Rhinichthys klamathensis goyatoka (western speckled dace): 130085614
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Entry
130085614 CDS
T09701
Symbol
tfe3b
Name
(RefSeq) transcription factor E3b isoform X1
KO
K09105
transcription factor E3
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04137
Mitophagy - animal
rkg04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
130085614 (tfe3b)
04137 Mitophagy - animal
130085614 (tfe3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130085614 (tfe3b)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
130085614 (tfe3b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
HLH
DUF3371
bHLH_IRO3
Motif
Other DBs
NCBI-GeneID:
130085614
NCBI-ProteinID:
XP_056107449
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MSSRVLLRQQLMREQAQEQERREAQQQASVAQLRSTDSTPAISVTVPPMAARPPPAQVPV
EVLKVQTHLENPTKYHIQQAQRQQVKQYLSTTLGNKVATQTLGVSPVPQSNSAPEMGPSA
SSAPNSPMAHLNLGSNKEEMDDVIDDIISLESSFNDDIMSLIDSGLQLPNTLPGNLLDVY
SSPGMATSNINVSNSCPADLPNIKREFSGNVLLNSLLHNQCSIGFNCLLCYESTVFCSSH
NSCLLSDTDARAFMKERQKKDNHNLIERRRRFNINDRIKELGGMIPKSSDPEMRWNKGTI
LKASVDYIRKLQKEQQRAKEIEMRQKKMEQSNQALLLRIQELEMQARHHGLNTAVSQGLS
TDASFLQQQLLQANQSMQPGVGEGQPQSHLSMDAAMAQTSPFLAIPPSGSPAAAAVSGPL
DLDTFSFADLDDPTASDLYSDVALSDILMDDSCTMPTVRSSDVLFSPGASKTSSHDSSVN
MEDDL
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcccgagtgttgctacggcaacagctgatgcgggagcaggcgcaggagcaggaa
aggagggaggcgcagcagcaggcgtctgtcgctcagctccgctcaacagattccactccc
gccatctccgtcacggtgccacccatggctgcccgccctcctccagctcaagtaccggtg
gaggttctgaaggtgcaaactcatcttgagaacccaactaaataccacatccagcaggct
cagaggcagcaagtgaagcagtacttgtccaccacgctaggcaataaagttgccacacaa
actcttggtgtatcacctgtcccgcagtcaaactctgctccagagatgggcccttctgca
agcagtgctccgaatagcccaatggcacatcttaacctgggctccaacaaagaagagatg
gatgatgtaattgacgacatcatcagccttgagtccagcttcaatgatgacatcatgtca
ctgatagattctggcctacaactcccgaacacgctaccaggtaaccttctggatgtctac
agcagtcctggcatggcaacctccaacatcaacgtcagcaattcctgtccagcagatctg
cccaacatcaaaagggaattttctggtaatgttttactcaacagccttcttcacaaccag
tgttccattggtttcaactgtttgttgtgttatgaatctacagtattttgtagtagtcat
aatagctgtttattgtcagacacagatgccagagctttcatgaaggagaggcagaaaaaa
gataatcacaatctcattgaaaggcggagaagattcaacataaatgacagaataaaggaa
ttagggggtatgatacccaaatccagtgatccggagatgcgttggaacaagggaaccatt
ttaaaggcttctgttgattatataagaaaacttcagaaagagcaacagagggccaaagag
attgagatgaggcaaaagaaaatggaacaatccaatcaggccctgctgctccgcatacag
gaattagagatgcaagctcgtcaccatggcctcaacacagctgtgtctcaaggcctgagc
acagatgcttccttccttcagcaacagctactacaggcgaaccagtccatgcagcctggc
gttggggaaggccaacctcagagccacctcagcatggatgctgccatggcacagacttcc
cccttcctcgctatacctccctccggctccccggctgctgcggcagtaagcggccctctc
gatctggatacctttagctttgcagatctggacgaccctacggcctctgatctttactct
gacgtggctctcagtgacattctgatggatgacagctgcacgatgcccactgtcaggtct
tcagatgtgcttttttcccctggagcctccaagaccagcagccacgatagtagtgtaaac
atggaggatgacttgtga
DBGET
integrated database retrieval system
