Rhinichthys klamathensis goyatoka (western speckled dace): 130086151
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Entry
130086151 CDS
T09701
Symbol
colgalt2b
Name
(RefSeq) procollagen galactosyltransferase 2
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg00310
Lysine degradation
rkg00514
Other types of O-glycan biosynthesis
rkg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
130086151 (colgalt2b)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
130086151 (colgalt2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rkg01003
]
130086151 (colgalt2b)
Enzymes [BR:
rkg01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
130086151 (colgalt2b)
Glycosyltransferases [BR:
rkg01003
]
O-Glycan biosynthesis
O-linked Gal type
130086151 (colgalt2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
130086151
NCBI-ProteinID:
XP_056108303
LinkDB
All DBs
Position
Unknown
AA seq
612 aa
AA seq
DB search
MPAEGFVIVAVICALMAQNCRGELVAHVQDLSVPESSLLKPKVMIAILARNSAHSLPYYL
GCIDRLDYPKDRIAIWAATDHNVDNTTAILREWLKNRQSRYHYVEWRPMDEPRSYTDEWG
PKHWAPSRFNHLMKLRQAALKTARERWADYILFVDSDNLLTNPRVLDLMMAENFTLVAPM
LDSRSLYSNFWCGITPQGYYKRTPDYQPIREWKRLGCFSVPMVHSTFLMDLRRSATLDMA
FYPPHPDYSWAFDDIMVFAFSARQTGVQMYVCNREHYGFLPVPLKAQQSVEDEKESFIHT
ITEAMIDHNIKPSEFLFTPPKPQDKMGFDEIFLINLKRRLDRRERMLNTMAVLGIEATLV
DAVDGKSLNTSQLQALGIEMIPEYKDPYSGRVLTRGEIGCFLSHHFTWIQVVERGLRHVL
VLEDDVRFEPRFKRRLQTIMEDVEKAQLNWDLIYVGRKRMQVAQPEVSVEGVNNLVKADY
SYWTLGYALSQQGAKKLLAAQPLGKMLPVDEFLPVMFNKHPNEAYMSHFDPRDLRAFSVE
PLLLYPTHYTGEPGYFSDTETSTIWDDEAVNTDWDRQYAQKTAQQAQIRSVAQNSVTGDT
PPPASRASRDEL
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagggattcgtgattgtagctgtgatttgcgctctgatggcgcaaaactgc
cgtggggaacttgtggctcacgtgcaggacctttccgtgcccgaatcctccctgcttaaa
cccaaagtcatgatcgcgattttggctcggaactcggcgcacagcctgccgtactacttg
ggctgcatcgaccgcctggactacccgaaggaccggattgcgatatgggctgcaacggac
cataatgtggacaacaccacagccatcctgagagaatggctgaagaacaggcagagcaga
tatcattacgtggagtggagacccatggatgagccacggtcatacacggatgagtggggg
ccgaaacactgggctccgtctcgtttcaatcatctaatgaagctcaggcaggcggcactg
aagactgcacgtgaacgatgggctgattatatcctgtttgttgacagtgataacctcctg
accaacccacgggtgctggatctcatgatggcagagaatttcacactggtggcgcctatg
ctggattcccggtccctctactcaaacttctggtgtggcatcacacctcagggttattac
aagcgcaccccagactaccagcctatccgtgagtggaagcgtttgggctgtttctcagtt
cccatggtgcactccaccttcctgatggatctgagacgtagcgccacgctggacatggcc
ttctacccacctcacccagactacagctgggcgtttgatgacatcatggtctttgcattc
tccgcgcgacaaactggtgtacagatgtacgtgtgtaacagagaacattacggttttctg
cctgtacctctgaaggcccagcaaagtgttgaagatgagaaggagagtttcatacacacc
atcactgaggccatgatcgatcataacataaaaccctccgagttcctcttcactccaccc
aaaccccaggacaagatgggctttgatgagatctttctgattaatctgaagcggaggttg
gaccggagggaacggatgttgaacacaatggcggtgctgggtattgaggctacgctggtt
gatgctgtagatgggaagtcactgaatacatctcagcttcaggctctaggtatagagatg
atcccggaatataaagatccgtactccggtagggttctgacacgcggagagattggctgc
ttcctcagccaccacttcacctggatacaggtggtggagaggggtctgcgacatgtgctg
gtgttggaggatgacgtgaggtttgagcctcggtttaagaggaggttacagaccatcatg
gaggatgttgaaaaagctcagctgaactgggacctcatatatgtgggccgtaagcggatg
caagtagctcagccggaggtgtctgtagagggtgtgaataacttggtgaaggccgattac
tcatactggactctaggttacgctctttcacagcagggggccaagaaactcctcgctgct
cagccacttggcaagatgctccctgtagacgagttcctgccagtcatgttcaacaaacac
cctaatgaggcatacatgtctcactttgatcccagggatcttcgtgctttctctgttgag
ccattgctgttgtacccaacacactatacgggcgagccgggttacttcagcgacactgag
acgtccactatttgggatgacgaggctgtcaacacagactgggacagacagtatgcccaa
aaaactgcccagcaggcacaaattcgctccgtcgcccagaacagtgtcaccggggacaca
ccaccgcctgcgtcccgagcctcgcgagacgaactctga
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