Rhinichthys klamathensis goyatoka (western speckled dace): 130086687
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Entry
130086687 CDS
T09701
Symbol
lrig1
Name
(RefSeq) leucine-rich repeats and immunoglobulin-like domains protein 1
KO
K24610
leucine-rich repeats and immunoglobulin-like domains protein 1/3
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
130086687 (lrig1)
BRITE hierarchy
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
Ig_2
ig
LRR_5
LRR_1
V-set
C2-set_2
LRR_9
C1-set
Ig_C17orf99
LRRCT
LRRNT
Motif
Other DBs
NCBI-GeneID:
130086687
NCBI-ProteinID:
XP_056108800
LinkDB
All DBs
Position
Unknown
AA seq
1017 aa
AA seq
DB search
MAAWLGQMGSLSYHVFYWLLTLELLINYGAPCPQNCTCTLDTTDCSRLDMTDVPQDLPKS
TVHLNLSHNKLTAVDMDILSNLPNLREVRLDHNELTSIPSFGDAAATVVTLFLHHNKIRR
LEGSLLQNFSALETLDLSNNDITELREHCFPPGLQIKDLHLSSNRIVHLEFGALKNLAGS
LQILRLSRNRLTHLPVKGLELPKLTQLELSRNRLRLIEGLTFQGLSSLEVLKLQRNNISK
LTDGAFWGLARMRVLHLDYNNLREVNSGSLYGLESLLQLYLSNNSISYFNPEGWGFCERL
RELNLSYNNLTKLSEGSFAKLVNLISLRLGHNSIIHITEGAFRGLSSLRTLELDHNDISG
TIEDTNGAFTGLENLNKLTLFGNKIKSVAKKAFSGLEALEHLNLGENAIRSIQPEAFSKM
KNLRYLHIQSDSFLCDCQLDWFPEWLVTRGLQPGVQATCAHPENLKGTSIYQAPPQSFVC
HDLPKPKITVHPVTTAAVLGKDVRLTCTAASSSSSPMTFTWRKDQETLRQAEVENFAHVR
ASDGGVMEYTTILHLRHVTFNHEGRYQCIISNHFGSSYSNKARVTVNVLPSFVKTPRDIT
IRTGTKARLECAAEGHPTPQVAWQKDGGTDFPAARERRMRVMPDDDVFFIMDVKPEDMGV
YSCTAKNTAGMISANVTLTVLETPHLAQEMEDRNVVVGETVALQCKALGSPPPRITWLKG
EEPLRPSDRHHFTPGNQLLVIGTTTFEDAGRYTCVMSNTLGTERAHCQLSVYQRYEDCAP
FTSPSTVTVGIIVIAVVTSIVVTSLVWVCIIYQTRKKSEECSVNTDETIVPPDVPSYLSS
QGTLSERQDVCIRVESNGGSQPNGHIENNGYDVCTDCLENGTSYSKHCNYLPHGIAPPSG
LEYQQTHQTSFTTHNTEPHCNGTPNGVRKECQTPIFPTNHDRVTTSPSSHQFDRKGLLVN
RSDTPPSLEETYHRPVKLLSGDCDIGSELTQTLLPNGHAYTPDATLSETESFGRASD
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtggctgggacagatgggatcactttcatatcatgtgttttattggcttttg
acactggaactgctaatcaattatggcgcaccgtgtcctcaaaactgtacgtgtacgctt
gatacgaccgactgcagtcgtttggacatgaccgatgtccctcaagacttgcctaagagc
actgtgcatctaaatctgagccacaacaagctgacagcagtcgatatggacatcctctcc
aatctgcccaacctgagagaagtgaggcttgaccacaatgagctgacatccatcccttca
tttggagacgcagcagcaacagtcgttacactgttcttgcaccataataaaatccgcaga
ctggaggggagcctgctgcagaacttctctgctctggagacgctagatctgagtaataat
gacatcacagagctgagagagcactgcttccctccggggttacaaatcaaggacctgcac
ctgagcagtaataggattgttcatctggagttcggggcgcttaagaacctcgccgggagt
ctgcagatcctcagacttagccggaaccgactgacccaccttcctgttaaaggcctggag
ctgcccaagcttacacaactggagctaagcaggaacaggttgcggttgatcgagggactc
accttccaaggtttgagcagtttagaagttctcaagcttcagagaaacaacatcagcaag
ctgacggatggggcgttctggggcctggcccggatgagggttctgcacctggactataac
aatctgcgggaggtgaacagcggctctctgtacggtctggagtcgctcctgcagctctac
ctctccaacaactctatctcttactttaaccctgagggctggggcttctgtgagagactc
cgagaactgaacctgtcctataataacctgacgaagctgtctgagggtagttttgccaag
ctggtgaatttgatctcgctgcgtttgggacacaattccatcattcacatcacggaggga
gcgttcagaggccttagttccctgcgtacgctggagttggatcacaatgacatctctggc
actattgaggacaccaatggggccttcactggcctcgaaaacctcaacaagctaactctg
tttggaaacaagatcaagtcggtggccaagaaagccttctcgggcctggaggctctggag
cacctgaacttgggggaaaatgccatccgctccatccaacccgaggcattcagcaagatg
aagaacctgcgttaccttcatattcagagtgatagttttctgtgcgactgccagctggac
tggtttccggagtggctggtgacacgagggctgcagccgggcgttcaggccacatgtgcc
cacccagagaacttaaagggcaccagcatctaccaggctccaccacagagctttgtttgt
cacgatcttcccaaacccaagatcacagtccaccctgtcaccacggcagcagtattgggc
aaagacgtgcgtctgacctgcacggctgccagcagtagcagctcacccatgaccttcacc
tggcgcaaggaccaggagacgctacgccaagctgaggtggagaacttcgcccatgtgcgg
gccagtgacggaggggtgatggagtacaccactatcctccacctccggcacgtcaccttc
aaccatgagggccgctaccagtgcatcatcagtaaccacttcggctcttcctactctaac
aaggcccgcgtcaccgtaaacgtgctgccttcattcgtcaagaccccacgcgacatcacg
atccgcacggggacgaaggcgcggttggagtgcgcggccgaagggcatccgactccccag
gtggcgtggcagaaagatggtggtacggatttccctgccgcccgagagcgccgcatgcgt
gtgatgcctgatgatgatgtcttcttcatcatggacgtgaagcctgaggatatgggcgtg
tacagctgcacggccaaaaacacggcgggcatgatctccgccaatgtcactctgacagtg
ctagagacccctcatctggcacaggaaatggaggatagaaatgtggtggtgggcgaaact
gttgcattgcagtgcaaggctttaggcagcccacctcctcgcatcacctggctaaagggg
gaggagcctcttcgtcccagcgaccgtcaccacttcactccagggaatcagctcttggtg
atcggcaccaccacctttgaggatgcaggacgctacacgtgtgtcatgtccaacaccctc
ggcacagagcgagctcactgccagctcagtgtttaccagcgatacgaggactgcgcacct
tttacaagtcccagcactgttactgttggaatcattgtcatagctgtggtgaccagtatt
gtggtgacatcactagtttgggtgtgtattatctaccagacgaggaagaagagcgaggag
tgcagtgtaaacacagacgagacaattgtccctcctgatgtccccagttacctgtcctct
cagggcactttatcagagagacaggatgtgtgtatacgagtggagtccaatggcggatct
caacccaacggacacatagaaaacaatggctatgatgtgtgtacagactgcctggaaaac
ggtacaagttactccaaacactgcaactacctccctcatgggatagcgcccccttcaggc
ctggagtatcagcagacacaccagacatcattcaccacccacaacactgaaccacactgc
aatggcacacccaacggggtcaggaaagagtgtcaaactcccatctttcccaccaaccac
gacagggtgacaacatcgccctcatcgcaccagttcgaccgaaaaggactgttggtgaat
cggtcagacacacctccctcacttgaagagacctaccatcggccagtaaagctcctgtct
ggggactgtgacattgggtctgagcttacacagactctattacccaacggacacgcatat
acgcctgatgccaccctaagcgagactgaatccttcgggcgggccagtgactaa
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