Rhinichthys klamathensis goyatoka (western speckled dace): 130086020
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Entry
130086020 CDS
T09701
Symbol
notch3
Name
(RefSeq) neurogenic locus notch homolog protein 3
KO
K20995
Notch 3
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04330
Notch signaling pathway
rkg04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
130086020 (notch3)
04371 Apelin signaling pathway
130086020 (notch3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
Notch
NODP
NOD
Ank_3
EGF_3
Ank_4
Ank_5
EGF_DL_JAG
EGF_Teneurin
DUF7472
cEGF
Motif
Other DBs
NCBI-GeneID:
130086020
NCBI-ProteinID:
XP_056108095
LinkDB
All DBs
Position
Unknown
AA seq
2470 aa
AA seq
DB search
MGNNSLWIFLSILYLVQISEGLRCVDTHRPCENGGMCVDSRCLCRPGYIGLLCQHLDPCH
RSPCLNGAACKSQVANGIPQYTCVCQRGFRGQDCSLIDACATNPCANGARCTNWNNHYNC
SCPPGYQGKNCRNDIDECRKPGKCLNGGICMNTHGSFRCDCLAGYSGRTCEVPTQPCAPS
QCLNGGTCHQTGDHTYECACLPGFRGHNCEENVDDCPGHKCMNGGICVDGVNTYNCQCLP
EWTGQYCAEDVNECLMQPNACHNGGTCFNTIGGHTCVCVNGWTGDDCSENIDDCATAVCF
NGATCHDRVASFFCECPVGKTGLLCHLDDACVSNPCNEGAVCDTNPLNGRAICTCPAGFV
GGACNQDMDECSIGANPCEHFGKCVNTEGSFQCQCGRGYTGPRCEIDINECLSMPCQNDA
TCLDRIGEFTCICMPGYQGKYCEVDVDECESNPCVNDGICRDMVNGFTCTCQPGFTGTMC
QIDIDECASTPCQNGAKCIDRPNGYECRCAEGFEGRLCESNIDNCKPDPCHHGTCIDGIA
SYTCNCDPGYTGYRCENQLNECHSNPCQNGGKCVDRVNKYICQCQHGTSGTNCEINFDDC
ASNPCDYGICKDGINRYECVCKPGFTGSQCKDEIDECQSNPCRNGGTCVDDENGFHCQCP
EGFHDPFCYSQVDECASSPCLHGTCRDDPNGYRCDCEPGWVGKNCDLDRNDCLPSPCQNA
GTCFDQLNGFTCKCRQGFRGNLCQVNINECASSPCLNQGTCVDGVASFTCLCKPPYSGPT
CAELLTPCSPNPCANHASCVNTPDYLDYHCNCQPGWQGQLCNNDINECTSNPCKNRGTCT
NTLGGYVCSCRAGYTGPNCETDINDCSPNPCLNGGSCTDGVNSYRCSCLPGFTGARCAAE
VNECQSGPCKNGGTCTDYVNSYTCTCKPGFTGLFCETNIADCTESSCFNGGTCTDGINGF
KCTCRSGFTGDYCQYEVNECNSQPCLNGGVCQDALESYRCSCPKGYTGPRCQYPVDWCRP
SNPCKNGGRCRQKDASFTCDCLGGWSGRYCDIPGVSCEIAARQRGLQTDELCHYGGHCVN
TGNTHYCKCPADYTGSYCDSQFDHCEDKPCLNGATCRSYMGGFTCDCMPGYEGSNCETEA
NECQSHPCQNGGTCIDLVGHYICSCPPGTLGVLCEINEDDCAIPSWPRGIAKCQNNGTCV
DRVGGYRCNCPPGFTGERCEGDINECLSNPCNPSNSLDCIQLPNDYQCVCKPGFTGRGCQ
NRFSVCESQPCMNGGVCSLTGNSPLGYTCTCQLGYAGANCERSMNCKELPCYNGGSCTLT
SRGARCTCILGFGGALCQHRSSEGCSFKPCRNGGLCTEEIGFPFFHCQCINGWSGKRCEQ
EARLLAPLTPQCPIADCHGKANDGVCDKECNSFACRWDGGDCSLAVNPWARCTDPRCWRL
FNNSQCDEFCDNAECLYDNFDCKNKEKVCNPIYETYCTDHYADGLCDQGCNTEECGWDGL
DCAGKIPEDLAEDVLVIVVLLPPDELLRTQTAFLQKLSAILRTTLRFRLDQNGEYMIRPY
TGRETRIKRELHPQQEVIGSVVYLEIDNRLCSQGSDDCFRNANSAAEYLGALQACEMLRF
PYPLKEVRSVTIEETDKIPEWGKLLLVGVASLFLLVILMAGMLIARRKREHSTLWFPEGF
FLKKETSSNKNRREPVGQDSLGMKHMPKTVEESLLADHSDQWIDTDCPEAKRLKVEEPSI
LSDGEDAVDSRQWTQHHLAAADIRMPPSMALTPPQGEFDSDCMDVNVRGPDGFTPLMLAS
FCGGGLEPEVTEDDDSEECSANIISDLIYQGASLAAQTDRTGETALHLAARYARADAAKR
LLDAGADANAQDNTGRSPLHAAVAADAQGVFQILIRNRATDLDSRMYDGSTALILAARLA
VEGMVEELITCHADVNAVDEIGKSALHWAAAVNNVEATVALLKNGANKDMQDLKEETPLF
LAAREGSCEAVKMLLAHFANREITDHMDRLPRDIAQERMHHDIVQLLDEYNTVRSPQGHA
GAGHHLSGSHTLSPLMCPPSNFLQGLKSTPQGKKNRRPGAKGMVGQHAASLKDSAKSRNK
RLTLDMQSALLESSVTLSPVDSLDSPRGGANNAGYITNPTSPAAMPTPGLFHSSMSVPST
PMVHSSILDGTSPFAVSLAQLSDLGDGGLSMQGRVAMQGGSINQGPHNYVLNAGQMSLNM
GMVSPVSVPFDWHSRMTPSSQCSQPMVNLVHPASSQAGMHPQTPTLQQTSMLLHQQQVFR
NAQQPILQPTPVSNTPSISPVKLTPIAEQQPQQLHSHALTNPNLTRMGSSTPPTPQQAQP
PPAFYQSQQPQAQPPQATASPQASQAQAISTQAPPAQGSGSTAGPEDYPTPPSQHSYTSA
MDATPKHYLHVPSEHPYLTPSPESPEAWSSPSPHCVSDWSDSTPSPAVTASAQTQISHVQ
ESNGKMQVFA
NT seq
7413 nt
NT seq
+upstream
nt +downstream
nt
atggggaataacagtctttggatatttctgtcaattttatatctggtgcaaattagcgaa
ggattgcgctgcgtggatacacacaggccgtgcgaaaatggaggaatgtgtgtcgattca
agatgcttatgccggcctggttatattggtttactctgtcagcatctggacccctgtcat
cgctcgccttgtctaaacggagcagcttgcaagagccaggttgctaatggaatcccacag
tacacctgtgtgtgccagcgaggtttcagaggtcaggattgttccctgattgatgcatgt
gccacaaatccctgtgccaatggtgcccgttgtactaattggaacaatcactacaactgc
tcgtgcccacctgggtatcagggaaaaaactgtcgcaatgacattgatgagtgccgcaaa
cccggaaaatgccttaatggtggaatctgcatgaacacccatggctcattccgttgcgac
tgccttgctgggtacagcgggcgcacatgcgaggtccccacccagccctgcgccccttca
cagtgtctcaacgggggcacctgccatcagaccggtgaccacacctacgaatgtgcttgc
ttgccaggcttcaggggacacaactgcgaggagaacgtggatgactgccctggacacaag
tgcatgaatggtgggatctgtgtagatggtgtcaacacatataattgtcagtgtctgcct
gagtggacaggccagtattgtgctgaggatgtcaacgagtgtctcatgcagcccaatgct
tgtcacaatggcggtacatgcttcaacaccattggagggcacacatgtgtatgcgtcaat
ggctggacgggggacgactgcagtgagaacattgatgactgtgccacagctgtctgtttc
aacggcgccacatgtcatgaccgcgtggcctccttcttctgcgagtgcccggtgggcaaa
actggtctgctctgtcatctggatgatgcttgtgtcagtaacccctgtaatgagggggcc
gtgtgtgacactaaccctctgaacggccgtgccatctgcacctgccctgctggctttgtt
ggcggagcctgcaaccaagacatggatgagtgttctattggtgccaacccctgcgagcat
tttgggaagtgtgtaaacacagagggttcgttccagtgccagtgtggacggggctacacc
ggccctcgctgtgagattgatatcaatgagtgtctgtccatgccctgccaaaacgacgcc
acctgcctggaccgcatcggcgagttcacatgcatctgtatgcctggctatcaggggaag
tactgcgaggtggacgttgatgaatgcgagagcaacccctgtgtaaacgacggcatctgc
cgagacatggttaatggcttcacctgcacctgtcagccagggtttactggcaccatgtgt
cagatcgacattgatgagtgcgccagcactccctgccaaaatggagccaagtgcattgac
cgacccaatgggtatgaatgccgctgtgctgaaggatttgagggaaggctgtgtgagagc
aacatcgataactgcaagcccgacccgtgccaccatggcacttgcatagatggcattgcc
agttacacttgtaattgtgatcctggctacactggctaccgctgcgagaaccagctcaac
gagtgccacagcaacccctgccagaatggcggcaaatgtgtggaccgagtcaacaagtat
atctgccagtgtcaacatggcacctcaggtaccaactgtgaaatcaactttgacgactgt
gctagcaacccatgtgactacggaatctgcaaagatggcataaaccgctatgaatgtgtc
tgcaaacctggctttaccggatctcaatgtaaagacgagattgatgagtgccagtcgaac
ccttgtcgcaacggagggacctgcgtagatgatgagaacggcttccactgccagtgccct
gaaggtttccacgacccattctgctattcacaagtggatgagtgtgccagcagcccatgt
ttgcacgggacctgcagggatgaccctaatggctatcggtgtgactgtgagcctggatgg
gtgggtaagaactgtgacctagaccgaaacgattgtttacccagcccctgccagaatgca
ggcacctgtttcgaccagctcaatggtttcacctgcaagtgtcggcagggttttagaggt
aacttatgtcaggtgaacatcaacgagtgtgcctccagcccgtgtctaaatcaaggcacc
tgtgtggatggagtcgccagtttcacctgtctctgtaagccaccttatagtggtcccacc
tgtgcagaactgcttacaccttgctctcccaacccttgtgccaaccatgcttcctgtgtt
aacacacccgactacctggactaccactgtaactgccaacctgggtggcagggtcagttg
tgtaacaatgacataaatgaatgcacctctaacccatgtaagaaccgcgggacctgtaca
aatactttgggtggctacgtgtgctcctgccgtgctggctacactggtcccaactgtgaa
actgatatcaatgactgttcaccaaacccctgtctgaatggaggatcctgtacagatgga
gtgaactcataccgttgcagctgtctgccaggcttcaccggggcacgctgtgctgccgag
gtgaatgagtgtcagagcggtccctgcaagaacggaggcacttgcaccgactacgtcaac
agctacacatgtacctgcaaaccaggtttcacaggccttttctgtgagaccaacatagca
gactgcactgaaagctcctgttttaatggaggaacctgcactgatgggatcaacggcttc
aaatgcacttgccgctcaggattcactggagattactgccagtacgaggtgaacgagtgt
aactctcaaccgtgccttaatggaggagtttgtcaagatgccctggagtcatatcgctgc
tcatgtccgaaaggttacactggcccccgttgccagtatccagttgattggtgcaggcct
tctaacccatgcaagaatgggggtcgctgcagacagaaagatgcctccttcacatgtgac
tgtttgggtggctggtcaggtcgttattgtgacatcccaggagtgtcctgtgaaattgca
gccagacagagaggtctccagacagatgagctttgccactatggtggacactgtgtcaat
actggcaacacacactactgcaaatgtcccgcagactacacaggcagttactgtgattcc
cagtttgaccactgtgaggacaaaccttgcctcaatggcgccacctgcaggagctacatg
ggaggattcacctgtgattgtatgcctggttatgaggggagcaactgcgagacagaggcc
aatgagtgtcagtctcacccatgtcaaaatggaggaacctgcattgacctggtgggacat
tacatctgctcctgccctccaggaacactaggggtcctctgtgagataaatgaggatgac
tgcgcaattccctcatggccccgagggatagccaagtgtcaaaataacggcacatgtgtg
gacagggttggagggtacagatgtaactgccctccaggcttcactggagaacgctgtgag
ggagacatcaacgagtgcctttccaatccctgcaacccctccaacagcttggactgcata
cagttgcccaatgactaccagtgtgtgtgcaagccaggcttcacaggacgagggtgtcag
aatagattcagtgtgtgcgagtctcagccctgtatgaacggaggagtgtgctctttgacc
ggcaactcaccgctgggatacacttgcacctgtcagcttgggtatgcaggtgctaactgt
gagaggagcatgaactgcaaagagctgccttgctacaacggtggcagctgtactcttacc
tcacgaggtgcacgttgcacctgtattctgggatttggcggggcactgtgtcagcaccgc
agcagtgagggctgctccttcaagccctgtcgaaatggaggcttgtgtacagaggaaatc
ggcttcccttttttccactgccagtgcatcaatggctggtcaggcaaacgatgcgaacag
gaagccaggcttctggcacctcttactcctcagtgccctattgctgattgtcacggcaag
gccaatgacggtgtgtgtgacaaagaatgtaattcgttcgcctgccgctgggatggaggt
gactgctctcttgctgtgaacccttgggcacgctgcacagaccctcgctgctggcggctc
ttcaacaacagccagtgtgatgagttctgcgacaatgcagagtgcctgtacgataacttt
gactgcaagaacaaagagaaagtctgcaaccccatctatgagacatactgtaccgaccat
tacgcagatgggctctgtgatcaaggctgcaatactgaagagtgtggctgggatggactg
gattgtgcagggaagattccagaagatcttgcggaagatgtgctggttattgtagtcctg
ctgcctccagatgagctgctaaggacacaaactgctttcctgcagaaactaagtgcaatc
ctccgcaccacattgcgtttccgccttgatcagaatggagaatacatgatccgaccctat
acagggcgtgagacacgcattaaacgagaacttcatcctcagcaggaggtcattgggtcc
gttgtatacttggagatagacaacaggctatgctcccagggctcggatgactgcttccgc
aatgctaacagcgctgctgaatatctgggtgctctgcaggcttgtgagatgttgcgtttt
ccataccccctcaaagaagtacgcagtgtaacaattgaagaaactgataagattcctgaa
tggggtaagctactgctagtaggggtggcttctctgttcttgttggtaatcttgatggcg
ggcatgttgattgcccgtcgcaaacgtgagcacagcacactctggttccctgagggcttc
ttcctcaagaaggaaacgagcagtaacaagaaccgcagagaacctgtgggccaagactcc
ctgggcatgaaacacatgccaaaaacagtggaagagtctcttttggctgatcacagtgac
cagtggatagacacagactgccctgaggctaaaagacttaaggtggaagagcccagcatt
ctgtcagatggtgaggatgcagttgacagcagacagtggacacagcatcacttggcagcg
gcagatatccgtatgccaccttccatggctctcacacctccacagggagagtttgacagc
gactgcatggacgtcaatgtccgagggcctgatggcttcacacccctgatgctggcatcc
ttctgtggaggtgggctggagcccgaagtgactgaagatgatgactcggaagaatgctca
gccaacatcatatccgatctcatttaccaaggagcatcgctcgcagctcagaccgaccgc
actggagagactgctctgcacctggctgcacgctacgccagagctgacgcagctaaaaga
ctcttggatgctggggctgatgcaaatgcacaggataacacaggccgctcacctctgcat
gcagctgtagcagctgatgctcagggggttttccagattctgatcaggaaccgcgccaca
gacctagactcacgcatgtatgatgggtccactgctctgatccttgctgcccgtctggca
gtagagggcatggtggaagagttgatcacctgccatgctgatgtcaatgctgttgatgaa
ataggaaagtcagctttgcactgggcagcagcagtcaataatgttgaagctacagttgcc
ttgttgaagaatggtgccaataaagatatgcaggacctcaaggaggagactccactattc
ttggctgccagggaaggaagctgtgaggcagtgaagatgttgttggctcactttgccaac
agggagataacagatcacatggacaggctccctcgagatattgcccaggagcgcatgcac
cacgacatcgtacagctgctggatgaatataacactgtgagaagtccgcagggccatgca
ggggcaggtcaccacctgtctggtagccatacgctctcaccactcatgtgccctcccagc
aacttccttcaagggctgaaaagcacccctcagggtaagaagaaccgtcgcccaggggct
aaagggatggttgggcagcatgctgccagtctgaaagattcagccaaaagccgcaacaaa
cggctgacgctagacatgcagagtgctttgctggagagctctgtcacgctttcccccgtt
gactcgctggattcgccgcgcggaggcgccaacaatgccggctacatcaccaatccaacc
tcaccggccgccatgcccactcctggccttttccactcctccatgtctgttccttccact
cccatggtgcacagcagtatcctggatggcaccagcccttttgcagtctccctggcacag
ctgagcgacctgggtgacggagggctctcgatgcaggggcgtgtggccatgcaaggaggc
agcatcaaccaaggcccccacaactacgtgctgaatgccggccagatgagcctcaacatg
ggcatggtaagtccagtaagcgtcccgtttgactggcacagccgcatgactccatcttct
cagtgcagtcagcccatggtcaacctggtgcatccagcaagtagccaagcaggcatgcac
cctcagacaccaaccctgcagcaaaccagcatgctcttgcaccagcagcaggttttccgt
aatgcccagcagcccatcctgcagccaacacccgtctccaacacgccctctattagcccg
gtcaaactgacgcccattgcagagcagcaaccgcagcaacttcacagccacgcccttacc
aaccccaacctcacccgcatgggctcctccactcccccgacaccacagcaggcacagcct
cctccagccttctaccagtcacagcagccgcaggctcagcctccgcaggccacagcatcc
cctcaggcctcgcaagcacaggctatctcgactcaggcacccccagcacaggggagcggc
agcaccgcaggcccggaggattaccccactccgccctcccagcacagctacacctctgcc
atggatgcgacgcccaagcattacttgcatgtgcccagtgaacatccttacctgacccct
tctccagagtctccagaggcctggtctagcccttcccctcactgtgtgtctgattggtct
gactccaccccgagcccggccgtcacggcttctgctcaaacccagatttcccatgtccag
gagtccaatgggaagatgcaggtgtttgcttga
DBGET
integrated database retrieval system
