Rhinichthys klamathensis goyatoka (western speckled dace): 130086124
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Entry
130086124 CDS
T09701
Symbol
colgalt1a
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg00310
Lysine degradation
rkg00514
Other types of O-glycan biosynthesis
rkg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
130086124 (colgalt1a)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
130086124 (colgalt1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rkg01003
]
130086124 (colgalt1a)
Enzymes [BR:
rkg01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
130086124 (colgalt1a)
Glycosyltransferases [BR:
rkg01003
]
O-Glycan biosynthesis
O-linked Gal type
130086124 (colgalt1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
CAP59_mtransfer
Motif
Other DBs
NCBI-GeneID:
130086124
NCBI-ProteinID:
XP_056108269
LinkDB
All DBs
Position
Unknown
AA seq
609 aa
AA seq
DB search
MLWFVLFVSVLWCSLMNTGPAQGYFHEERWSPESPILAPRVMIALICRNTQHSLPYFLGT
IERLNYPKDRIALWVATDHNIDNTTYLLRDWLVNVQKLYHYVEWRPKEEPREYHNEEGPK
EWTNERYAYVMKLRQAALESAREMWADYLMMIDCDNLLINRDVLWKLINENKTIVAPMME
SRAAYSNFWCGMSSQGYYKRTPAYIPMRKHVRRGCFAVPMVHSTFLVDLRKEASRTLAFH
PPHSDYTWAFDDIIVFSFSARMGEVQMFVCNKETYGYLPVPLRAHSTLQDEADSFIHTVL
EVNVRNPPVEPSRYLAKPVKNPDKMGFDEVFIINLKRRDDRRERMLRALREQEIDCKIIA
AVDGKAMNESEINAMGIHMLPGYSDPYHGRPLTRGELGCFLSHYNIWKEIVDRGLKTSLV
LEDDLRFEIFFKRRLQNLMSEVESKGLDWDLIYIGRKRMQVDRPEKAVPKIRNLVEADYS
YWTLGYMMSLQGAKKLLKAEPLRKMLPVDEFLPVMFNKHPVSDYMEQFETRDLKAFSAEP
LLVFPTHYTGEPGYISDTETSTVWDNERVRTDWDRKRSGKTREQAEISTEAQNSDVLQSP
LDRTARDEL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgctctggttcgtgttgttcgtgtcggtgctgtggtgcagtctgatgaacactggacca
gctcaaggatacttccacgaggagcgctggagcccggagtctcctatattagctccccga
gtaatgatcgctctcatctgcaggaacacacagcactctctgccgtatttcctcggaact
attgagcgcctcaattaccccaaagaccgaatagcgctctgggtagcaaccgaccacaat
attgacaacactacatacctactgcgagactggctcgtcaatgtacagaaactctaccat
tatgtggagtggaggccgaaggaggaaccaagagaatatcataatgaggaagggccaaag
gagtggacgaacgagcgctacgcctacgtcatgaagctgcggcaggcagcgctcgagtct
gcacgagagatgtgggctgactatctcatgatgattgattgtgataatcttctgatcaac
cgagacgtcttatggaaactaataaatgagaacaagacaatcgtggcaccaatgatggag
tctcgcgctgcctactcaaacttctggtgtggaatgtcatcccagggctactataagcga
actcctgcctacatccccatgcgtaagcacgtgcgtaggggttgctttgctgttcccatg
gtgcactcgactttcctggtggacctgcggaaagaagcttccagaacgctggcttttcac
ccgccacattcagactacacctgggcctttgatgacatcatagtcttctctttctcagcc
cgcatgggagaggttcaaatgtttgtttgtaacaaggaaacttacggatatctcccagtg
cctcttcgtgcccacagcactctgcaagacgaggccgacagctttattcatacagtgctg
gaggtcaatgtgagaaatcctccagttgagccctccagatacttggccaaacctgtcaaa
aaccctgacaaaatgggctttgatgaggtgtttataatcaacctgaagcgacgggacgac
cgccgtgagcgcatgctgagggctttgagagagcaagagatcgactgcaagattatcgct
gctgttgacggcaaagctatgaacgagagtgagatcaatgctatgggaatccacatgctt
cccggctacagtgacccgtaccacggcagacctctcacaagaggagagctgggctgcttc
ctgtcccactacaacatctggaaagagattgtagacagaggcctgaagacctcgctggtg
cttgaagatgatttgcggtttgagattttcttcaagcgacgcctgcagaatttaatgagt
gaggtcgagagtaagggtctggactgggacctcatttatattgggaggaagaggatgcaa
gtggaccggcctgaaaaagcagtaccgaaaattcgcaacctggtggaggcggactattcc
tactggaccttgggttacatgatgtcattgcaaggagccaaaaagctcctcaaagcagaa
ccactccgtaaaatgttgcctgtggatgaattccttcctgtaatgtttaataagcatcct
gtatcagattacatggagcagtttgagacgagggacctgaaagcgttctcagctgagccc
ttgcttgtgttccctacgcactacacgggcgaacctgggtacatcagtgacactgaaacc
tccacggtgtgggacaatgagagagtgcgcacagactgggacaggaagcgctcgggtaag
acccgggaacaggctgagatcagcacagaggcccaaaactcagatgtgctccagtctcct
ctggacaggacggcccgagatgaactatga
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