Rhinichthys klamathensis goyatoka (western speckled dace): 130086627
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Entry
130086627 CDS
T09701
Symbol
rbb4l
Name
(RefSeq) histone-binding protein RBBP7 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03082
ATP-dependent chromatin remodeling
rkg03083
Polycomb repressive complex
rkg04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130086627 (rbb4l)
03083 Polycomb repressive complex
130086627 (rbb4l)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
130086627 (rbb4l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rkg03036
]
130086627 (rbb4l)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
130086627 (rbb4l)
Histone modification proteins
HAT complexes
HATB complex
130086627 (rbb4l)
HDAC complexes
Sin3A-HDAC complex
130086627 (rbb4l)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
130086627 (rbb4l)
PRC2.2
130086627 (rbb4l)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
130086627 (rbb4l)
Heterochromatin formation proteins
Other heterochromatin formation proteins
130086627 (rbb4l)
Chromatin remodeling factors
NuRD complex
130086627 (rbb4l)
NuRF complex
130086627 (rbb4l)
NuRF complex (fruit fly)
130086627 (rbb4l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_DCAF12
WD40_RFWD3
ANAPC4_WD40
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_RIG_1st
Beta-prop_SPT8
MIOS_WD40
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_SCAP
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
130086627
NCBI-ProteinID:
XP_056108696
LinkDB
All DBs
Position
Unknown
AA seq
426 aa
AA seq
DB search
MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDY
AVHRLVLGTHTSDEQNHLVIASVQIPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECSPDLRLRGHQKEG
YGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILASGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDTPASE
LEGQAS
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaaagaagtgtatgatgatgcagtggaagagagagtaataaatgaggaatac
aaaatctggaagaaaaacacaccattcctgtacgatcttgtcatgacacatgcactcgag
tggccgagtttaacggtgcagtggcttcctgatgtgaacaggcctgagggaaaggactat
gcggttcatcggctggtgttgggcacacacacttcggatgagcagaaccacttagtcatc
gccagtgtccagatccctaatgatgatgctcagtttgacgcgtcccactacgacagcgag
aaaggagcagagtttggagggtttgggtcagtgagtggaaagattgagattgagattaag
atcaaccatgaaggagaagtgaacagagccagatacatgccacaaaacccctgcatcatc
gccaccaagacccccacctctgacgtgctggtgtttgactacaccaaacacccatctaaa
ccagaccccagtggagagtgtagtccagacctgagactgcggggacatcagaaggaggga
tacggtttgtcctggaaccccaacctgagtggaaacttacttagtgcatcagacgaccat
acaatctgtctgtgggatatcagtgctgttccaaaggaggggaaaatagtagatgccaag
accatcttcactgggcacacagctgtggtggaggacgtgtcctggcaccttctacatgaa
tcgttgtttggctctgtggctgatgaccagaaactcatgatctgggacacacgatccaat
aacacatcaaagcccagtcactctgtggacgcccacacggctgaagtcaactgcctgtcc
ttcaacccatacagcgagtttattctggccagtggctcagcagacaagactgttgcattg
tgggatctgcgtaacctgaagttgaagcttcactcttttgagtcacataaggatgaaatc
ttccaggtccagtggtctcctcataacgagaccatcctggcctccagtggcacagacaga
cgcctcaatgtttgggacctgagtaaaattggagaagagcagtctgcggaggacgccgag
gacgggccacctgagctgctgttcattcatggtgggcatacagctaagatctcagatttc
tcctggaacccaaatgaaccctgggtaatctgttctgtgtcagaggacaacattatgcaa
gtatggcagatggctgagaacatctacaatgatgaagagccagacacccccgcgtcagag
ctggagggacaggcgtcataa
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integrated database retrieval system
