Rhinichthys klamathensis goyatoka (western speckled dace): 130085679
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Entry
130085679 CDS
T09701
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130085679
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
130085679
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
130085679
NCBI-ProteinID:
XP_056107557
LinkDB
All DBs
Position
Unknown
AA seq
1958 aa
AA seq
DB search
MQSFRERSGFHGNQHCYQQEPQELSRLESYRHHQSQSRQGYEPHSLAAAGLSTAGAGSKD
CYGQQTYPVYTSSSATQTKKTFRGAKTPNQHMQAGYSNHLGPGYTAQYISEGHLQQKWDE
SAQMTQFEQDMVGRLESGVSGSSQYLEQNMLAISQSQCHLPSQSSATTYTSPHQQGLPPN
PAPSPLMYPQGHLHFPQHSQPPSSSSSSYMEKCNTMPHGYKGYGIPTNAQYGRQLSNHSS
LKQSGYRPQNNYGYQQTPSRSGFEQGSLQGMSGTQENLQKFQHYNQPQQNYCITDISVRS
PEQYYQTCSPSSSHSPARSVGRSPSYNSTPSPLMPNPDSFQYGQPPINPGASSSTSLQDQ
NMLMPPNTHSSPSVNQQSQSYSGSMKERFSEKLLSNPSLWSLNALTSQVENISNNVQQLL
LSEALMANKKTSKRNPPKKGEDYRGQLKGMEESSCPDNQHGPPPPDAYSIPRSMTSELQE
GGYSSSTEDQMDRSYYYFGQDKGQAHTQTHPRLSLDTVSTCSLNSADDVSVRSGDSVRSL
QSVASEDNLNCDPRVQRVFTGEEPNSSLRCIRDERSPISVTAPSPMKQESNSPPDIKRSE
STLKENFEESAWTERMVDEEEIGQRKMSADHECKGDVTEKQEKWLEDEKSPSLFHQINKA
VLEEGYSYETETNIYQGLQNKYSLDKGNSEEMDCFSELNHKCNEGTEIKSEHFKLEPQTT
VEMLVKTSPSNSGTNLYFPDKEENSKSENSVDSLTCTEGPVDTLEEQPSVFSHNSTEVRD
EKENLTTSDEVINNRANTSEEMGNMPQVNTEPAESFNQDAPHRGSERRSAICDIAPQPHT
AKSGFSALNEKTTPLAQARDHHIDRSDAKVLEPDSPQLPGKSILHSAPSWADTPPSPKKG
DEDMEPGISCPSAVTPSAKPEPLAPSAHTRMFGKKHARGRRRPMHSSVGIRRQLSVEGDS
ALPSAQNPSMPSSKSALIPDQMETAHQNISSQTQKLVTESLPSRMCTRSYGSQSSPKVCP
QERRKPGPKPGPKPGSKLGVKPGPKPGPKAGPKSNIKPGPKPSPKLISKPGPKPEVMPSV
KPGPKLNLKCTGSTKNAKPGPKPGVKPGPKPGPKSGSKQVSKPGALAGEMLVPKPSQTTT
ESKPIEGSVTKGPGRPRGITSKIKSIKGNENIQIDHTKDHTKETHELILQDMSTGLTTDT
LVGVVDTTKDETVGSTLECTLESSCVKSLARDQKSMVLRSRKQTKEKLTEDKEQESDKSN
ETPSEMLLHSQIQNVTVDQSCKTESSNLELPKQKDVSTESLQQPNQEIVSIKRKYSLPSS
DPKKRKKGVQEIQVKTQQPPLDTVTRVCIAKGKRKRGQQLQAESVSTTVSAENPPTDDIS
DMPSLPPQCPTKTKYLPPRKGRGLKYEAMVQKITSPGSKKQPLNIQPDIVPDESTSKSVP
QVPEPKETMNASEVTHVEGEITSTSTQETQNTGIQTPRKKRRTWATVESSDAPDVALEAG
SLVINTPRLAKQRAIKNNHEMHLKQRKRRRKGTEPQESIPIVEKQEPNQTVILPPPPPSS
SLPEIGEQTQYEEQPTEFSLPQIKPKRGRRPSLKKRQEELSSQTEDDKVKEKKKAAPRKK
VLNVLKVVVRRPKIKTKCSNDLPPTVKGTLSDLHLALGDGKCSFRPYVHIDSPLELASLC
TIINRPEEEQMLSQARKKSAAKMKNLVTVTKAVSNSSVMLQGPLVNKSLIERCLTCCLCG
KPANYRELGDLCGPYYPEDCIPRKMLSSTHRNDFRQNSNCANETEVRCIAEQINSQSACA
KDAYQDSANEGHSWHPRRGKRAIREPLRSRPTLRMRFKRLLLLQSRLSGASPPAGEEGSG
SALQRLQMEAEAKEHWAHEACAVWTTGIILVAGKLFGLKEAVQKSANTKCSRCQGEGASI
CCSWKSCTQRYHYVCAKEMGCTFQEETFSIRCPDHKVL
NT seq
5877 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccttcagagagcggagtggtttccatggcaaccagcactgctaccagcaggaa
ccccaagaattatcgcgccttgagagttatagacatcatcagagccagtccagacagggc
tatgagccacactctctagctgctgcagggttgtcaacagcgggagcaggttctaaggac
tgttatggacagcagacctatcccgtctacaccagcagcagtgctactcagactaaaaaa
acatttagaggagccaaaactccaaaccagcacatgcaggctggctacagcaatcacttg
ggccctggatacacagcccagtatattagtgaaggtcacttgcagcagaaatgggatgag
tcagctcagatgacccaatttgaacaggacatggtgggacggctggagtctggggtcagt
gggtcatcccagtacctagagcagaacatgctagctatctctcaaagtcagtgccatctc
ccctcccagtcctctgctacaacctatacaagtccccatcaacagggcctcccacccaat
ccagcgccatctcctttaatgtatccacagggccacctccatttccctcagcactcgcag
cccccttcttcatcttcatcatcttacatggagaaatgtaatacaatgccacatggctac
aaaggctatggtataccaactaatgcacagtacggacgacaactcagcaatcacagcagt
ctaaagcagagtggatacaggcctcagaataattatggttatcaacaaactccatcaaga
tctggatttgaacaaggctccctgcagggaatgtctggtacacaggagaaccttcagaaa
ttccagcactacaatcagccccagcaaaactactgcattacagacatttctgtaaggtca
ccagaacaatactaccagacctgcagtccaagttccagtcattcacctgcaaggtctgtg
ggaagatctccctcatataactctacaccatcccccttaatgccaaatcctgactcattc
caatatggccaacctcccattaatcctggagcttcctcgtccacaagtttgcaagaccaa
aatatgttgatgcctcctaatacccattcatcacccagtgtgaaccaacagtcccagagc
tattctggctccatgaaagaacgattctcggaaaagctcctctccaaccccagtttgtgg
agcctcaatgccctgacatctcaggttgaaaacatctctaacaatgttcagcagctgctg
ctgtcagaggcccttatggctaacaaaaagaccagcaagcgaaatcctccaaaaaaggga
gaagactatagaggtcagttaaagggtatggaagagtcatcttgtcctgataaccaacat
ggtcctcctccacctgatgcatatagcattcccaggtccatgacatcagaactacaggag
ggaggatactctagcagcactgaggaccagatggacaggagctattactattttggtcag
gacaaaggtcaagcacacacccagacacacccgcgtctcagccttgacacagtgtccact
tgttccttaaactcagctgatgatgtatctgttaggtcaggtgactcagttcgaagtctc
cagagtgtagcctctgaagataatctcaactgtgaccccagagtacagagagtattcact
ggagaggagcccaacagctctctccgttgcattagagatgagaggtctcccatcagtgta
acagctccaagtcctatgaaacaagagagtaattcaccaccagacataaagcgttcagag
agtactctaaaggagaactttgaggagtcagcatggactgagaggatggttgatgaagag
gaaattggacaaagaaagatgtctgcagaccatgagtgcaaaggagacgtcactgaaaag
caagagaagtggttggaggatgagaaaagtccttctttatttcatcaaataaataaagca
gtattagaggaaggttactcatatgaaacagaaacaaatatctaccaaggtctgcaaaac
aaatacagtttagataaaggaaactcagaagagatggactgtttttctgaacttaatcac
aaatgtaatgaagggacagaaataaagtcagaacatttcaaattagagccacagaccact
gttgaaatgcttgtgaaaacatcgcccagcaattcaggcactaatctgtattttccagat
aaagaagaaaattcaaagagtgagaattcagtagatagcctcacgtgcactgagggacca
gtggacacccttgaggagcagccgtctgtcttctcccataattccactgaggtgagagat
gaaaaggagaatctgacaacctcagatgaggtcattaataatagagcaaatacatctgag
gagatgggaaacatgccacaagtcaacacagaacctgcagaaagctttaaccaggatgca
ccacacagaggcagtgaaaggaggtcagccatatgtgacattgcacctcagcctcacact
gccaagagtggcttctcagctctcaatgagaaaacaacacctttggctcaggctagggat
catcacatcgatcgtagtgatgcaaaggtactggagcctgactctcctcagttgccaggc
aagtcaatactgcactctgcaccatcttgggctgacaccccaccctctcccaagaaaggg
gatgaggatatggaaccagggataagctgtcccagtgcagtgactccctcagccaaacca
gagcctttggccccatctgcacatacgagaatgttcggtaagaaacatgcacggggcaga
aggagaccaatgcattcaagtgtaggaatcagaaggcagttaagtgtagaaggagacagt
gctctaccttctgcccaaaatcccagtatgccctccagcaaaagcgctcttattcctgat
cagatggaaactgcccaccagaatataagtagtcaaacacagaaacttgtgacagagagt
ttaccatcgcggatgtgcactcggtcatacggttcacaaagtagcccaaaggtctgccct
caagagagaaggaaaccaggtccaaagcctggtccaaaaccaggttcaaaactaggtgtg
aagccaggtccaaaaccaggtccaaaggctggtccaaaatcaaatataaaacctggtcca
aagcctagtccaaaattaatttcaaaacctggtcctaaacctgaagttatgcctagtgta
aaacctggccccaaactaaatttaaaatgcacagggtccacaaaaaatgcaaagcctggc
ccaaaacctggagtaaagccaggtcctaaacctggtccaaaatctggttctaaacaagtc
tcaaagcctggggctttagcaggagaaatgcttgttccaaagccaagtcaaaccaccaca
gagtcaaagccaattgaggggtcagtaactaaaggtccaggtagaccaagaggcatcacc
tccaagataaaatcaataaaaggaaatgaaaatattcagattgaccatacaaaagaccat
accaaggaaacgcatgaacttattttgcaagatatgagcacaggattaactacggacaca
cttgttggtgtggtggacaccactaaggatgaaactgtgggttccactttggagtgcact
ctagaaagcagttgtgtaaagtctttagcaagagatcaaaagtccatggtgctgagatca
cgaaaacaaacaaaagaaaagttgactgaagataaggagcaagagagtgataaatcaaat
gagacaccttcagaaatgctcttgcactcacaaatacagaatgttactgtggatcagtca
tgtaagaccgaatcttcaaatcttgaattacctaagcagaaggatgtatctacagaatca
cttcaacaaccaaatcaagagatcgtttccatcaaaagaaaatacagtttaccatcatca
gaccccaaaaagaggaagaaaggtgtgcaagagattcaagtgaagacacagcagccccca
ttagatacagtcacaagagtctgtattgcaaagggaaagcgaaagagaggacaacagttg
caagcagaatctgtaagcaccactgtatccgctgaaaaccctcccaccgatgacataagt
gacatgccttctttacctcctcagtgtcccactaaaaccaaatatttgcctcctcggaaa
ggcaggggacttaaatatgaggcaatggttcagaaaatcacatccccagggtccaaaaag
caacctttaaatattcaaccagatattgtaccagatgaatcaacatcaaaatcagtgcca
caggtaccagagccgaaggagacaatgaacgcctctgaggtgactcacgtggagggtgaa
ataacaagtacaagtacacaagagacccaaaacacaggaattcaaactccaaggaaaaag
aggagaacgtgggccaccgtagagagcagcgatgcaccagatgtagccctggaggccggg
agcctagttatcaacacaccaagactagccaaacagagagccattaaaaacaaccacgag
atgcatttgaagcaacgaaagaggagaagaaaaggcactgaaccacaagaaagcataccc
attgttgagaaacaggagcctaaccagactgttatattacccccacctccaccctcctcc
tctttaccagaaataggtgaacagacacagtatgaggagcaaccaacagaatttagctta
ccacaaataaaacccaaacgaggcaggcggccatcactcaaaaagagacaggaggaactc
tcaagtcaaacagaagatgacaaagtaaaggagaaaaaaaaggctgccccgagaaaaaag
gttctgaatgtcctcaaagttgtagtgcggagaccaaaaatcaagacaaaatgcagcaat
gatctccccccaacagtgaaggggacattatcagacttgcatctagcactaggagatggc
aaatgttctttcagaccatatgtacacattgacagccctttggagctagcatctctttgt
accatcatcaacaggcctgaggaagagcagatgctcagccaggcaagaaaaaagagtgca
gctaaaatgaaaaatctagtcactgttaccaaggcagtatcaaactcctcagtaatgctc
caggggcccttagttaacaaaagtctaattgaaaggtgtctaacatgctgcctatgtgga
aagccagcaaattacagagagcttggggacttgtgcggcccctattatcctgaggactgc
ataccacgaaaaatgctgtcttcaacacacaggaatgatttcaggcaaaacagcaactgt
gcaaatgagacagaggtcagatgcatcgcagagcagatcaactcacagagtgcatgtgcg
aaggacgcctatcaagatagtgcaaatgaaggacacagctggcatcccaggagggggaaa
agggcaattagggaaccgttaagatcccgccccaccttgcggatgagattcaaaagactg
ctgctgttgcagagcagacttagtggagcttctccccctgctggtgaggagggcagtgga
tcggctctgcagagattgcagatggaggctgaggcgaaagagcactgggctcatgaagct
tgtgctgtctggaccacaggcataatcctggtagcaggcaaactctttgggctgaaggag
gctgttcagaaatctgcaaatacaaaatgctccaggtgccaaggggaaggagcttccatc
tgctgcagctggaagagctgtactcagaggtaccattatgtctgcgccaaagagatgggc
tgcacgtttcaagaagagaccttctctattagatgtccggatcacaaggtgttgtaa
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integrated database retrieval system
