTSILEKVLMNEYAGLNSPGEEGSNTLGSPDALSSSESATCVAPS
SPGSGSEPLPCESTSPPSLTPMTINPSSPSSSSIASSTPPPPVLPTIPSPPPLSSQHFHM
SDTLSPSPFPVLSPKMSPKAVDSLEEVSDSSALTESCHDALNSINESDQTAEQLDRAISP
LPQDAKRHCTADSSSKSETLLEGSTHDSKPQFLRNADQAGSSHLEWDTASETSQSHSSEG
TLPQDLNIKTEDRHKSEPSLSTVQSTTKESSPNFLSELHSQQKSSEVDNNLAEEDKGKKE
EPVDITNGGDTSPGTPVKNCDIETPERENFVKSFVCNVCKEPFRSIKDLSGHIMEHASEW
PFKCEFCVQLFGNATALLEHRSSLHGVGRIYVCSICSKEFAFLCNLQQHQSDLHPSQSCT
HTAVENGKLRPQNYTDPAYTNVEKDSFDAEDSSEERNSDTNKVEEEENGHEDPTEELYTT
IKIMASEAGKPKGPDVRLGINQHYPSFKPPPFPYHNRTPDGSVASATNFTTHNIPQTFST
AIRCTKCGNSFDNMPELHKHILVCANASDKRRYTPKKNPIPLKQVVKQSPNGLSTTGAST
GQNAFRRMGQPKRLNFNQDITSKAKLSALNKKKNQLVQKAISQKNKSAASAKKPPTRVKE
EETHEVHACPYCNREFTYPASLAKHIACSCPQRPVAKKLNKGALMPQDKNRSLRSRAIES
EVKQEAGSGSSAKPLGKTRARSSEPIENEALPAIKGKEPQVRTKRPALNMDNTAPQTKKG
KKNNEPLTSIAPAVTDDSSTRPPSKMQRGSKEVVAKKEVVVKKQVVVKKEVVKEVVVKTH
QSKKEERFSARTRERKGGPVTRSVQIASASAPLELKTEDLSNHEPGQSEEPLLKLAR
NT seq
5214 nt
NT seq
+upstream
nt +downstream
nt
atggctttgcctcaaggagcatatgaaaccttggatgacatcccagcccatgtgtggaaa
gggctgccaaacagcatgaagctgggaccgtcagctgttaacccaaatcgcattggtgta
tgggcatctagattaatacctaaaggcaaaaggtttggaccatttgtaggagaacgaaag
aagagatctcaagtgacaagcaatgtttacatgtgggaggtatattttccagcttggggg
tggatgtgtgtagatgccacagatccaatgaaaggaaactggttgcggtatgtgaactgg
gcgcgctcttctcaagagcaaaacctctttccactggaaatcaaccgagctatttactac
aaagtgttaaggccaatcggacccgacgaagaacttctagtgtggtacaatggggaagac
aatcctgagatagcagctgcattagaggaagaaaggactagcaacctgagcaagaagagt
tcacctagagcaaagcgagcaaggaggaagctgtcggaaaaagccagacaggctgatttg
ggtggattctgtgaaccgaataaatcgagtgccgctgaacccttattcacagtgatgcgg
gactcagaggaagggcttaatgatgaggaaagaccatcttcacctccagagttggaacag
attgcagtttcccagtcaacttctatagagagtgaaaaccctgtcctgtttcacacaaca
gagatgaaccagagggaaggattggatgaggaacatgtaaaggttgatgggcaactgtta
aatcagtgcccacagcacccctctgaggcagaatcggttgatgggaatgaaaagtctctc
cagcaaatacattcgggcaaacctgcagaagaaagctctgagagtccactgtgtgataca
gggtttatatcttctttagcgaatcctgagttggaggcagatggggattttgaggatgac
ccccagggaggaacatacccctgtcagcactgtgagcgacatttctccaccaaacagggc
ctggagcgccacactcatattcacactacttcaaaccttcaaactcatacgtttaagtgc
cggtactgtgccaagccctttggctctcaggtaggcaggcgcagacatgaacgtagacat
gagaatgggagtaaaactttaaataggcctgggtcactcagcggaacagcgttcctccac
agtcctacaatgcccaatgattctgctacttctggcagtgcgtccactccaagccatgca
gtcgttatgaacacacagaacggtcctcctcagctaacctctgactatttgaaaaaagag
cctggtgttgaatctgaccggccttttattttagatgagaatggggagtcaaaagagctt
catccttgcaagtactgtaacaaggcttttggcacacacaccaacatgcgcaggcaccag
cgtagaatccatgagcggcatctaatgcctaaaggtgttcgccggaaaggtatactcctg
caggacggctcctcccaacaccagcaccatgaacaagggcagcccgttttgctccaggaa
gagtcaccaagtgccagtccaccacctatttatgtgcccagtgtggagaccgaggatgag
ggagagagggaggagtgtatggttgatatctctaacaacatttctgaaaatctcagccat
tacattgatggaaagataccatctacaagcacagtgagcaattgtgaggtcatcgaggtt
gattcaagcactgcagcgttgtttggccttgatgctcttattttgagtcccaaacaaata
agtcatgctcttaaagttgaaacacggacttgtccagtgaaggaagtttcatgcatgtct
cagacaacttctaaaaggcgaactgctacaccaccgctgctgcctgctgtgaaagtggag
gctgaaacggtgtcctcctcttcctcattgtcctccccttcctctcagtcctctttgttg
gtaggaaacattttctcccagtcaaccgaaacgttagcttttcaaaaggagaaaacggtt
tatctctctccaaaacttaaacaactactacaggccccggacggtcagaaaacagccata
ggtctaattaccgataatagattgaccaccccactttccgtaacttcactgcctactgtc
caaggtaggtttaaaagaagaaccgcctcccctcccacagcttcacagagtagcccacca
caaagaaatgacaacataagctctgcagctggggtttcatgttctctgaaggtgccaaag
attgagacccactgcatgactcattcttggagtttgtccagcagtgatcatggggacact
gaaagcctgacaggaaaagactggtctccttcaagaagtggagggaattcttgcaatcag
cagccgcttgacctttcaaattccttcagtaaaagagacaatagtgtaagcagaggatct
ggagaggctgtgcttgacttaagtatgaaccgtaaaagtcctgttgaccatgaagtaaag
acatgctcagccacactaccacctcatgtgaagaggaaaaaacctaataccagcatttta
gaaaaagtgttaatgaacgagtatgctggcttaaactcacctggagaagaaggatccaac
actcttggaagtcctgatgccctttcgtcttctgagagtgccacatgtgtagccccttct
agtcctggatcaggatcagagccccttccttgtgaatcaacctctcctccctccctgacc
cctatgactattaatccatcctctccatcttcctctagtatagcttcatctactccccct
cctccagtcttacccactatcccatctcctccgcctctatcatcgcagcattttcacatg
tcagacaccttatcaccttccccttttccggtgttgtcccctaaaatgtccccaaaagca
gttgatagtttagaggaagtgtctgattcatctgcattaacagaatcatgccatgatgca
ttaaattccattaatgaatcagaccaaactgctgagcagttagaccgtgcgatttctcca
ctgcctcaggatgcaaaaagacattgtacagcagattcatcttcaaagtcagaaacacta
cttgagggctcaacccatgattctaagcctcagtttttaagaaatgcagaccaagcaggt
tcttctcacctagagtgggatactgcttctgaaaccagccaaagccattcctctgaagga
actctcccccaagacctcaatattaaaacagaagatcgacacaaatcagagccttctctt
tctacagtacaatcaactactaaggaatcttcaccaaacttcctcagtgaattgcattct
caacagaagagttcagaggtcgataacaacttggctgaagaggataaagggaaaaaagag
gagccggttgatataacaaatggaggtgacacttcacctgggactccagtcaaaaattgt
gatattgaaacaccagagcgagagaattttgtcaagagttttgtatgtaacgtctgcaaa
gagccatttcgctccatcaaagaccttagtggccatataatggagcatgcgtcagagtgg
ccttttaagtgcgagttttgcgttcagttatttggcaatgccactgcgctcctcgagcac
cgctcctctctccacggggtgggaagaatttatgtttgctccatttgctcaaaagagttt
gccttcctctgcaatctccagcaacatcaaagtgacctacatccaagtcagagttgcact
cacactgccgttgaaaacgggaagctcagacctcagaactacacggatcctgcttacaca
aatgtggagaaagattcttttgatgctgaggattcttctgaggagcgtaacagtgacact
aataaggtggaagaagaggaaaatggccatgaggaccctacagaagaactatacactaca
ataaagattatggcatctgaggctggtaaaccgaaaggtccagatgtgcggcttggcatt
aatcaacactaccccagctttaagcctccacctttcccgtaccacaacagaacgcctgat
ggctctgttgcctccgccactaattttaccacacacaacatcccccaaacatttagcact
gcgatccggtgtaccaaatgcggaaacagctttgacaacatgccagagctacataaacac
atattagtttgtgctaatgctagtgataagagacgctacacccctaagaagaatcccatt
cctctcaaacaagttgtgaaacagtctccaaatggtctttccaccacaggagcttctact
gggcagaatgcctttcgcagaatgggtcaaccaaaaaggctcaactttaaccaagatata
acctctaaagcaaagttatcagccctcaataaaaagaaaaaccagcttgttcagaaagcc
atatctcagaagaacaagtctgctgcctctgcaaagaaaccgccaacccgggtaaaagaa
gaggagactcatgaggtccatgcatgcccatactgtaatcgagagttcacatacccagcc
agcctcgctaaacacatcgcttgcagttgtccacaaagacctgttgccaagaaattgaac
aaaggtgcactgatgcctcaagacaaaaacaggagtctccgaagtcgagccattgagtct
gaagtcaaacaagaggcaggttctggatcaagcgcaaagcctttgggaaaaaccagagcc
cggagctctgagccaattgagaatgaagctctaccagcaattaaaggaaaagaacctcag
gtacgtacaaagaggccagccttgaatatggacaacactgccccacaaactaagaaaggc
aaaaagaacaatgagccactgacttccattgctcctgcagttactgatgactcttcaaca
cgtccaccttctaagatgcaacgtggatctaaagaggttgttgccaagaaggaggttgtt
gtcaagaagcaagttgttgtcaagaaggaggttgttaaggaggttgttgtgaaaacgcac
cagtctaaaaaggaggagcgtttttcagcaaggacacgggagagaaaaggtggtccggtg
acacgcagcgtacagattgctagtgcttcagctcctttggaattgaagactgaagacctc
tcaaaccatgaaccagggcagtctgaggagcctctattgaagttagccaggtag
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integrated database retrieval system
