Rhinichthys klamathensis goyatoka (western speckled dace): 130085629
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Entry
130085629 CDS
T09701
Symbol
top1a
Name
(RefSeq) DNA topoisomerase I, like
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rkg03032
]
130085629 (top1a)
Enzymes [BR:
rkg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
130085629 (top1a)
DNA replication proteins [BR:
rkg03032
]
Eukaryotic type
DNA Topoisomerases
130085629 (top1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
130085629
NCBI-ProteinID:
XP_056107477
LinkDB
All DBs
Position
Unknown
AA seq
759 aa
AA seq
DB search
MSGDHSHNDSQIESGSRYNDSHKHKDKYKDKEHRHKDHKKDKEREKSKYSNSEHRDSSDK
KHRDKDKERLKLKDGSSSDKQKDKHKEKKKEERSFDGKPKKERENGFASPFIKSEPENDD
FYHSPKHEKSLKRERDDDDAEFKPKKIKTEDDRSEKKAKKRKQVEEDIKPKKKTKDKKGE
VATDGKKKAKKEPEDKWKWWEEERYTDGVKWKFLEHKGPVFAPPYDPIPSNVKFYYDGKH
MKLSPGAEEVATFFAKMLDHEYTTKDIFRKNFFKDWRKEMTSEEKSKISDLNKCDFSEMS
EYFKAQSEARKAMTKEEKLKIKEENERLLQEYGFCVMDNHKERIANFRIEPPGLFRGRGD
HPKMGMLKRRIRPEDIIVNCSKDSKHPKPPPGTKWKEVRHDNKVTWLVSWTENIQGSIKY
IMLNPSSRIKGEKDWQKYETARRLKKCVERIRSQYREDWKSKEMRIRQRAVALYFIDKLA
LRAGNEKEEGETADTVGCCSLRVEHLSLHQEMDGQEYVVEFDFLGKDSIRYYNKVPVEKR
VFKNLQLFMEDKEPEDDLFDRLNTSILNKHLQELMDGLTAKVFRTYNASITLQQQLSELT
NSEENVPAKILSYNRANRAVAILCNHQRAPPKTFEKSMQNLQTKIDAKKEQLADAKRELK
SAKADAKVRRDEKSKKAVETKKKAVQRVEEQLMKLEVQATDREENKQIALGTSKLNYLDP
RISVAWCKKFEIPIEKIYNKTQREKFAWAIDMAEKDFEF
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgagtggggaccattcccacaacgattcccagatcgagtcgggatccagatataatgat
tctcacaaacacaaagataaatacaaggacaaagaacacagacacaaggaccacaagaaa
gacaaagaacgtgagaaatcaaagtacagcaacagcgaacacagggactcctcggataaa
aagcacagagataaagataaagagaggttgaaactcaaagatggatcctcctcagacaag
cagaaggacaaacacaaagagaagaaaaaggaggaacggtcttttgatggcaagcccaaa
aaagagagggagaacggatttgcaagcccttttattaagtctgaacctgagaatgatgac
ttctaccactctcctaaacacgagaagtctctgaagagagaacgcgatgatgacgatgct
gagttcaagcccaaaaagattaaaactgaggatgacaggagtgaaaagaaggcaaagaaa
cggaaacaggtagaagaggacataaagcccaaaaagaagacaaaagacaagaaaggagaa
gttgccacagatggcaagaaaaaagcaaaaaaggagccagaagataagtggaaatggtgg
gaggaagagaggtacacagatggcgtgaaatggaagtttttggaacacaaaggccctgtc
tttgcgcctccatatgaccctattcccagcaatgtcaagttctattatgacggtaaacat
atgaaactcagccctggagcagaggaggtggccaccttctttgcaaagatgttggaccat
gagtacaccaccaaggatatatttcggaaaaacttcttcaaagattggaggaaggaaatg
acatctgaagagaaatccaaaatctcagatctgaataagtgtgacttttctgaaatgagc
gaatatttcaaagctcaatccgaagccaggaaggccatgactaaagaagagaaactgaaa
attaaagaggagaatgagcgccttctgcaggagtatggcttctgtgttatggacaatcac
aaagagcgcattgccaacttccgtattgagcctccaggcttgttccgtggcagaggtgac
catcccaaaatgggcatgctgaagcgtcgtatccgacctgaggacattatcgttaactgc
agcaaggactcaaaacatcctaaaccacctcccgggacgaagtggaaggaggtgcgtcat
gacaacaaggtgacgtggctggtgtcctggactgagaatattcaaggctctatcaaatac
atcatgctgaaccccagttcaaggattaagggagagaaggattggcagaaatatgaaaca
gcccgtcggttgaaaaagtgtgtggagcggatccgttcgcaataccgcgaagactggaaa
tcaaaagagatgaggatcagacaacgtgctgttgctctttacttcattgacaagctggct
ctgagagcaggtaatgaaaaggaggaaggagagaccgctgacacagtgggctgctgctca
cttagagtggaacatctatctctccatcaagagatggacggccaggagtatgtcgtggag
tttgacttcctcggtaaagactccattagatactacaacaaagtccctgttgagaagagg
gttttcaaaaatctccagctgttcatggaggacaaggagccggaggatgacctcttcgat
cgactcaatacatcgattttgaacaagcatcttcaggagttgatggatggccttacggct
aaagtgttccgtacttacaacgcctccatcacactgcagcagcagctgagcgaactcaca
aactcggaagaaaatgttcctgcgaaaatcctctcctacaatcgggctaaccgagcagta
gccatcctgtgtaaccaccagagggcaccacccaagacgtttgagaagtccatgcaaaat
cttcagacaaagattgacgcaaagaaggaacagcttgctgatgctaaaagagaactgaaa
agtgccaaggctgacgccaaagtacgcagagatgagaaatccaagaaggccgtggagacc
aagaagaaagccgtgcagagggtcgaggagcagctgatgaagctggaggtacaagccact
gaccgggaggaaaacaagcagattgccctgggtacctccaagctcaactacctggaccca
cgcatctcagtagcttggtgcaagaagtttgaaatcccgatagaaaagatctacaacaaa
actcagcgtgagaaatttgcctgggctattgacatggctgaaaaagactttgaattttaa
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