Rhinichthys klamathensis goyatoka (western speckled dace): 130086615
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Entry
130086615 CDS
T09701
Symbol
abcb11b
Name
(RefSeq) bile salt export pump isoform X1
KO
K05664
ATP-binding cassette, subfamily B (MDR/TAP), member 11
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
130086615 (abcb11b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rkg02000
]
130086615 (abcb11b)
04147 Exosome [BR:
rkg04147
]
130086615 (abcb11b)
Transporters [BR:
rkg02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB11 subgroup
130086615 (abcb11b)
Exosome [BR:
rkg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130086615 (abcb11b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_22
ABC_ATPase
AAA_29
AAA_30
AAA_15
AAA_16
AAA_21
Zeta_toxin
Rad17
AAA_7
P-loop_TraG
AAA_23
Motif
Other DBs
NCBI-GeneID:
130086615
NCBI-ProteinID:
XP_056108677
LinkDB
All DBs
Position
Unknown
AA seq
1346 aa
AA seq
DB search
MPGTVKLRSIKKFAQENDGYEFSDEATNGDYMTMGKDKKSKDGKKEESAIRVGFFQLFRF
ASCREIWMMICGSLCAIAHGSAQPLMLLVFGMLTDTFIEYDIELNELTDPEKVCVNNTIQ
WRNLTQEENLALNMTRSCGLLDIEYEMTNFAYYYVGIGAGVFILGYLQISLWITAAARQI
QIIRQMYFRKVMRMEIGWFDCTSVGELNTRMSDDINKINDAIADQVGIFIQRFTTFVCGF
LMGFAKGWKLTLVIVSVSPLIGLGAGLMALFVAKLTGMELQAYAKAGAVADEVLSSVRTV
AAFGGEKKEVDRYDRNLISAQRWGIRKGLIMGFFTGYLWFIIFLCYALAFWYGSSLVVDT
QEYSPGTLLQVFFGVLIAALNLGQASPCLEAFAAGRGAATIIFETIDREPEIDCLSEAGY
KLDKVKGDLEFHNVTFHYPSRPEVKILNQLNLQVKSGETTAFVGPSGAGKSTAIQLIQRF
YDPKEGMVMLDGHDIRGLNIQWLRSLIGIVEQEPVLFATTIAENIRYGRPGVSNDDIITA
AKEANAYNFIMDLPQKFDTSVGEGGGQMSGGQKQRIAIARALVRNPRILLLDMATSALDN
ESEAVVQEALDKVRLGRTTISIAHRLSTIKNADVIVGFEHGRAVERGKHEELLDRKGVYF
TLVTLQSQGDKALNQKAQQEMEEAESIDPDAERKSLIRAGSYRASLRASIHQRSRSQLSN
VVPESSVAIAGELGPRSYSETCVPQEFMGKSSLLEEEIEVVEPAPVARILKYNAPEWPYM
LFGSFGAAVNGGVNPVYSLLFSQILATFSMPDPVEQRREINGICLFFVFVGLVSFFTQVL
QGYAFSKSGELLTRRLRRLGFHAMLGQEIGWFDDRRNSPGALTTRLATDASQVQGATGSQ
IGMIVNSLTNIGVAIIISFYFSWKLTMVILCFLPFLALSGGFQAKMLTGFAKQDKEAMET
AGRISGEALNNIRTIAGLGKERSFVEMFDTQLEGPYQAALKKANVYGACYGFSQCVVFMA
NSASYRFGGYLVYQEGLHFSMVFRVISAIVTSGTALGRASSYTPDYAKAKISAARFFKLL
DHIPKISTYSNEGEKWDNFKGDIEFIDCKFTYPSRPDIQVLNGLNVSVKPGQTLAFVGSS
GCGKSTSVQLLERFYDPNNGRVLIDGHDSTRVNVAFLRSKIGIVSQEPILFDCSIAENIR
YGDNERQLSMDDVISAAKKAQLHDFVMSLPEKYDTNVGSQGSQLSRGQKQRIAIARAIIR
DPKILLLDEATSALDTESEKTVQEALDKAREGRTCIVIAHRLSTIQNSDIIAVMSRGYVI
EKGAHDYLMGLKGAYYKLVTTGAPIS
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atgccaggaaccgtaaagctgcgcagcatcaagaagtttgcacaggaaaatgatggttat
gaattttcagatgaggcgacaaatggtgattacatgacaatgggaaaggataaaaagtcc
aaagatggcaagaaagaagaatcggccatccgcgttggcttctttcagctgtttcgcttt
gccagctgccgggagatctggatgatgatttgtgggagcttgtgtgcgattgctcacggt
tcagcgcagccgctgatgctgctcgtgtttgggatgctgacggacaccttcatagagtat
gacatcgagctcaatgagcttactgacccggagaaagtatgtgtgaacaacactatacag
tggcgaaacctgacacaagaagaaaacctggcactgaacatgaccagatcatgcgggcta
ttagacattgaatatgaaatgaccaatttcgcctactattatgtaggcatcggagcgggg
gtcttcattcttggatacctgcaaatctctctgtggatcactgcagcagcacgacagatt
cagatcatcaggcagatgtatttcaggaaggtcatgaggatggagattggttggtttgac
tgcacctctgtgggagagctcaacacacgcatgtctgatgacatcaacaagataaacgat
gccattgctgatcaggtggggatcttcatccagcgcttcaccacattcgtgtgtggtttc
ctcatgggtttcgcaaagggctggaaactaacgctggtcatcgtctcagtgtctcctctg
attgggctcggagcaggtctcatggctctgtttgtggcaaaactgacgggaatggagctg
caggcgtacgctaaagcaggtgctgtggcagatgaggttttgtcttctgttcgcactgtg
gcagcattcggtggtgagaaaaaagaagtggacaggtatgaccgtaatctgatctctgcc
cagcgatggggcatccggaaagggctgatcatggggtttttcacagggtacttgtggttc
atcatcttcctgtgttacgcactagctttctggtatgggtccagtttagtggtggacaca
caagagtacagtccagggactttactacaggtatttttcggagtgcttattgctgcgctg
aatttgggccaggcgtctccttgtctggaggcttttgctgctggaagaggagccgccacc
attatctttgagaccatagaccgcgaaccagagatcgattgtctctctgaggctggatat
aagttagacaaagtgaaaggagatctggagtttcacaatgtaacttttcattacccatct
cgaccggaagtgaagatcctcaatcagcttaatctgcaggttaagtcaggagagacaaca
gcgtttgtgggtcccagtggtgctggaaagagcaccgcgatccagctcattcaacggttc
tatgaccccaaagaagggatggttatgttggatggtcatgacatcaggggcctgaacatc
cagtggctgcgttctctgattggaattgtggagcaggagccggttctgtttgcgaccacc
attgctgagaacattcgatatgggcgtcctggagtctcgaacgacgacatcatcacagca
gccaaagaggccaatgcctataacttcatcatggatttaccacagaaatttgacacttcg
gtaggtgagggtggtggccagatgagtggcgggcagaaacagagaatcgcaatagcccgg
gcacttgtgaggaatcccagaatcctcctgcttgacatggccacatcagctctggacaat
gagagtgaagctgtcgtacaggaggctttggacaaggtacgattgggtcgcaccaccatc
tccatcgctcaccgtttatccacaataaagaatgcagatgtgatcgtgggattcgagcat
ggccgtgccgtggaacgaggaaaacacgaggagctgctggatagaaagggcgtctacttc
accttggtcactcttcagagccagggagacaaagccctcaatcaaaaagcccaacaggag
atggaggaagctgaaagtattgatcctgatgcagagagaaagagtctcatcagggcagga
agctatcgagctagtttgagggcttctattcaccaaagatctcgatcacaactgtcgaat
gttgtacccgaatcctcagtggccatcgctggagagctaggccctcgctcatactctgaa
acctgcgttcctcaggagttcatgggaaagagcagccttcttgaggaagaaatagaggtg
gtggaaccagctccagtggctcgtattctgaaatataacgctcccgaatggccctacatg
ctctttggaagctttggagctgctgtgaatggaggggtgaacccagtctactctctcctc
ttcagccaaatcctggcgacattctcaatgcctgatcctgttgaacaacggagggaaatt
aatggcatctgtctgttctttgtatttgttggtttggtttcgtttttcacacaagtgtta
cagggctacgcattctctaaatctggggaactgctgacacgtagactgaggcgtctgggt
tttcatgcaatgctggggcaggagattggctggtttgatgaccgcagaaacagcccaggt
gctttaacaacaagactggctactgatgcctcacaagtccagggagccacaggttctcag
atcggcatgatcgtgaattctctgaccaacatcggtgtggccattatcatctccttctac
tttagctggaagctcactatggttatcctgtgctttctgcccttcctggctctctctgga
gggtttcaggctaagatgctaaccggattcgccaagcaggacaaagaggccatggagaca
gcaggacggatatctggagaagctctgaataacatccgcaccattgccggcctaggaaaa
gagcgcagttttgtggagatgttcgacacgcagctggagggcccgtaccaggccgcgctg
aagaaggctaatgtttacggtgcctgctatgggttttcccagtgtgtggtcttcatggcg
aactccgcctcctatcgattcggtggatacctggtctatcaagaggggctacacttcagt
atggttttcagggtgatttcagcgattgtaaccagcggcacagctctcggtcgagcgtcc
tcttacactccagactacgccaaagccaagatctctgccgcgcgattcttcaagctactc
gaccacattcccaaaattagcacctacagcaatgaaggagaaaaatgggataattttaaa
ggggatattgagtttatagactgcaagttcacatacccgtcccggccagatattcaggtt
ctgaatggtctgaatgtgagtgttaagccgggacagactttagcctttgtgggcagcagc
ggctgtggcaagagcactagcgttcaactattggagagattctacgatcctaacaatgga
cgtgtgctcattgatggccatgactctactcgggtcaacgttgctttcctgcgctctaag
attgggatcgtctctcaggagccaattttgtttgactgcagtattgcagaaaacatccgc
tatggagacaacgaacgacagctcagcatggatgatgtcatctccgcagccaagaaagcc
cagctgcacgactttgtcatgtcacttcctgagaaatacgacactaatgttggttcccaa
ggttcccagctgtcccggggtcaaaagcaacgcattgctatagccagggcgatcatacga
gaccccaaaatacttctactggatgaggccacctcagcactggatacagaaagtgagaag
actgtacaggaggctttggataaagcaagagaaggcagaacttgtatcgtcattgctcac
cgtctgtccactatccagaactctgacatcatagctgtgatgtctagaggatatgttatc
gaaaagggcgcacacgactatctcatgggcctgaagggggcgtactacaaactcgtcacg
accggagctccaatcagctaa
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integrated database retrieval system
