Rhinichthys klamathensis goyatoka (western speckled dace): 130085892
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Entry
130085892 CDS
T09701
Symbol
itgb5
Name
(RefSeq) integrin beta-5 isoform X1
KO
K06588
integrin beta 5
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04145
Phagosome
rkg04148
Efferocytosis
rkg04510
Focal adhesion
rkg04512
ECM-receptor interaction
rkg04810
Regulation of actin cytoskeleton
rkg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130085892 (itgb5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130085892 (itgb5)
04148 Efferocytosis
130085892 (itgb5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
130085892 (itgb5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130085892 (itgb5)
04810 Regulation of actin cytoskeleton
130085892 (itgb5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130085892 (itgb5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rkg04515
]
130085892 (itgb5)
Membrane trafficking [BR:
rkg04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
130085892 (itgb5)
Cell adhesion molecules [BR:
rkg04515
]
Integrins
Integrin beta subunits
130085892 (itgb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
EGF_integrin
PSI_integrin
Integrin_b_cyt
I-EGF_1
EGF_2
vWA_SIBA-E
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
130085892
NCBI-ProteinID:
XP_056107859
LinkDB
All DBs
Position
Unknown
AA seq
816 aa
AA seq
DB search
MLNGVLILQGIMWKLCPFTRHPALLVYMVLEMFIHSVNGLNVCMSGSASSCEECFLIHPS
CAWCAQEDFGQARTLTSRCDFSQNLLKRGCDAPFIENPRSGSSLLLSKPLSSKGSGVTQY
DVIQIYPQKISLSLRPGDKISFEVQVRPVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTKL
AEEMRKLTSNFRLGFGSFVDKNISPFSYTAPKYQDNPCNGYKLFPNCVPTFGFRHLLSLT
DKVDRFNEEVQKQMVSRNRDAPEGGFDAILQAAVCKERIGWRKEAYHLLVFATDDVPHLA
LDGKLGGLVHPHDGQCHLNDKNEYSASTKMDYPSLALLGEKLAENNIFLIFAVTKRHYVL
YKNLTALIPGTTVEILDQDSKNIIQLIVNAYNNIRSKVELSVWDHPEDLSLAFTATCQDG
QPLTGLRKCADLKIGDTVSFNLTVDARGCPPKGTKKSFTIRPVGFKDRLEVSVDYRCDCS
CTYHTDPNSSRCHSAGTYSCGMCRCEPGYLGARCECQEGGVDYQHLSVCREAEGKQVCSG
RGECSCNQCLCYESEFGKIYGTFCECDDFSCARHKGTLCSGHGECHCGECKCHAGYIGDN
CNCSTETASCVSDDGKICSGRGSCVCGRCQCAEPGAFGDTCEKCPTCPDACGTKRECIEC
HLFNTGRLADNQTCQRMCKDEIMTVETLKTDAPNTVQCVYKTENDCVMKFTYSEHANGQS
VLTALKEPECAVAPNAMTVLLAVVGSILLMGIVLLALWKLVITVHDRREFARFQNARSRA
RYEMASNPVYKQSIPSHPMETVFHMHSSKSCNGGVH
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacggggttttgattttgcaaggaataatgtggaaactttgcccatttacacgt
cacccggctcttctagtttacatggtcttggaaatgtttattcacagcgtcaatggtctt
aatgtttgcatgagcggcagcgcctcatcttgtgaagaatgtttcctcattcacccgagc
tgcgcctggtgcgcgcaagaggactttggacaggccagaactctcacctcacgatgtgac
tttagccagaacttactgaaaagaggatgtgatgctccttttatagagaatcccaggagt
ggcagctctctgttgctgagcaaacccctgagctccaaaggttctggggtgacccagtat
gatgtcatccagatatacccacagaagatctctctcagcttaaggcctggtgacaagatt
tcctttgaggtacaagtgcgccctgtggaagactaccctgttgatttgtactacctgatg
gacctctcactctcaatgaaggacgatctggacacaatccgcaacctgggcaccaaactg
gctgaggaaatgaggaagctcactagtaacttccgccttggttttggctcttttgtggat
aagaacatctcacccttctcctacacagcccccaagtaccaggacaacccatgcaatgga
tataagttgttcccaaactgtgtccccacatttggctttcgtcacctcttgtctcttacg
gacaaggttgatcgtttcaacgaggaagtgcagaagcagatggtgtcgcgtaacagggat
gcaccagagggggggtttgatgccattctgcaggctgcagtttgcaaggagaggattggc
tggaggaaagaagcctatcatctcctggtttttgccaccgatgacgtcccccacttggct
ttggacggcaagctcggtggactagtgcatcctcacgatggacagtgtcacctgaacgac
aagaacgagtacagcgcttcaacaaagatggactacccttcacttgctctacttggagag
aaactggctgaaaacaatattttcctcatctttgcagtgaccaaaagacactatgttctt
tacaagaatctcactgcgttgatccctgggactacagtggaaattttggaccaagactcc
aaaaacattattcagctaattgtgaacgcatacaataacatcaggtcaaaagttgagctg
agcgtgtgggatcatcctgaagatctcagtctggccttcaccgccacatgccaagacggc
cagcccctgaccggcctccgcaagtgtgctgacctcaaaattggtgacactgtttccttc
aacctaactgtagacgctcgaggatgtcctccgaaaggcaccaagaagagtttcaccatc
aggcctgttggttttaaagaccgtctggaggtctctgtggactaccgctgtgattgcagc
tgcacgtatcacacagatcccaacagtagccgctgccactccgccggcacctacagctgt
gggatgtgccgttgtgagcccggctacttgggtgcccgctgcgagtgccaggagggtggg
gtcgactaccagcacctcagtgtctgccgtgaggctgagggcaagcaggtgtgcagcggc
cgcggagaatgcagctgtaaccagtgcctttgctacgagtccgagtttggcaaaatctac
ggcaccttctgcgagtgtgatgacttttcctgtgcccgacacaagggcacactgtgctca
ggtcatggggaatgccactgcggtgagtgtaaatgccatgctggttatattggagacaac
tgtaattgctctacagagacggcttcctgtgtgtcagacgacgggaagatctgtagcggg
cggggcagctgtgtgtgtgggcggtgccagtgcgctgagccaggggcgtttggggacacc
tgcgaaaaatgtcccacctgtccagatgcctgtggaacaaagagggaatgcatcgagtgt
catctttttaacacggggagactggccgacaaccagacctgtcagcgcatgtgcaaggat
gagatcatgaccgttgaaacccttaaaacggatgctcccaacaccgttcaatgcgtgtat
aagaccgagaatgactgtgtgatgaagttcacttattccgaacatgccaacggccaatcg
gtcctcaccgctcttaaagagccagaatgtgccgttgccccaaatgccatgactgtgctt
ctggcagttgttggcagtatcttgttgatgggcatcgtgctgctagccctctggaaacta
gtcattaccgtccacgaccgccgcgagtttgcacgcttccaaaatgcacgttcacgggcg
cgttatgagatggcatctaatcctgtttataaacagtccatcccctctcacccaatggag
acagttttccatatgcacagttccaagtcatgcaacggaggagtccactga
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