Rhinichthys klamathensis goyatoka (western speckled dace): 130085686
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Entry
130085686 CDS
T09701
Name
(RefSeq) 5'-3' exonuclease PLD4
KO
K16860
phospholipase D3/4 [EC:
3.1.4.4
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg00564
Glycerophospholipid metabolism
rkg00565
Ether lipid metabolism
rkg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
130085686
00565 Ether lipid metabolism
130085686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130085686
Enzymes [BR:
rkg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
130085686
Membrane trafficking [BR:
rkg04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
130085686
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PLDc_3
PLDc_2
PLDc
DUF7436
SACK1
UL45
Motif
Other DBs
NCBI-GeneID:
130085686
NCBI-ProteinID:
XP_056107572
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MSESSRLRDVKKRTSYQSLHDNYVSNTKESKCSLSVLLATGCLIVLGVLLAIVVIEKLKN
EDDTPACCNYTVPNEHSRIVLVESFPLSMDYGRNASAGESLFEAWKDLLSSATEQIDVAS
FYWSLTADDINVNSSADRAGREILEEFRALPARNVSVRVVTSIPTVALNSTDLQVLKENG
IQIRRVNFGRLTKGVLHTKFWIVDGKHVYIGSANMDWRALTQVKELGVVIYNSSGLAADL
HKIFQSYWVMGRSNTSLPDPWPSSYQTSISQEHPLPLNLSGVASRVYITASPPAFCPASR
TRDLDAILSAIGDARVFIHIAVMEFYPASKYFHHHGYWPVIEDALKRSAFERNVSVSLLV
SCGRDTDPSVWPFLRSLDALRSPSHNINIAVRLFIIPVGNQSHIPYSRVNHNKYMVTDRV
AYVGTSNWSADYFNTTAGVGLVVSQDALLGDSFHQQLNAVFARDWDSQFAVPLAELKLNH
DCVFSRSTP
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatcttcacgcttacgagatgttaaaaaacggacctcttatcagagcttacat
gacaattatgtgtcaaataccaaggaatcaaagtgctctctttctgtcctgttggccact
ggatgtttaatcgtcttaggggttttattggccatcgtggtaatagagaaattaaagaat
gaagatgacacaccggcatgctgtaactacaccgtccccaatgagcacagcaggatcgtt
ctcgttgagagtttccctctcagcatggattatgggagaaacgccagcgctggagaaagc
ctgtttgaagcctggaaggatcttctgtcttcggccacagaacaaatcgacgtggcgtct
ttctactggtctctgacggctgacgacatcaacgtgaactccagcgccgacagagctggc
agagagattttagaggagttcagagctttaccggcgagaaacgtgtccgtgcgagtggtg
accagcatcccgactgtggctctcaattcaacagacctacaagtcctgaaagaaaacgga
atacagatacgacgagtgaacttcggccgcttgactaaaggagtccttcatactaaattc
tggattgtggacgggaaacacgtttacatcggcagcgccaacatggactggagagcttta
acgcaggtgaaagagctcggtgtggtgatctataactccagtggtttggctgccgacctg
cacaagatcttccagtcgtactgggtcatgggtcggtccaacacttctctcccggatccg
tggccgtcctcctaccagacctccatcagccaggagcatccgctgccactcaacctcagc
ggtgtggccagtcgagtttacatcacggcctctccgccggcgttctgtcctgcctctcga
acccgagaccttgatgccattctgtcggccatcggagacgcgcgggtcttcatacacatc
gccgtcatggagttttatcccgcctccaagtacttccatcatcacggatactggccggtc
attgaagacgccctgaagcgctcggccttcgagaggaacgtgtccgtgagtctgctggtc
agttgcggtcgagacaccgacccgtccgtttggccgttcctccggtcattagatgctctc
cgctccccgtctcacaacattaacatcgcagtgaggctgtttattattcccgtgggaaac
cagtcgcacatcccctattccagagtcaaccacaacaagtatatggtgaccgacagagtg
gcgtatgtgggcacgtctaactggtcagctgactacttcaacaccactgccggagtgggc
ttggtggtttcccaggatgctttgctgggagactccttccatcagcagttgaatgccgtg
tttgcccgagactgggactcccagtttgccgtcccgctcgctgagctcaagctgaaccac
gactgtgtgttctccagatccacaccatag
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