Rhinichthys klamathensis goyatoka (western speckled dace): 130086695
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Entry
130086695 CDS
T09701
Symbol
tmf1
Name
(RefSeq) TATA element modulatory factor isoform X1
KO
K20286
TATA element modulatory factor
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130086695 (tmf1)
Membrane trafficking [BR:
rkg04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
130086695 (tmf1)
BRITE hierarchy
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
Motif
Other DBs
NCBI-GeneID:
130086695
NCBI-ProteinID:
XP_056108807
LinkDB
All DBs
Position
Unknown
AA seq
1136 aa
AA seq
DB search
MSWFNASHLSSFAKQALTTAQKSIDRVLDIQEEEQWGDTTNPSFADPPGKTVSTGWGRNQ
WDSPSEEHTKTLPPSSEAITKPVTWTVVDESEDFFSAFLPHGEIQTVSNTKVVSVPPAKS
NRRLREKADQEKELEVSDSQGQTDLSKCSSQETFEIKPTGTELLEQNSSSTDEQSQSELV
VPASVVAPEEAAEQEASEDMTESDGLALTSDVTLTNVTLSSSEAESVGVFEPALTIETKN
PDNALPVPSKEILLESKDAKSEDRQSNTPSPPVSAFSSGTSTTSDIEVLDHESVLSESSA
SSRQETAEAKAGLHLMQGSFQLLSASTCSDFPRLDEYPKLTESCGSSSDAFERIDSFSMQ
SLDSRSVSEVNSDDEIPGNRTLASITAGPLPAPPQSVPQTKQEEEDGITESINDQSLDDN
EMEESGRSATPVNCEQTDELQEGEQETESDLTLTNQKTDVNETAASQSTGEKLEDSPCQI
FDLQKIIEELSNRLEKRESQLLVVSKDKARLEEECDNLKDEMISLQEESSAVQSLKDEFT
QRIAEAERKAQLACKERDIAKKEIKGLREELASRLNSNETLELIKEKEEQIRELLEEGEK
LSKQQLQHSNIIKKLRVKERESDAQITKQTKKLKEQEEELKHLQQVLDGKEEVEKQHREN
IKKLNAVVERQEKELSKLQTSSEELQENNRSLQAALDSSYKKLAELHKANATKDSEAQEL
ALSREVHAKEELSLALEKVQEESRLQQEALANQVADLRLALQRAEQQQAKKEDYLREEIS
ELQQRLQEAESRNQELSQSVTSASRPLLRQIENLQATLGAQTASWEKLEKNISDRLADAQ
AQLAVSIEKERSATEELLAIRAQIASLESQASLLRQEKGRLQGQLDAEKMRREKLEDDFS
RERVELENLKWEYARVSEEAKKEKLLLANQLEMEKMKVEQEKKKCYLAQEALKEKERKSL
SLSVTDAPASSTPSLSRSSSVSGAEHAGLPSSIFSQQEDSLDHSFSTMTMSISGTNLYEA
ARLGGGSSIIESLQSQLKLREGEIAQLQMEIASLERSRTVMTEELVRLTNQNDEIEDEVK
EIPRLKVQLKDLEQRHNTILQMYGEKAEEAEELRLDLEDVKNMYKTQIDELLKNQK
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgagttggttcaacgcgtctcatctgtcgagttttgccaaacaagctctgacaactgct
cagaaatccatcgacagagttctggacattcaagaagaggagcagtggggtgacacgacc
aacccgtcctttgctgatccaccaggcaagacggtatcaacaggatggggtaggaaccag
tgggactcgccctctgaggagcataccaagactctccctccatcatctgaggccattact
aagcccgtcacatggaccgttgttgatgaatcggaggatttcttcagtgcctttctgcct
catggggagatacaaactgtaagcaacactaaagtggtgtctgtgccacctgccaagtca
aaccgcagactacgggaaaaagcagaccaggagaaggagctggaagtcagtgattcacaa
ggtcagacagacctcagtaaatgcagcagccaggaaacttttgagataaagccaactggg
acagagcttttggagcaaaattcatcctcgacagatgagcagtcacaatcagaactggtt
gttcctgcttcggttgttgcaccggaagaagctgccgaacaggaggccagcgaggacatg
acagagtcagatggcttggctttaacttcagatgtcacactcacaaatgtaactttatcc
tcttcagaggccgaatctgttggtgtgtttgaacctgctttgaccatcgagaccaaaaat
ccagataacgccttgcctgttccttctaaagaaatcctgttagaatccaaagacgctaaa
tcagaggacagacaaagcaacaccccgtctccccctgttagtgccttctcttctggtact
tccaccaccagcgacatagaggttttggaccacgagagtgtgctaagcgagagctcggcc
agctccagacaggagaccgcagaggctaaagctggtctgcacctaatgcaagggtctttc
caactgctctccgcctcaacatgcagcgacttccctcgtttggatgaatacccaaaactc
acggaaagctgcggctcctcgtctgatgcctttgagcgcattgactcatttagcatgcag
tcgctggacagccgcagtgtcagcgaagtgaattctgatgacgagatcccaggcaaccgc
acattagcctccatcacggccggacctttgcctgctcctcctcagtcagtgccacagact
aaacaggaggaagaggacggtataactgagtctattaatgaccaatcactggatgataat
gagatggaggagagtggccgcagtgcaacgccagtgaactgtgagcagacggatgagctg
caggagggcgaacaggaaactgaatctgacctcacactgaccaaccaaaaaactgatgtg
aacgaaactgcagcatcacagagtactggagagaaactggaagattcaccctgtcagatt
tttgatctccagaagattattgaggagctttctaaccgactagagaagagagaatcacag
ttgcttgtggtcagtaaagacaaggccagacttgaggaagagtgtgacaatctcaaagat
gagatgatcagcttgcaggaagaaagctctgctgttcagtctttaaaagacgagttcact
cagcgcatagctgaagctgagaggaaagctcaacttgcctgcaaggagagagacatcgcc
aaaaaggaaatcaagggcctcagagaagaactggcaagcaggctaaactcaaatgagact
ttggaactgataaaagagaaagaggaacagatccgagagcttcttgaagaaggtgagaaa
ctgtccaagcagcagttgcagcactctaacatcataaagaaactgcgtgtgaaagagaga
gagagtgatgcacaaatcaccaaacagaccaaaaaactaaaggaacaggaagaggaacta
aaacatttgcagcaggttttggatggtaaggaggaagtagaaaagcagcacagagagaac
attaagaagctgaatgctgtagtggagcggcaggagaaggaattgagtaaactgcagacc
agcagtgaggagcttcaggaaaataatcgcagtttacaagcagcactcgacagctcctac
aaaaagttggcagagttgcacaaggccaatgccactaaggatagtgaagcccaggaactg
gcactgagcagagaggtacatgcgaaagaagagctgagtttggctttggagaaagtccaa
gaagagtcacgcctacaacaagaggcactggccaatcaggtggcagatttgaggctggct
ctacagagggccgaacagcagcaggccaagaaggaagattacctgagagaggagatcagt
gagttacagcagaggttacaagaagcagagtccagaaaccaggaacttagccaaagtgtt
acatcagcatcacggcccctcttgcgacagatagagaacctccaggccacacttggtgcc
cagacagcatcatgggaaaaactagagaagaacatctctgatcgcttagctgatgcccaa
gcccagcttgctgtttctatagagaaagagcgttcggctacagaggagctactagccatc
cgagcacaaatagcatctttagaatcccaggcttctttgttgaggcaggagaaaggacgc
ctgcaggggcagctggatgcggagaagatgcggcgggaaaaactggaggatgactttagc
agggagcgtgtagagctggagaatcttaaatgggaatatgctcgagtctcagaagaggcc
aagaaggagaagttgcttctcgccaaccaactggaaatggagaaaatgaaggtggaacag
gagaagaagaaatgctaccttgcacaagaggccctcaaagaaaaggagaggaagtctcta
agtttgtctgtgactgatgctccagcgtcctccactccctcattgtcccgctctagttcc
gttagtggggctgagcatgctggcttaccatcctccattttctcacagcaggaggattct
ctcgaccattcttttagcactatgaccatgtctatcagtgggactaacctttatgaagcg
gctcgactgggtggtggatccagtatcattgagagcctgcagtctcagctcaaactcaga
gagggcgagatagcccagctgcagatggagattgctagtctagagagaagtcgaactgtg
atgacagaagagcttgtgcgactgaccaatcagaacgatgagatagaggatgaagtgaag
gaaatccctagactgaaagtgcaactgaaggatctagaacaaaggcacaacacaatcctg
cagatgtatggagagaaggcggaggaggcggaagagctgcgtctggacctggaggatgtg
aagaacatgtacaaaacgcaaatagatgaactcttaaaaaatcaaaaatag
DBGET
integrated database retrieval system
