Rhinichthys klamathensis goyatoka (western speckled dace): 130085981
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Entry
130085981 CDS
T09701
Symbol
nup160
Name
(RefSeq) nuclear pore complex protein Nup160 isoform X1
KO
K14303
nuclear pore complex protein Nup160
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130085981 (nup160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rkg03019
]
130085981 (nup160)
03036 Chromosome and associated proteins [BR:
rkg03036
]
130085981 (nup160)
Messenger RNA biogenesis [BR:
rkg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130085981 (nup160)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
130085981 (nup160)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NUP160_120_M
Beta-prop_Nup120_160
TPR_Nup160_C
NUP160_helical
HEAT_Nup120
TPR_1
TPR_2
Motif
Other DBs
NCBI-GeneID:
130085981
NCBI-ProteinID:
XP_056108033
LinkDB
All DBs
Position
Unknown
AA seq
1394 aa
AA seq
DB search
MAGVLERSYIEICGFERETVSRFRQITLNLAGVGVSSGGVKYADSAGGFSYEDSGKLLSV
ASNRFIHWSTSGDTVQFVEQSLDTNLLNNAVRLRIPHCLLLPGGVYIQETLNNVLILIVT
SQSVHRLVLPHPSRMYHSDLVTELQMQSIFTDIGKLNLNEPAHSYVLPFAQGSHSTSPST
SAAWISHQGEALFALASPSGSIIIVTLPPHDQDGTVSILELKQSSMMQRLAGWMPTAIRG
DPSTSDVAISLAVHQLEDDTFVFALCQDHKLRMWSFKHQMCLLVTDMLEYMPVGRGDVKV
SPAQAHKLRLFFSSSIGLCLAVYLAVPKRSQFCVLQLVANENNRYSLDHISTLFSTQETV
VDFVLTATDIWAVWLDNDNQTMVKYISFEHNTTGMWNQVFVQPSPEEEVQIGEDQDPREI
YLDVLFSPLRFTASAIIKALQIYKRGTERYSDLSWEDLKKEVTVAVENELQSSVTEYEFC
QEDYRLLQVEFWSKFYACCVQYQDVLSTPLALHVSPSTAMVCVLKKGFVSFLLPCFAVDH
LYLSSDEYLISEEETPIAEDLDVSRDVLQLVQCLRLVNESLPEDLAYEMEKALDDLLSPE
KVSEKILDGLLASEVNVIQDIENKLQDIFNPIVAMNTLLRELDLEADAETDTRPTGQSLR
VRISLSQLYGSSVAASLICQAVCQTAMTRTLLCRDLLILQQLYLRNGDNVFLAGGNQLLQ
LQQDLIPRCSNLLCTYHLLKQMSLTLSSSVPLDILNADLQHLSVLELSDSTTPTSNRSVL
NPQTVVELFYQNVARKAIMSQIFSQQDVEGNQNMLHWPQMISSVLTLLCQFLWPSNPSFL
FPECLMGNCQYAQLQEYVRLVGSWCQVNVGSYRFVLGQCYLSSGEGQKALQCFQEAATEV
DKEEFLMKLTCSDEETAVTAPRLLYYNKVLRLLEDICLPELVINLATLAISEAANDERSQ
AALWTRIFKHHLDLGHNFQAYEALTQNPDPSRQLDCLRQLVVVLCERAQLRDLIQFPFVN
LHDEVVSIIESRARAVDLMTHNYYELLYAFHINRHNYRKAGTVMFEYGMRLGREVRTLRG
LQKQVNCYLAALNCLRLVHPDYAWIVQPSSGAAYERPGASPKRNYDGEFAASPVNQQIDI
LELKDLEKEYVLARSRLTLAQQDPPSAAIAGGASSQEMVALLVQTGLFDTSLTLCQTFNL
SLTPVFEGLTFKCIKLQYKGDQDQTEVWNWLAANQLPTIITTKESSATDEAWRLLAHYLE
KYPSQNAQYHRCVINKLLSHGVPVPDWLINAYKEVDAAALLRLYLNYDHLECAAELVLEY
VDALLGKGHQYFGIERPLSATASLVWLPYTSIDQLLRNLSESQINEKMYKNLKDKLSEYH
RLVDQSSRHRLMAR
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtgttctggagaggagttacattgagatctgcggttttgaaagagagactgtc
tcacgtttcagacagatcacactgaatctagcaggtgttggagtaagctctggcggtgtg
aagtatgcagacagtgctggtggattctcctatgaggacagtgggaaactcctctcagtg
gccagcaacagattcatccactggtccacttcaggtgacactgttcagtttgttgagcag
tcgctggacactaatcttctgaataatgctgtccgcttgcgtatcccacactgcctcttg
ctgcctggaggagtttatatacaagagacccttaacaacgtcctcattctgattgtcacc
agccaatcagtccatcgcctggttctgccgcacccctctcgcatgtaccacagtgatctg
gtcactgaactccagatgcagtccattttcacagacattgggaagctgaatttaaatgag
cccgcccacagttatgtgctcccgtttgcacagggaagtcactcgacctctccgtccaca
tctgccgcctggatcagtcatcaaggggaagctctctttgctcttgcctcaccgtcgggc
agcattattatagtcacgttacctcctcacgatcaagatgggaccgtgtcaattctggag
ttgaaacagagttcgatgatgcagcggttggccggctggatgcctactgctatcagggga
gatccgagcacgtctgatgtagccatcagtctggctgtccaccagctagaggacgacacg
tttgtattcgcgctgtgtcaagatcataagctgcggatgtggtcatttaagcatcagatg
tgtctgttggtgactgacatgctggagtatatgcccgtgggtcgtggggatgtgaaggtt
tctccagcacaagctcataagctccgactattcttctcctcatccatcggtctgtgtctc
gccgtctacctcgcagttcccaaacgcagtcagttctgtgtgctgcagctggtggccaat
gagaacaatcgctacagcctggatcacatctcaacactattctcaacacaggagacagta
gtggattttgtcttgacggcaactgatatttgggctgtttggctggataatgacaaccag
actatggtgaagtacatcagttttgagcataacacaacagggatgtggaaccaggtgttt
gtccagccatcaccagaggaggaagttcagattggtgaagaccaagacccacgggaaatc
tatcttgatgtacttttttcaccactgcgcttcacagcctcagccatcattaaagctcta
cagatttacaagcgaggtacagagcgatattctgacttatcatgggaggatctgaagaaa
gaggtcactgtcgcagtggaaaatgagcttcagtccagtgtgaccgagtacgagttctgt
caggaagactaccgcttgctgcaggtggagttctggtcgaagttttacgcatgttgcgta
cagtaccaggacgttctgtccacgccactcgccctgcatgtgagcccttccacagccatg
gtctgcgtcctcaagaagggctttgtgtctttcctgttaccctgctttgcagtcgaccat
ctttacctctcctcggatgaatacctgatttctgaagaggagactccaattgctgaggac
ttggatgtgagccgtgacgtcctgcagctggttcagtgtctgcgcctggtgaacgagtct
cttccagaggacttggcctatgagatggagaaagctctcgatgacctactgtctccagag
aaagtgtcagagaaaatactggacggtcttctggccagcgaggtgaatgtgattcaggat
attgaaaacaaactgcaagacatctttaaccccattgttgccatgaacacactgctccga
gaactggaccttgaagctgatgcagagacggacaccagacctactggtcagtctctgaga
gtgcgtattagtctctctcagctgtacggcagcagtgtggccgctagtctgatctgtcaa
gctgtgtgccagactgccatgacccgaactctcctctgcagagatctgctcatcctgcag
caactctacctgcggaatggagacaatgtgtttcttgcgggcggtaatcagttactgcag
ctgcagcaagacttgattcctcgatgctctaatctcctttgcacatatcatctgctcaaa
cagatgagcctgacactttcctcatccgtcccactggacatactaaatgccgatcttcag
catctgtctgttctggagctgtctgactcaacgactcctacttccaacagatcagtgttg
aatcctcaaactgttgtggagttgttctaccagaatgtggcccgtaaagccatcatgtct
cagatcttctcccagcaggatgtggagggcaaccagaacatgttgcactggccacagatg
atctccagtgtcctgacactactctgtcagttcctctggcccagcaatcccagtttcctc
tttcctgaatgcctgatgggaaactgccaatatgcacaactgcaggaatatgttcgatta
gttgggtcctggtgccaggtgaatgtgggatcctatcgttttgttttgggtcaatgctat
ctgtccagtggtgaggggcaaaaggcattgcagtgtttccaggaagcagccactgaggtg
gataaagaagagtttttaatgaaactcacgtgttcagatgaggagacagccgtgaccgcc
ccacgattactttattacaacaaggttttacggttattggaggatatttgtttgcctgag
cttgtgatcaatttggcaacgctggccatatctgaagctgccaatgatgagagaagccag
gctgctctgtggactcgtatattcaagcatcatctggatcttggacacaattttcaggcg
tatgaggccctgacacaaaaccctgatcctagcaggcagctggactgtctccgacagctg
gtggtggttctgtgcgagcgtgctcaactcagggatcttatccagttcccatttgttaat
ttacatgatgaggtggtcagcattattgagtctcgcgcaagagctgtggacctcatgact
cacaactattatgagcttctatatgcttttcatatcaatcgtcacaactataggaaagcc
ggtacagtgatgtttgagtacggcatgcgtctgggccgtgaggtacgaactctccgtggt
ctccagaaacaggtgaactgttacctcgctgccctcaactgcctgcgtcttgttcatccg
gactatgcttggattgtgcagccctcttctggagcagcgtatgaacgaccaggcgcatca
ccaaaaaggaactatgatggtgaatttgctgcaagtccagtaaatcaacagattgacatt
cttgagctgaaagacttggagaaagagtatgttcttgcccggagtcgtctaacgttagct
caacaggaccccccctcagcagctatcgcaggaggtgcgtcttcacaagagatggttgct
ctgcttgtccaaacaggtctttttgacacatccctgacgctgtgtcagacctttaactta
tcccttacacctgtctttgagggactgacattcaagtgtatcaaactgcaatataaaggt
gatcaggaccagacagaggtgtggaactggcttgcagccaatcagctgccaactatcatt
actactaaagagtccagcgcaacagatgaagcttggcggcttttagctcattatttggag
aagtatccctcacagaatgctcaatatcaccgctgtgtcatcaacaagctgctgtcacat
ggggtgccagtgcctgattggctgatcaatgcctacaaggaagttgatgctgcagcgctg
ctgcgtctctatctgaactatgatcacctggagtgtgcagcggagcttgtgctggagtat
gtggatgctttgcttggaaagggtcatcagtattttggaatagagcggccgctttcagct
acagcatctctggtgtggctcccttatacatctatcgaccagctcttgagaaacctcagt
gaaagtcagatcaatgaaaagatgtacaagaatctgaaagataaactatcagaatatcac
agactggtggatcagagcagcagacacagacttatggcccgttaa
DBGET
integrated database retrieval system
