Rhinichthys klamathensis goyatoka (western speckled dace): 130086083
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Entry
130086083 CDS
T09701
Symbol
myo1b
Name
(RefSeq) unconventional myosin-Ib isoform X1
KO
K10356
myosin I
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
130086083 (myo1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rkg01009
]
130086083 (myo1b)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130086083 (myo1b)
03036 Chromosome and associated proteins [BR:
rkg03036
]
130086083 (myo1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rkg04812
]
130086083 (myo1b)
04147 Exosome [BR:
rkg04147
]
130086083 (myo1b)
Protein phosphatases and associated proteins [BR:
rkg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130086083 (myo1b)
Membrane trafficking [BR:
rkg04131
]
Endocytosis
Phagocytosis
Others
130086083 (myo1b)
Others
Actin-binding proteins
Myosins
130086083 (myo1b)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
130086083 (myo1b)
Cytoskeleton proteins [BR:
rkg04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
130086083 (myo1b)
Exosome [BR:
rkg04147
]
Exosomal proteins
Proteins found in most exosomes
130086083 (myo1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
Myosin_TH1
IQ
nSTAND3
AAA_22
AAA_16
NPHP3_N
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
130086083
NCBI-ProteinID:
XP_056108197
LinkDB
All DBs
Position
Unknown
AA seq
1165 aa
AA seq
DB search
MEVKTSLLDNMIGVGDMVLLEPLSEDTFIENLKKRFDHNEIYTYIGSVVISMNPYKSLPI
YTAEKVEEYRNRNFYELSPHIYALADEAYRSLRDQDKDQCILITGESGAGKTEASKFVMS
YVAAVCGKGQEVNKVKEQLLQSNPVLEAFGNAKTVRNDNSSRFGKYMDIEFDFKGDPIGG
VISNYLLEKSRVVKQTRGERNFHVFYQLLSGASDDLLKKLKLDRDFSKYNYLSLDSATVN
GLDDAASFRTVRNAMQIVGFMEDEVQSILELVAAVLKLGNIEFKPESRVNGFDESRVKDK
NDLKEMCELLGIEQSVLERAFSFRTVEAKMEKVSTTLNVAQAYYARDALAKNLYSRLFSW
LVNRINESIKAQTKKPKKVMGVLDIYGFEIFEDNSFEQFIINYCNEKLQQIFIELTLREE
QEEYVREGIEWTNIEYFNNAIICDLIENNKNGILAMLDEECLRPGTVTDETFLDKLNTVC
AEHQHFESRQSKNSKFLTDHSLPHNCFRIQHYAGKVLYRAEGFVDKNNDLLYRDLSQAMY
KANHSLMKLLFPEGNPAKVNLKRPPTAGFQFKASVGTLMKNLLTKNPNYIRCIKPNDKKA
AHIFTDSLVCHQVRYLGLMENVRVRRAGYAFRQAYESCLERYKMLCKQTWPHWRGPAREG
VKVLLTGLQVHAEEFAYGRSKIFIRNPRTLFFLEEKRRQCLEDLAALIQKIYRGWKCRTH
FLLMKKSQVVVSAWYRRFAQQKKYQNIRCSALVVQSFIRGWKARKLLRELKHKKRCEQAV
TTISAFWHGTQARWELRRLKEEARNKHAVSVIWAAWLGTKARRELRRLKHEACSKQAVSV
IWACWQGTKARRELKRLKEEARRKHAIAVIWAYWLGLKVRREYRKFFRANAGKKIYDFTI
QRIMQKYFLGLKKTMPSMSPIDKSWPARPYGFLDETHKELRRVFHLWRCKKYRSQFTEEK
KATYEEKLAASELFKDKKALYPSSVGQPFKGDYVEITKNPKYQKLNSLAEDRVLLADVVS
KINRANGKGAPRIFLLTKKSLVLADQKTGQVKASVPLLDLSSVSVSTQNDGFFALKLKEG
AVSAAKGDFLLSSDRLIEIITKLHRTGAASADRNQIKIDISDEFLVQFKQDKVCVKFIQG
TPKNGNSVACKRKNNRLLEVSVPSP
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgaagacatcacttctcgacaatatgataggggtgggcgatatggtcctcctt
gagcccctgtcagaagacaccttcattgagaatctaaagaaacggttcgatcacaacgag
atctatacatacattggcagtgtggtgatctcaatgaacccctacaagtccctgcccatc
tacacagcagaaaaggtggaggagtatcgcaacaggaacttctatgagctcagtccacac
atttatgctctggcagatgaggcctaccggtccctgcgggatcaagataaagaccagtgt
attctcatcactggagagagcggggcaggaaagacggaggccagtaagtttgtgatgtca
tatgtggcggcagtgtgtgggaagggccaggaggtgaacaaagtgaaggagcagctgctt
cagtccaatcctgtgcttgaagcttttggtaacgccaaaaccgtgaggaatgacaactcg
tctcgatttggaaagtacatggatatcgagtttgacttcaaaggagaccccattggtgga
gtcatcagtaattatctcttggagaaatcccgtgtggtaaagcagaccaggggcgagagg
aatttccacgtcttctaccagctgctttctggagcatcagatgacttgctcaaaaaactg
aagctggaccgagacttcagcaaatacaactaccttagcttggattcggcaacagtcaat
ggattggacgatgctgccagtttcagaacagtcagaaatgccatgcaaattgtgggcttc
atggaggatgaggttcagtcaatacttgagctggtggccgccgttctcaagctaggaaat
atagagtttaaaccagagtctcgcgtcaacgggtttgatgagagtcgagtgaaggacaag
aacgacctcaaggagatgtgtgagctgctaggcattgaacagtctgtgctagagagagcg
ttcagctttcgtacggtggaggctaagatggagaaggtgtccaccacgctcaacgtggct
caggcctattatgcccgtgatgctcttgccaaaaacctctacagccgactgttcagctgg
ctggtaaaccgaatcaatgaaagcattaaggctcaaaccaagaaaccgaagaaagttatg
ggagtcctggatatttacggttttgaaatctttgaggacaacagttttgaacagttcatc
atcaactactgcaatgagaaactccagcaaatcttcatcgagcttactctccgcgaagag
caggaggagtatgtccgtgagggtattgagtggaccaacattgagtatttcaacaacgcc
atcatatgtgacctcatcgagaataacaagaatgggattttggccatgttggatgaggag
tgtttgaggccaggcacagtgacagatgagacattcctggacaagctgaacaccgtgtgc
gctgaacaccagcattttgagagcagacagagcaaaaactccaaattcctcacagaccac
agcctgccacacaactgcttccgcatccagcactatgctggaaaggtgttatatcgggcg
gagggatttgtggataaaaacaatgacctcctctacagagatttatcccaggccatgtac
aaagccaatcacagcctgatgaagcttctctttcctgagggaaatccagctaaagtgaac
cttaagcggccccccacagctggattccagttcaaagcctcagtgggaacgctcatgaag
aacctgctgaccaagaaccccaactatatcaggtgcatcaaacccaatgacaagaaagca
gcccacattttcacagactcactagtgtgtcaccaggtgcgctacttgggtctgatggag
aatgtacgcgtaagaagggctggttatgctttccgccaggcctatgagtcttgcctggag
cgctacaagatgctctgtaagcagacctggccccactggaggggcccagccagggagggt
gttaaggttctcctgacaggtctgcaggttcatgcagaggagtttgcctatggtcgctcg
aagatcttcatcaggaaccccagaacgcttttcttcttggaagaaaagagaaggcagtgc
ctagaggacttggcagcactcatccagaagatctaccgtggctggaagtgccgcactcac
tttctcctgatgaagaagagccaggtggtggtctccgcctggtaccgaagatttgcgcaa
caaaagaagtaccagaacatcaggtgctctgccttagtggttcagtcattcatccgtgga
tggaaggcccggaagcttctgcgtgaactgaaacacaagaagcggtgcgaacaggccgtc
acaactatttcagccttctggcatggaactcaggctcgctgggaactgcggcgtcttaag
gaagaggcacggaataaacacgccgtgtctgtcatttgggcagcttggcttggaactaag
gctcgaagagaactgcggcgcttaaagcatgaagcttgcagtaaacaggccgtgtctgtc
atttgggcctgctggcaaggaactaaggcacgtagagagctgaagcgcttgaaggaggaa
gccaggcgtaagcacgccatcgctgtcatttgggcctactggttgggactaaaggtccgt
cgggaatacagaaagttcttcagagctaatgctggcaagaagatctatgacttcaccatc
cagagaattatgcagaagtacttccttggcttgaagaagacgatgccttccatgtctccg
attgataagagctggccagctcggccctatggtttcctggacgagacacacaaggagctc
aggagggttttccatctgtggaggtgtaagaaataccgcagccagttcacagaagaaaag
aaggctacctatgaggagaagcttgcagctagtgaactcttcaaagataagaaggccttg
tatcctagcagtgtggggcagcctttcaaaggagactatgtggagataaccaaaaaccca
aagtaccagaagctaaacagcttggcagaggatagagttcttcttgcagatgtggtcagt
aaaatcaaccgtgccaatggcaagggagctccaagaatattcctcctgaccaagaagagt
ttggttcttgcggatcagaagacaggccaggtgaaggccagcgttcctctgctagacctc
agcagtgtgtctgtgagcacacagaacgatggctttttcgctcttaagctcaaagagggt
gctgtgtctgcagccaaaggtgacttcctgctgagcagcgaccgactgattgagattatc
accaaacttcatcgcaccggtgcagcttcagctgacaggaaccagatcaagatcgatatt
tcagatgagttcttagtgcagttcaaacaggacaaagtgtgtgtaaaattcatccagggt
acaccaaagaacggcaacagtgtcgcctgcaagcgtaaaaacaaccgccttctggaagtg
tccgttccgtcaccataa
DBGET
integrated database retrieval system
