Rhinichthys klamathensis goyatoka (western speckled dace): 130086248
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Entry
130086248 CDS
T09701
Symbol
lima1b
Name
(RefSeq) LIM domain and actin-binding protein 1
KO
K23026
LIM domain and actin-binding protein 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rkg04812
]
130086248 (lima1b)
Cytoskeleton proteins [BR:
rkg04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
130086248 (lima1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
130086248
NCBI-ProteinID:
XP_056108437
LinkDB
All DBs
Position
Unknown
AA seq
767 aa
AA seq
DB search
MDAGPFSKRQWATQSLRITAKELSLVGGRGKNNAITERLSKYQKAAEEASADKKKSSVDS
LSVRSGNLSVLKKRWERPAPEKSALQLSVAPSVSRKPSIRPEPPASSSKPVRQPSLSQEP
TSHERPAQTKADMETKQKKRVEEKEENESASDPFSPSSPLEKPVLPLNNRKMMFEKGKSK
EQTEVNSTSEDMDTQMANKGTSSLKRSASVRDRMAKYQLAVNRQAPVTVPRSAKQSESED
SVPVVDHKEISPPAGDGQTVKTLPPSNCAKTNGEHVHTASTAHPASESKDPPKVLRKFNP
PVQERCVCCQQTVYPVEKLIANQQIYHKTCFRCAFCNTKLSLLSYASLHGSIYCKPHFSQ
LFKSKGNYDEGFGHRPHKEMWTPRTNDEGPEGSENSKPSVAEPVKPTVQPKPKAEESRPA
KYTDVTAAQETRSHVTSSTEKPHTTSVETRKLRVAWPPPADSDGSAKVSSPVAEGGKSPT
KLFRAKWPPEEEAPPAQKSSERAELRSLRRSSSLRERSRPFSVAPSLTLTNNPQQEVPSV
RRGSLEELRSLSKAKTDKTEVKIPDKEAKIPDKEAKIPDREAKIPDREAKIPDREAKIPD
KKTKDTDSQFKEDAESPVKMESKEKMPSSILKVTQPTKKEAGPKQTNEESQPKQTKKEPE
EIQPKQTDLQQRNKESQPKVTKTEPELQQQRGSKAREEKLMKTSKTFPELQDTSAPPVEE
KAHRKSQDVGFWDGEEAEEALTVEEMIKRNRYYEDEDDDDEEEVAIV
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggatgcggggccatttagcaagagacagtgggcgacacagtccttacggatcacagcc
aaagagctctcactggttgggggtcgtggcaagaacaatgccatcactgagcgcctttcc
aaatatcagaaagccgccgaggaggcgagcgcagacaagaaaaaatcgtctgttgacagt
ttgtccgtgcgatcgggaaacctgagtgtgctgaagaaacgctgggaacgaccggctccg
gagaaatctgctcttcagctgagcgtggctccttctgtttcccgcaaacccagcattcga
ccagaaccacctgcttcctccagcaaacccgtgcgacagcccagcctgagccaggagccg
acgtcccatgagagacctgcccaaacaaaggcagacatggagactaaacaaaagaagagg
gtagaagagaaggaagaaaacgagtctgcatccgatccattttctccatcttcccctttg
gagaaaccagtcttgcctctcaataaccgcaaaatgatgtttgaaaagggcaaaagcaag
gagcaaacagaagtgaacagcacctcagaggacatggacacacaaatggccaacaaaggt
acttccagtctgaagcgcagcgcctctgtcagggaccgcatggcgaaatatcagctagcg
gtcaacagacaggctcctgttactgtgccacgctctgcaaagcagtcggaaagcgaggac
agcgttcccgtcgtggatcataaggagatctcgcctcctgctggtgatggacagacagtg
aaaacactccctccatcaaattgtgcgaagaccaatggagagcatgtacacacagcgagc
actgcacaccctgcgtcagagagcaaggaccctcctaaagtgctcaggaaatttaatcca
cctgtccaggaaagatgtgtgtgctgccagcagacggtttatccggtggaaaaacttatt
gccaaccagcagatttaccataagacttgcttccgctgtgccttctgtaataccaaactc
agcttgctgtcttacgcttccctgcatggcagcatctactgcaaacctcacttcagtcag
cttttcaagtctaagggcaactatgatgagggctttggccaccgaccgcataaggaaatg
tggacaccacgaacaaacgacgagggacccgaggggagtgaaaactcaaagccctccgtg
gcagagcctgtgaagcctacagtacaaccaaagcccaaagcggaggagtcacgaccagcc
aaatacactgacgtgactgcagctcaagagaccaggagtcatgtgaccagctccacggaa
aaaccacacaccacctctgtggaaaccagaaaactgagagtcgcgtggccacctcctgca
gacagtgatggaagcgccaaagtctccagtccagtcgctgaaggcgggaagagcccaacc
aagcttttccgagcaaagtggcctccggaggaagaagctccacctgctcagaagagctca
gaaagagccgaactgagaagcctgaggcgaagctcgtctctcagagagcgcagccggccc
ttttctgtggctccaagcctgacattaaccaataatccacagcaagaggttccttcagtc
agacgaggctcgctggaggagcttcgctcgctgtcaaaggcgaaaacagacaaaactgaa
gtcaaaatcccagataaagaggcgaaaatcccagacaaagaggcgaaaatcccagataga
gaggcgaaaatcccagatagagaggcgaaaatcccagatagagaggcgaaaatcccagat
aaaaagacaaaggacactgacagccaattcaaagaggatgcggagagtcctgtcaagatg
gagagtaaggagaagatgccctcttccattctcaaagtgacacaaccaaccaaaaaagag
gctggtcccaaacaaacaaatgaggagtctcagccaaaacaaacaaaaaaagagccagag
gaaattcagccaaaacaaactgatctacaacaaagaaataaggagtctcagccaaaagta
acaaaaacagagcccgagctacaacagcagaggggttcgaaagctcgtgaggagaaactg
atgaaaacctccaagacttttcctgagctccaggacacatccgctccacccgtggaagaa
aaagcccatcggaagtcccaggacgtgggcttctgggacggggaggaggccgaggaggcc
ctgaccgtggaggaaatgatcaagaggaatcgctactatgaagatgaagatgatgacgat
gaggaggaagtggcaatagtttga
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