Rhinichthys klamathensis goyatoka (western speckled dace): 130086216
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Entry
130086216 CDS
T09701
Name
(RefSeq) E3 ubiquitin-protein ligase DTX3L-like
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
130086216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130086216
Enzymes [BR:
rkg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130086216
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130086216
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DTC
KH_DTX3L
zf-RING_4
DZR
zf-Tbcl_FmdE
Motif
Other DBs
NCBI-GeneID:
130086216
NCBI-ProteinID:
XP_056108395
LinkDB
All DBs
Position
Unknown
AA seq
735 aa
AA seq
DB search
MEQAVEPMDIDEYDLYTAGAEGQDSGTTLNDMMHLNFTMDRTHNSDSLSEKDIYTAGYER
PQPSAPLDVAKFIIKVDWREPFPERWRATLQKALQSCFLKMEGKTDVVSLKLMDDPSCAE
VQITPSRALEVLKRLNRISLRFKDYKDGTFKEATAWIGLDEAHFVKDNGAPSTKVIGSMP
VTAASEYTNDVDDVSASNRASNKAESSKTAITTPDTPAVLTVPLYEFWYMHHAYRRELEQ
FEKQHGVSICAEVSVSIKHIQRSSPDSVPKTTDDFEKLVQECVGSFSHAAINHNHMNSDI
VKHALRFIQSEEAKMMFTMSASDCLFFGPKKYTDVIKRDEEGTRMESQFNDKSSQMNKEN
RSLFNMDTKDLPTHLEMDTVHWDLMKLSYKEQLSQLETKYGVSFNEEKQQKNVTIKVQAQ
SKGVQHINLESHAIRALTQLYQKLGSAAVTCELKNPTDATLVASEVEKLQQEHHCVVAED
ALSRWRLVGLPEHLGPAIAEIEKMLQKSVFDDKKKKSIGYSEDVPHARGIQWNQMPDYGE
GAVGGSVREEGMNFKGRSEADKGFIDDLKKKSRKYEFCRDCGSKKSMGSICPVCKEVYGK
LEGNQPIGKMKATKTGMSLPGYPGCGTIEIYYDIPDGVQTKQHPNPGKPFYGSNLHAYLP
DNPEGKEVLSLLHRAFKQKLIFTVGRSTTTGADNVVTCNDIHHKTNISGGPESNGYPDPG
YLKRVKDELKAKGIK
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggaacaggcagttgaaccaatggacattgacgaatatgacttatatactgcaggagct
gaaggtcaagactctggaacaactttgaatgacatgatgcatctaaacttcacaatggat
cgaacacacaattcagactcactgtcagaaaaggacatttatacagctggctatgaaagg
ccacaaccttcagcaccactggatgttgctaaatttataatcaaagtggactggagagaa
ccatttccagagagatggagagcaacattacagaaagcccttcagagctgcttcctcaaa
atggaaggaaaaactgatgtcgtcagccttaaactcatggatgatccgtcctgtgcagag
gtgcagataacaccatcaagagctctagaagtgttaaaaaggctcaaccgtatatctttg
aggtttaaagattataaggatggtacatttaaggaagcgactgcatggattggtctggat
gaagcacattttgtaaaggacaacggagcgccttcaacaaaggtgatcggttctatgccc
gtgactgcagcatcagaatacacaaatgatgttgatgacgtgtctgcatctaatagagct
tcaaataaagctgagtccagtaaaactgcgataacgacccctgatacaccagctgtactg
actgtccccctttatgagttctggtacatgcatcacgcttacagaagggagttagaacaa
tttgagaaacagcatggagtctctatttgtgcagaagtgtcagtctcaatcaaacatatc
cagagatcaagccctgattctgtgcctaaaaccactgatgactttgagaaacttgttcag
gaatgtgttggtagttttagtcatgctgccattaatcataatcacatgaattcagatatt
gtgaagcacgcccttcgtttcatccagtcagaggaggcaaagatgatgttcaccatgtct
gccagtgactgcctgttctttggaccgaagaaatatacagacgtgattaaaagagacgaa
gaaggaacaagaatggaaagccaattcaatgacaaatcaagtcaaatgaataaagaaaac
aggtctttatttaacatggacacaaaggatcttccaactcatctagagatggacacggtt
cattgggatctgatgaaactttcctataaggagcaattatcacagcttgaaacaaagtac
ggagtgtcatttaatgaagaaaaacagcagaaaaatgtaaccattaaggttcaagctcaa
tccaaaggagttcaacatattaatcttgaaagtcatgccatcagagctttaacacaactc
taccagaaacttggatcggccgctgtcacctgtgaactcaaaaaccctacagacgcaact
cttgtggcatcagaagtagagaaacttcagcaggagcatcattgtgttgttgcagaagat
gcattgagtcgctggaggctcgttggactgccagaacatctcggtcctgccattgctgaa
attgagaagatgcttcagaagagtgtgtttgatgacaagaagaagaaatcgattggttac
tcggaggacgttcctcatgcaagaggaatccaatggaatcagatgcctgattatggggaa
ggagcagtgggaggatcagtacgggaagaggggatgaattttaaagggcggagtgaagct
gataagggtttcattgatgatctaaaaaaaaaatctagaaaatatgaattctgtcgagat
tgtgggtcaaagaagagtatgggatccatctgtcctgtgtgtaaggaagtgtatgggaaa
ttggagggaaaccaaccaattggaaaaatgaaagcaacaaagaccggaatgagtcttcct
ggatatccaggttgtggcactattgaaatctactatgacatacctgatggtgttcaaacg
aagcagcatccaaacccaggaaagcctttttatgggtcaaatcttcatgcgtacttgcca
gacaatcctgaaggaaaagaagtgctctcactgctgcatagggcttttaaacagaaactg
atctttactgtcgggagatctacaactacaggtgcagataatgtggtcacctgtaatgat
attcatcataagaccaacatatccggtgggcctgaaagtaatggctatccagatcctggc
tacctgaagagagttaaagatgagttaaaggccaaaggcattaaatga
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