Rhinichthys klamathensis goyatoka (western speckled dace): 130086564
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Entry
130086564 CDS
T09701
Symbol
dnmt1
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1 isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg00270
Cysteine and methionine metabolism
rkg01100
Metabolic pathways
Module
rkg_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
130086564 (dnmt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130086564 (dnmt1)
03032 DNA replication proteins [BR:
rkg03032
]
130086564 (dnmt1)
03036 Chromosome and associated proteins [BR:
rkg03036
]
130086564 (dnmt1)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
rkg02048
]
130086564 (dnmt1)
Enzymes [BR:
rkg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
130086564 (dnmt1)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
130086564 (dnmt1)
DNA replication proteins [BR:
rkg03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
130086564 (dnmt1)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
130086564 (dnmt1)
Prokaryotic defense system [BR:
rkg02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
130086564 (dnmt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAH
DNA_methylase
DNMT1-RFD
zf-CXXC
DMAP_binding
Motif
Other DBs
NCBI-GeneID:
130086564
NCBI-ProteinID:
XP_056108603
LinkDB
All DBs
Position
Unknown
AA seq
1504 aa
AA seq
DB search
MPTRTSLSLPEDVKERLQVLDEGGDSLSDEECVKEKLRLLQEFLLSDTQDQLKILEDKLK
SSELSTEVYTSEVKAILKKALGVGRVDGVEQNGHSNGFSENGSHKDDGEQEGAMDTRDEG
DAIKSPSAPKGRGGRRSKADSETKKSPGSSRVTRNSGKQPTILSMFSRVPKRKSDELNGE
AANGDAEVKTEEDITEEVHEEKRLKTEAEKPETENATNGNIKPVSTAKTPPPKCHDCRQF
LDDSDLKFFQGDPDNALDEPEMLTDERLSLFDANEDGFESYEDLPQHKITNFSVYDKHGH
LCPFDSGLIEKNVELYFSCAVKPIYDDNPCMDGGVPAKKLGPVNAWWITGFDGGEKALIG
FTTAFADYILMDPSEEYSLIFALMQEKIYMSKIVVEFLQKNQDATYEDLLNKIETTVPPA
GLNFNRFTEDTLLRHAQFVVEQVESYDEAGDSDEQPIIVTPCMRDLIKLAGVTLGKSRQL
YWRAARRQAIRHPTKIEKDNKGPTKATTTKLVNLIFDTFFSDQIDQNNKDGGVKRQRCGV
CEVCQAPDCGKCSACKDMIKFGGSGRSKQACQKRRCPNLAVKEAEDDENIEEEDVLPVKE
RKKMSQAKKKKQTKNKISWVGEPIKTEGKKEYYMKVRVENEVVEVGDCVSVSPDDPSHPI
YLARITALWDDGEKMFHAHWFCRGTDTVLGESSDPLELFLVDECEDMQLSFVHGKVNVLY
KAPSENWFMEGGMDDEIKVIEDDGESFFYQLWYEGECARFETPPNVTPLEDCKYKFCASC
TRIKERMAQDAPHAYEPLEDEERDSKAFYGLASLKGEQYRVGDSVYLPPEAFNFVVKVAS
PVKRSHRKEDVDEDLYPEYYRKSSDYIKGSNLDAPEPFRVGRIKEIFCSKRSNGKPDTSE
IKLRLYKFYRPENTHKGPKGAYHSDINKLYWSDEEVTVNMADVLGRCRVEYAEDLVESVQ
DYSSRGPDRFYFLEAYNARTKSFEDPPNHARSAVHKGKGKGKGKGKGKGKAASQESPDQE
PQEPTFPKLRTLDVFSGCGGLSEGFHQAGISETNWAIEMWDPAAQAFRLNNPGTTVFTED
CNVLLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVS
YLSYCDYYRPKFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTR
RRAIILAAAPGEKLPRYPEPLHVFAPRACSLSVAVDEKKYVSNVTRGNGGVYRTITVRDT
MSDLPEIRNGAAALEISYNGEPQSWFQRHIRGSQYQPILRDHICKDMSALVAARMRHIPL
APGSDWRDLPNIEVRLRDGTTTKKLRYSHSDKKNGRSGTGALRGVCSCAEGKPCDPADRQ
FNTLVPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVR
ECARSQGFPDTYRFFGNVLDKHRQVGNAVPPPLSKAIGLEIKRCVQERIKENATEPVKKE
KMEV
NT seq
4515 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccaggacctcactgtctctgccagaggatgtcaaggaacggcttcaggtgctg
gatgaaggtggtgacagtttgtcagatgaggagtgtgtaaaggaaaagctcaggttactg
caggagttcctgctctctgatactcaggaccagctcaaaatccttgaggacaagttaaag
agctccgagctttccactgaggtttacacatcggaggtgaaggccatactgaagaaagct
ctgggagttggcagggtggatggagtggagcagaatggacactcaaacggcttctctgaa
aacggatctcacaaagacgatggcgagcaggaaggagccatggatactcgggatgaagga
gatgctataaagtctcccagcgccccaaagggaaggggtggccgtcgcagtaaagcagac
tctgagaccaagaaatctccaggcagtagcagggttacacgcaactccgggaaacagcca
actatcctgtcaatgttctctagagtcccaaaacgcaagtctgatgagttgaatggagaa
gcagcaaatggtgatgcagaagttaagaccgaggaagatattacagaggaggtccatgaa
gagaaacgccttaaaacggaagctgagaagcctgagactgagaacgccactaatggcaac
atcaagcctgtgtccacagccaagacacctccgccgaaatgtcacgactgcaggcaattt
ctggatgattcagacctcaagttcttccagggagatcctgataatgctttggatgaaccg
gagatgttgaccgatgagcgtctttccctctttgatgcaaatgaggatggttttgaaagc
tatgaagatctgcctcagcacaagattactaacttcagtgtgtatgacaagcatgggcac
ctgtgtccgtttgactctggcctcattgagaaaaatgtggaactgtacttcagttgtgct
gttaagccgatctatgatgacaacccatgcatggatggtggggttcctgctaagaagctt
ggtcccgtcaatgcttggtggatcactggttttgatggtggagagaaggctttaattggc
ttcacaacagcctttgctgactacatcctaatggaccccagtgaagagtactcgctcatt
tttgctctgatgcaggagaagatctacatgagcaagattgtggttgaatttctccagaag
aaccaggacgccacatatgaggatctgcttaacaaaattgagactactgttccgcctgct
gggctcaacttcaaccgtttcactgaggacacactgctgcgccatgcccagtttgtggtg
gagcaggtggagagctatgatgaggctggagactcagacgagcagcccatcatcgtcact
ccctgtatgcgagacttgatcaagctggctggtgttactttgggaaagagcaggcagctg
tactggagagcagccagaagacaagccattcgtcatcccaccaagattgagaaggacaac
aagggcccgactaaagccaccaccactaaactggtcaacctaatctttgacacctttttc
tccgatcagattgaccagaacaataaggatgggggagtgaagagacagcggtgtggtgtc
tgtgaggtgtgtcaagcaccagattgtggcaagtgttcagcctgtaaggatatgatcaag
tttggcggcagtggcagaagtaaacaggcctgtcagaagaggagatgtcccaacctggca
gtgaaagaagcagaggatgatgagaatattgaagaggaggatgtgttgccggtaaaagag
agaaagaaaatgtctcaggccaagaaaaagaaacagacaaagaataagatcagctgggtg
ggagagcccatcaagactgagggaaagaaggaatactacatgaaagtgcgcgttgagaat
gaggtggttgaggttggagattgtgtgtctgtcagccctgatgacccatcacaccccatc
tacttggcaaggattacagcattgtgggatgacggtgagaagatgtttcatgcccactgg
ttctgccgtggcaccgatactgtgcttggagagtcatcagaccctcttgagctctttctt
gtggatgagtgtgaagacatgcagctgagttttgtccatggcaaggtcaacgtcctctac
aaggctccatctgaaaactggttcatggagggtggcatggatgatgaaatcaaagtcatc
gaggacgatggcgaaagcttcttttatcagctctggtacgaaggggaatgtgctcgcttt
gagacgcctcccaatgtcacaccattggaggactgcaagtataagttctgtgccagctgc
accaggattaaggaacgaatggctcaggatgcgcctcatgcctatgagcccctggaggat
gaggagagggactctaaagccttctatgggttggctagcctgaagggagagcagtacaga
gtaggagacagcgtctatctacccccagaggcttttaattttgtggtaaaggttgcaagc
ccagtgaagcgttctcacagaaaggaggatgtcgatgaggatctttacccagaatactat
aggaagtcctctgattacataaagggctcaaaccttgatgctccagagcccttccgcgtt
ggccgcatcaaagaaatcttttgcagcaagcgcagcaatggaaagccggacacaagcgag
atcaaactgcgcctctataaattctacaggcctgaaaacactcataaaggaccaaagggt
gcctaccactctgacataaacaagctctactggagtgatgaagaggtgaccgtgaacatg
gcggatgtgctgggccgctgccgtgtggagtatgcagaggatcttgtggaaagtgtgcag
gactattcaagtagaggacctgatcgcttttatttcctagaggcttataatgccaggact
aagagctttgaggatcctcccaatcatgcccgatcagccgtgcataagggcaaagggaaa
ggaaaggggaaagggaaagggaaaggtaaagcagcctcacaggaatcaccggatcaggag
ccgcaagagccgacattccccaaactgcgcacactggatgtgttctctggctgtggtggt
ctgtctgagggtttccatcaagcaggaatctccgagactaattgggccatcgagatgtgg
gatcctgccgctcaggccttcaggttgaacaatcctggcaccacagttttcacagaggac
tgtaatgtccttttgaagctggtgatgtctggagagaagaccaactctcttggacagaag
ctgcctcagaagggtgacgtggagatgctctgtggtgggccgccctgccaagggttcagt
ggaatgaaccgcttcaactcgcgcacgtactcaaagttcaagaactctctggttgtctct
tatctgagttactgtgactattacagaccaaagttcttcctgctggagaatgtgaggaac
tttgtgtccttcaagcgctccatggtcctgaaactcacgctgcgctgtctggttcgcatg
ggataccagtgcacctttggtgtgctacaggctgggcagtatggggtggcccagacccgg
cgcagggcgatcatcctggctgcagccccgggtgaaaagctgccccgttaccctgaaccc
ctgcatgtgtttgccccacgagcgtgttctcttagtgtggcggttgacgaaaagaaatac
gtcagcaatgtgactcgtggaaatgggggtgtttaccgcaccatcacagtgcgggacacc
atgtctgacctccctgagatccgtaacggagccgctgctctggagatctcctacaatggt
gagccgcagtcctggttccagagacacattcgtggctctcagtaccagcccatcctccgg
gaccacatctgtaaggacatgagcgccctggtcgccgcccgcatgcgccacattcctttg
gctcctggttctgactggagggatctgcctaatattgaggtgcggctgcgggacggcacc
accacaaagaagcttcgctacagccactccgacaaaaagaatggccgcagtggcaccggt
gctttaagaggagtgtgttcctgtgctgagggaaaaccatgtgaccctgcagacaggcag
ttcaacacattggttccctggtgtctgcctcacacgggtaaccggcacaatcactgggct
ggtctgtacggccgtctggaatgggacgggttcttcagcactacggtgaccaatcctgag
cccatgggaaagcagggacgcgtcctgcaccctgagcagcaccgtgtggtcagtgtcagg
gaatgtgcacgctcccagggcttcccagacacctatcgcttcttcggcaacgtcctagac
aaacacagacaggttggtaatgctgtgcctccacccctctccaaagccattggcctggag
atcaagagatgtgtgcaggagagaataaaggagaacgctacagagcctgtaaaaaaggag
aagatggaggtttga
DBGET
integrated database retrieval system
