Rhinichthys klamathensis goyatoka (western speckled dace): 130086143
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Entry
130086143 CDS
T09701
Symbol
rorca
Name
(RefSeq) RAR-related orphan receptor C a
KO
K08533
RAR-related orphan receptor beta
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130086143 (rorca)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
rkg03310
]
130086143 (rorca)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
130086143 (rorca)
Nuclear receptors [BR:
rkg03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
130086143 (rorca)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
130086143
NCBI-ProteinID:
XP_056108294
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All DBs
Position
Unknown
AA seq
479 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAIYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQERAGVLSNGGPGHAGD
EAGENGISHGRAYSRGSSTTLSDLDDITTLPDGLLLDLPLTPEEAADYCSLELLGGSGGS
SSSSQSSPEPSRHEFSDVTHIKHEYQTLHESGLFTRSLLNPPEGCSLMEIERITQNVVKS
HIETSQYSSEELKRLAWTLYTHEEIRVYQNKSTEMLWQQCAVHITNAIQYVVEFAKRISG
FMDLCQNDQIILLKAGCLDVLLIRMCRAYNPINNTLLFDGKFTSPQLFKALGCDDLVSAV
FEMAKTLSRLQLSEEEMALFTATVLLSPDRPWLTDAQKVKKLQEKVYVALQHWLHKSGAN
EEKLSKMVSKLPMMKSISNLHIDKLEFFRLLHPETAYHFPALYREVFCSEITFPDSTEG
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcaaatcgaagtaatcccctgcaagatttgcggggacaagtcatcgggcatc
cactatggggtgatcacttgtgaaggctgcaagggcttcttccgccgaagtcagcagaac
aatgcgatatactcctgctcgaggcagaggaactgtcttattgaccgaaccaatcgcaac
cgttgccagcactgccgcctgcagaagtgtctggcactgggcatgagccgcgatgcggtg
aagtttggccgcatgtcgaaaaagcagcgcgacagcctctatgctgaggttcagaagcac
cagcagtcccaggagcgggcaggggttctgagcaatggtggacccggccacgctggtgat
gaggctggggagaacggcatcagccatggccgggcctacagccggggctccagcaccacc
cttagcgacctggatgacataaccacgctaccagacggtctcctgttggatctgccgctc
acaccggaggaagccgccgactactgcagcctagagctgctggggggaagcggtgggagc
agttcgtcctcccagagttctcctgagcccagcagacatgaatttagtgacgtgacacac
atcaaacacgagtaccagaccctgcacgagtcgggactcttcactcgctcattacttaac
ccacctgaaggctgttccttgatggaaattgaacggattacacagaatgtggtcaaatcc
cacatcgagacaagtcagtacagctcagaagaactgaagagattggcttggaccctctat
acacatgaggagatacgtgtctaccaaaacaagtccacagagatgttgtggcagcagtgt
gctgtgcacatcacgaacgccatccagtatgtggtggagtttgccaagcgtatctctgga
ttcatggacttgtgtcaaaatgaccagattatccttctgaaagcaggctgcttggacgtg
ctattgatccgaatgtgtcgggcctacaacccaatcaacaacacgctgttgttcgatgga
aagttcacaagcccgcagctctttaaagcgctcggctgtgatgatctggtgagtgctgtg
tttgagatggctaaaaccctgagccggctacagttgtctgaagaggagatggctctgttt
accgccactgtgcttctgtctccagaccgaccttggttgacagatgcccagaaggtgaag
aaacttcaggagaaggtctatgttgcgttgcaacactggcttcataaaagtggtgccaat
gaggagaaactgtcaaagatggtgtccaagttacccatgatgaagtccattagcaacctc
catattgataagctggagtttttccgcctccttcacccagaaacggcctaccacttccct
gctctctacagagaggttttctgcagcgagatcaccttcccagactccactgagggctaa
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