Rhinichthys klamathensis goyatoka (western speckled dace): 130085619
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Entry
130085619 CDS
T09701
Name
(RefSeq) red-sensitive opsin-1
KO
K04251
long/medium wavelength-sensitive opsin
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
rkg04030
]
130085619
G protein-coupled receptors [BR:
rkg04030
]
Rhodopsin family
Vision
Opsin
130085619
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
Cytochrom_B_N_2
7TM_GPCR_Srt
RSN1_TM
DUF1418
DUF898
Motif
Other DBs
NCBI-GeneID:
130085619
NCBI-ProteinID:
XP_056107462
LinkDB
All DBs
Position
Unknown
AA seq
357 aa
AA seq
DB search
MAEQLGDVMFAARRRGDETTRETMFTYTNSNNTKDPFEGPNYHIAPRWVYNLSTCWMIFV
VIASTFTNGLVLVSTAKFKKLRHPLNWILVNLAIADLAETLLASTISVINQVFGYFILGH
PMCVFEGYTVSVCGIAGLWSLTVISWERWVVVCKPFGNVKFDGKWASGGIIFCWVWAAVW
CAPPIFGWSRYWPHGLKTSCGPDVFSGSEDPGVQSYMIVLMVTCCILPLAVIILCYIAVY
LAIHAVAQQQKDSESTQKAEKEVSRMVVVMIMAYCVCWGPYTFFACFAAANPGYSFHPLA
AALPAYFAKSATIYNPVIYVFMNRQFRVCIMQLFGKKVDDGSEVSTSKTEVSSVAPA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcaattgggagacgtgatgttcgcagccaggcgaaggggagatgaaacaaca
agagaaacaatgttcacatataccaacagcaataacaccaaagatccctttgagggaccc
aactaccacattgccccccgatgggtgtacaacctctcaacatgctggatgatattcgtg
gtcattgcttcgaccttcaccaatggcctggtgctggtgtccacggccaaattcaagaag
ctccgtcaccctctcaactggattttggtcaacctcgctatagctgatctagcagagact
ctgttggccagcaccatcagtgtgatcaaccaggttttcggctactttatcctcggacat
cccatgtgtgtctttgagggctacactgtgtctgtatgtggtatcgctggtctgtggtct
ttgactgtcatctcttgggagagatgggtggtcgtctgcaaaccatttggaaatgtcaag
tttgatggtaaatgggcatctggtggcatcatcttctgctgggtttgggctgctgtctgg
tgtgcacctcctatatttggctggagcagatattggcctcacggtctgaagacctcctgc
ggccctgatgtcttcagtggaagcgaggaccccggtgtccagtcctacatgattgtccta
atggtcacctgttgtatcctccctctggccgtcatcattctctgctacatcgctgtgtac
ttggccattcatgctgtcgcccagcaacagaaggattctgagtccacacagaaagctgag
aaggaagtgtccagaatggtggttgtcatgatcatggcctactgtgtttgctggggtcct
tatacgttcttcgcctgctttgcagctgcaaacccaggctattccttccatccactggca
gcagccctgcctgcctactttgctaagagcgccaccatctacaaccccgtcatttatgtc
ttcatgaaccgacaattccgcgtatgcatcatgcagctctttggaaagaaggtggatgat
gggtctgaggtgtctacatccaagacagaagtgtcctctgtggctcctgcataa
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