Rhinichthys klamathensis goyatoka (western speckled dace): 130085835
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Entry
130085835 CDS
T09701
Symbol
tnfsf13b
Name
(RefSeq) tumor necrosis factor ligand superfamily member 13B isoform X1
KO
K05476
tumor necrosis factor ligand superfamily member 13B
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04060
Cytokine-cytokine receptor interaction
rkg04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
130085835 (tnfsf13b)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
130085835 (tnfsf13b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
rkg04052
]
130085835 (tnfsf13b)
04090 CD molecules [BR:
rkg04090
]
130085835 (tnfsf13b)
Cytokines and neuropeptides [BR:
rkg04052
]
Cytokines
Tumor necrosis fators
130085835 (tnfsf13b)
CD molecules [BR:
rkg04090
]
Proteins
130085835 (tnfsf13b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNF
XRN_M
Saf4_Yju2
Motif
Other DBs
NCBI-GeneID:
130085835
NCBI-ProteinID:
XP_056107769
LinkDB
All DBs
Position
Unknown
AA seq
272 aa
AA seq
DB search
MPAEDVGPGRGERRRLPWLFLVLVVAAITTSSLSVISLYHVLALKAEVEGLRTEVFRKRE
EQSGTLEESMKGAEKQTHQQEQEDIKGRIEYLQQTEMDDTTTDHTGMSKRTMGHVSNKAE
SQAFLQMMADNRKKTFQKEFALELSTAIPWHVGLKRGSALEEDQDTILVKEEGFFFIYSQ
LSFSQVYYTDSTFAMGHIVIRIKKNVVGDESQHVVLFRCIQSMNPVNHFNTCYTGGVVKL
DSGDRLELLIPRTHANISLDGDSTFFGAIKLA
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgaggatgttggtccaggtcggggtgaaaggagaaggctgccctggctgttt
ctggtgctggttgttgctgccatcaccacctcctccctgtctgtgatctccttgtaccat
gtgctggccttgaaggccgaggtggagggtttgaggaccgaggtgttccgcaagagagag
gagcaaagcgggacgctagaagaatccatgaagggggcagagaaacaaacccatcagcag
gaacaagaagacatcaaaggcagaattgagtatctgcagcagactgagatggatgatacc
acaacagaccatactggcatgtcaaaaaggacaatggggcatgtctcaaacaaagcagaa
tcccaagccttcttacagatgatggcagacaacaggaagaaaaccttccagaaagagttt
gctttggaattaagcacagccatcccatggcacgttggtctaaagcgcggctctgctctg
gaggaagatcaggacaccattttagtcaaagaggagggattcttctttatctatagccag
ctttccttttcccaggtctactatacagactcgacgttcgctatgggccacattgtgatt
cgtataaagaaaaatgttgtaggagacgagagtcagcacgtcgttttgttccgctgtatt
cagagcatgaacccagtcaatcacttcaacacctgctacactggaggtgtagtgaaactg
gactctggggacagactggaacttctgattcctcgtacccatgcaaatatctctctggat
ggggattccaccttcttcggagcaataaaactggcctga
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