KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130085623
Entry
130085623         CDS       T09701                                 
Symbol
si:dkey-13a21.4
Name
(RefSeq) ras-related protein Rab-7a isoform X1
  KO
K07897  Ras-related protein Rab-7A
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04137  Mitophagy - animal
rkg04140  Autophagy - animal
rkg04144  Endocytosis
rkg04145  Phagosome
rkg04148  Efferocytosis
rkg05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    130085623 (si:dkey-13a21.4)
   04145 Phagosome
    130085623 (si:dkey-13a21.4)
   04140 Autophagy - animal
    130085623 (si:dkey-13a21.4)
   04137 Mitophagy - animal
    130085623 (si:dkey-13a21.4)
   04148 Efferocytosis
    130085623 (si:dkey-13a21.4)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    130085623 (si:dkey-13a21.4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rkg04131]
    130085623 (si:dkey-13a21.4)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rkg04147]
    130085623 (si:dkey-13a21.4)
   04031 GTP-binding proteins [BR:rkg04031]
    130085623 (si:dkey-13a21.4)
Membrane trafficking [BR:rkg04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    130085623 (si:dkey-13a21.4)
Exosome [BR:rkg04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   130085623 (si:dkey-13a21.4)
  Exosomal proteins of other body fluids (saliva and urine)
   130085623 (si:dkey-13a21.4)
  Exosomal proteins of colorectal cancer cells
   130085623 (si:dkey-13a21.4)
  Exosomal proteins of bladder cancer cells
   130085623 (si:dkey-13a21.4)
GTP-binding proteins [BR:rkg04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    130085623 (si:dkey-13a21.4)
SSDB
Motif
Pfam: Ras Roc RsgA_GTPase Arf MMR_HSR1 GTP_EFTU Gtr1_RagA AAA_24 AAA_5 AAA_16 NACHT IIGP AAA_7 AAA_22
Other DBs
NCBI-GeneID: 130085623
NCBI-ProteinID: XP_056107465
LinkDB
Position
Unknown
AA seq 224 aa
MTEWSTPHLKVILIGNSGVGKSSFMTRFVDHRFTKLYRATIGVDFLAKEVTIDKRSVILQ
LFLHQIWDTAGTERFHSLGTALYRGAHCCLLVFDVTSSVSFDALDVWKKEFLVQAFPSDA
TAFPFIVLGNKIDLDHREVSPNKAQQWCSEIGAEYFECSAKEDVGVDTTFHSAARAALHS
KATMWRMEKTSRLYRNNRIRSQIKNAIVEARTISWATVLCLSQH
NT seq 675 nt   +upstreamnt  +downstreamnt
atgactgagtggagcacaccacacttgaaagtgattcttatcggaaactctggagtgggg
aaatcttcatttatgacccgatttgttgaccatcgctttactaaattgtatcgtgccaca
attggggtagatttccttgctaaagaagtcactattgataaaagatcagtgattcttcag
ctgtttttgcaccagatctgggacactgcaggtacagagaggtttcattccctgggtacc
gcactgtatcgtggagctcactgctgcctcctagtgtttgatgttacctcgtccgtctcc
ttcgacgcactagacgtctggaagaaagagttcctggtgcaggcatttccttctgacgcc
actgccttccctttcatagtgctcggcaataaaattgacttggatcatcgtgaggtgtcc
ccaaacaaagcccagcagtggtgcagtgaaatcggagctgaatattttgaatgtagtgcc
aaggaagacgttggcgtggacacgacctttcacagtgcagcacgagctgccctgcactca
aaagccaccatgtggagaatggagaagacatccagattatacagaaacaacaggataaga
agccaaataaaaaatgctattgttgaagcaaggacaatctcttgggctactgttctgtgt
ttaagtcaacattaa

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