Rhinichthys klamathensis goyatoka (western speckled dace): 130086814
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Entry
130086814 CDS
T09701
Symbol
trip11
Name
(RefSeq) thyroid receptor-interacting protein 11
KO
K23368
thyroid receptor-interacting protein 11
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130086814 (trip11)
Membrane trafficking [BR:
rkg04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
130086814 (trip11)
Retrieval pathways
130086814 (trip11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GRAB
CCDC39
PRKG1_interact
SlyX
Motif
Other DBs
NCBI-GeneID:
130086814
NCBI-ProteinID:
XP_056108990
LinkDB
All DBs
Position
Unknown
AA seq
1987 aa
AA seq
DB search
MSSWLGGLGSGLGQSLGQVGGSLSSFTGQISNFTKDILLESAEEVGDAAASELQVSSSRF
QELETSYVTQKSEYERLRRLNSELEEKLEAAEIQIKQQSLENRTLLQQKEVEISHLKARQ
SCLQEEFQKLQHSSQAATSSSFTDAAVLPVTTAATTTTSSSFLHGSSAVHQGFHGDEVDL
SDVLWSQQEINRLSNEVHRLEADVAHWRRVAQASKLPGVDGNGDQGEVLKMQRTIKELRE
GMAREVDEHQHELAALQDAQRQKMAEISKRHRQELAEYEERIEELEEQLQSDGGSVVKST
TVQDSAKLQELQSTIQSLQEEAELQHKQYRDLMVRLEEAEHHKAQIKQEKEEATTENTEL
LQNYSRLQKSVNELQDRVQEQEGKSMLKAQQDNEIQTLKKALADAEKEMARLKSLTESGP
LEEVEHADILELNTIIDTLRTGKEEMEREKLALLERLTLAEERHRTGESKSAVELSQEVS
DLKSQLDRRDQALKQAHLDIETLSAELEELDKQNQEATQHLIAVKDQLSMQKTQAEAEEA
RLQSDLSSSHNQKRTLQLELEAHGEKLSQSAFSLNELHMTKQQLETTLKELREKLCKSQD
LGRELRQESSDLKRALQERETELIALREELSHSGDQGNEFEGHRKVLEARDKEIQDLRTE
LAEMKTSFERSALEDFELKIENRKLKEENTQALDKIDCLERQIQDGQASLSRMSLEKDTR
IEASKLEKSQLESELSQSEKRLSDQAKQYQQTIDELTRARSMDASALQTEHERMVKLNQE
KDLTIAELRREIEQMVSDHKDTSEMLDITVAGQNQLTELLQEKDSFAETLKAQAVEMQKE
LEGSVLRVTQECDSLRRLVEEKDKQLGAMKEDNSHLKEEIDRVRDQQSRPQLLSEPRTLD
IITELEAEVTQLKAARDQLEEEVQALRTASEEQQATTLQSQRSLQVLQSEIEQVRSRHEQ
SSRNYERLISAKDEEIVLLQSEVEGLSTQGQSQIQSVEILQEDKTQSLNGENGNEKHDLS
KVEIEKLVKGIREKETEINQLNEKNLSLTKQLDQFVVAQNELGKLSQMVLQKDLEIQALH
ARVSGGHGQDVVFLQQQLQAYAVEREQVLAVFNEKTRENSQLRSDYHRIMDIVAAKEAAL
LKLQQENQRLSTMSDPSGSQEMFRETIQNLSRIIREKDIEIDALTQKCQTLVSVLQTTGV
SDSMSGGSGGVSSNQFEELLQERDTLKQQVKKMEEWKQQVITTVRNMQHESAQLQEELLK
LQGQVSADSDCSSKLSVDYTRLIQSYEQKEKKLGLLNQELAQVQQTISQLSSTKDVLLGK
LGSVKQSPEVSAMIATQAFAPPNLKEAALPGQDESVHQELQSMQRTLAEKESMIRTLQEN
NHRLSNSASLSESEQRSHAEELKHAREKQESLHRSLREKDLLIKTKGDQLSQVSENLRNR
ENDNEVLKQAVTNLKERALILELDVKKLKEENEAIAAKAREKETEFRALQETNMQVSLLL
REREFQFSAVNEKATAMEKMLKDKEQGKSGELNQLLNEIRSMQDKAVLFQQERDQVMMAL
KQKQMETSALQSELQHMRDKEQRLKQEVERLRNHLLEIEDSYTREALGAEDREGELKRRV
ALLEERLASSSNAVESASQQASLQVESLQEQLNGAVRQRDEALIQLRSTQDQVNQYAVSL
SNLQMVLEQFQQEEKAMYSAELEKYKREKEEWRNKAENLGDQAAALQINLDEANAALESA
SRLTDQLDLKEEQIEDLKKQVDVRQDMLEEAQRKLMNLLNTTEGKVDKVLMKNLYMGYFH
TPRNKRSEVLRLMGNVLGLDRDEVCELLQEEGKSGMTGWVSSWLGGRAVQSVPNTPQRPT
HAQNLNSSFSEMFVKFLEVESTPALPAPKLPVYDIKPLSVPPPGRSTANTPASGVSGSGK
RTGDSNPFLAPRSAAVPLLNPAGTGSTAGAGGHLLMKPISNALPTFTPVPVSAESSGGAL
LKDLLKQ
NT seq
5964 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcctggctgggagggttgggctctggcctgggtcagagtctgggtcaggtcggg
ggaagcttgtcttcatttaccggacagatctctaattttaccaaagatattcttctggaa
agcgcagaagaagtgggagatgctgcggcgtctgagctgcaggtgtccagctctagattt
caagaactggagacttcatatgtaacacaaaaatctgagtatgagcgcttgcggagactc
aactctgagctggaggagaagctagaggcagcagagattcagatcaaacagcagtcattg
gaaaacagaaccctcctgcaacaaaaagaggtggagatcagtcacctcaaggctcgtcag
agttgtctgcaggaggagtttcagaaactccaacactcttctcaagctgcgaccagctca
tccttcaccgatgctgctgtgcttcccgtcactactgctgccactaccactacttcgtct
tcctttctgcacgggtcctcagctgtccatcaaggcttccatggcgacgaggtggacctc
agtgatgtcctgtggtcgcagcaggaaattaaccgtctttccaatgaggtgcatcgtcta
gaggctgatgtggcccattggaggagagttgcacaggcatcaaagctgccaggagttgat
gggaatggagaccagggtgaagttctgaaaatgcaaagaacgatcaaggagctgagagag
ggaatggcacgggaggtggatgagcaccagcatgaactggcagctttgcaggatgcccag
aggcagaaaatggctgaaatctcaaaacggcacaggcaggagctggcagagtatgaggag
agaatcgaggagctcgaagagcagcttcagagtgatggtggaagtgttgtcaaatcaacc
acagtgcaggattccgccaaacttcaagagctgcaatcgaccattcagtctttacaggag
gaggcggagcttcagcacaaacagtacagagacctaatggtcagattggaggaggcagag
catcataaagcccagataaagcaggagaaggaggaggctaccacagaaaatacagaattg
ttgcaaaattacagtcgccttcagaagtctgtaaatgaactccaggatcgagtccaggag
caggaagggaagtctatgctgaaagcccagcaagacaatgagatacaaaccctgaaaaaa
gctctggcagatgcagagaaagagatggctagattgaagagtctcactgagagcggtcct
ttggaagaagttgaacatgctgacattctggagctcaacaccatcattgataccctcagg
acagggaaggaagagatggagagagaaaagcttgcgttacttgagagactgaccctggcc
gaggagagacacaggactggagagtcaaagagtgctgtggaactgtcacaggaagtttca
gacctaaagagccagctagacagacgggaccaagcactaaagcaagcccatcttgatata
gagacactcagtgctgaactggaagaactggacaagcagaaccaggaggccacacagcat
cttattgcagtgaaggaccagctgtccatgcagaaaacacaggctgaggcagaagaagcc
cgtcttcagtcagatctcagctcctctcataaccagaaacggactcttcaactggagctg
gaagcccatggggagaagctaagtcaaagtgccttctccttgaatgaactgcacatgaca
aagcagcaactggaaaccacactaaaggagttgagggaaaagttgtgcaagtcacaggat
ctgggcagagaactgcggcaggagtcctccgacctcaagagggcacttcaggagagagag
acagaacttattgcacttcgtgaggagttaagtcattctggggatcaagggaatgagttc
gagggacaccggaaggtacttgaggcaagggataaagagattcaggacttaagaacagag
ctagcagaaatgaagacttccttcgaaaggtctgctttagaagactttgaattgaaaatt
gaaaataggaagttgaaggaagagaacactcaggctttggacaagatagactgtttggaa
aggcagatccaagatggtcaagcctctctaagcaggatgtccctggagaaagatacccgc
attgaagcctcgaaactcgagaaaagccagttagagtctgagctgagtcaatctgagaag
cgactatcagatcaagccaaacagtatcaacaaaccatcgatgaactgaccagagcacgc
tctatggatgcttctgcactgcagaccgaacacgagcgaatggtgaaactgaatcaggag
aaagatctcacgattgcagagctcaggcgtgagatagagcagatggtctctgaccacaaa
gacaccagcgaaatgttggacatcactgtggcaggtcaaaatcaactcacagagcttctg
caggagaaggattcctttgccgaaaccctgaaagctcaagctgtggaaatgcaaaaggaa
ttagagggcagtgtcttgagagtaactcaagagtgtgactctctgagaaggttagtggag
gagaaggacaaacagcttggagccatgaaggaagataacagccatctgaaagaagagatt
gaccgtgtgcgggaccagcaaagcagaccgcagttattgtcagagcctcggacactggac
atcatcacagagcttgaggcagaggtgacccagctcaaagctgccagagatcagcttgaa
gaagaggtccaagctctgaggacggcatcagaggagcagcaggccacaacgctgcagtcc
cagcgttctctacaggtgctacagagtgaaatagagcaagtacggtcaagacatgaacaa
agctctcgcaattatgaaagactcatcagtgctaaggatgaggagattgtactgcttcag
tcagaagtggagggcctaagcacacaaggacagagtcaaatacagtccgtagaaatccta
caggaggacaagacccagtcattaaatggtgaaaatggtaacgagaaacacgacctttca
aaagtagagattgagaaactagtgaaagggatcagggagaaagagactgagattaaccag
ctaaatgagaaaaacctctctctaaccaagcagcttgaccaatttgttgtcgctcaaaat
gagctgggaaaactgtcacaaatggtccttcaaaaagatctagaaatccaggctctgcac
gctcgagtgtctggtggccatggtcaagatgtggtgttcctgcagcagcaactgcaagca
tatgcggtggaacgtgaacaggtgctggccgtgtttaatgagaaaaccagagagaacagc
caactgcgctcagattaccatcgaattatggacattgttgcagccaaggaagcagccttg
ttgaagctccagcaagaaaaccagcggctctccaccatgagcgacccttcaggcagtcaa
gagatgtttcgagagaccattcagaacctctcccgcatcatccgtgagaaggatatcgag
attgacgccttgactcaaaaatgtcagaccctagtctctgtccttcagacaactggcgtc
agcgattccatgagcggtggctcaggaggcgttagcagcaaccagtttgaggagctccta
caagaacgtgacaccctcaaacaacaagtgaagaagatggaagagtggaaacagcaggtg
atcacaacggtgaggaacatgcagcatgaatctgctcagttgcaagaggagctcctcaag
cttcaggggcaggtttctgccgacagcgactgcagctcaaagctctcggtggattacacc
agacttattcagagctatgagcagaaagagaaaaagctgggattgttgaatcaagagctg
gcacaggtgcagcagaccatcagccagctgagcagcaccaaagacgtgctgcttgggaaa
ctaggcagtgtcaagcaatctccagaagtttctgctatgattgctacccaggcttttgct
cctccaaacctgaaggaggcagcactaccaggccaagatgagagtgtacatcaggagttg
cagtcaatgcagagaacattagcagagaaggagagcatgataagaactctgcaggaaaac
aatcatcgcttgtcaaattctgcatctctgtctgaaagtgagcagagaagccatgcagag
gagctcaagcatgccagagagaagcaagaatcgctacaccgctccctcagagagaaagat
ctactcattaagaccaagggagaccagctcagtcaggtgagtgaaaatttacgtaaccgt
gagaatgacaacgaggttttgaagcaggctgtgacgaacctcaaagagcgtgcactgatc
ctggaactcgatgtgaagaaattaaaggaggagaatgaagcgatagcagcaaaagctcgc
gagaaagagacagagttccgtgccctgcaggagaccaacatgcaggtgtcactgttgctt
cgggagcgagagtttcagttcagtgctgtgaatgaaaaggccactgccatggagaagatg
ctaaaagataaagagcagggtaaatctggtgagctgaaccaactgttgaatgaaattcgg
tccatgcaggacaaggcagtattgtttcagcaggaaagagatcaagtgatgatggccctc
aaacagaaacaaatggagacatctgctctgcagagtgagctgcaacatatgcgtgataag
gagcagcgcctgaagcaggaggtggagcgtttgcgcaatcacctgttagagattgaggat
tcgtacacacgtgaggctttgggagctgaagacagagagggagagctgaaacgcagagtg
gcactcctagaagagcggcttgcatcttcctctaacgccgtagagagcgcaagtcagcag
gcaagcctgcaggtggagtctcttcaggagcagttaaatggtgctgtcagacaaagagat
gaagcactaattcagctccgttccactcaggatcaggtcaaccagtatgcagtgtcactt
tctaacctgcagatggtgctagaacagtttcaacaagaagaaaaagccatgtactcagca
gaactggaaaaatacaagagagagaaagaagagtggagaaataaagctgaaaatcttggg
gatcaggctgctgctctgcaaataaacctggatgaagcgaacgcagctctcgaatctgcc
tcccgcctcactgatcagctggacctcaaagaggaacagatagaagatctgaagaaacaa
gtggatgtgagacaggatatgttggaagaggctcagaggaaactgatgaacctcctgaac
accaccgaaggcaaagtggataaggttctgatgaagaatctttacatgggctattttcat
accccccgaaacaagcgctctgaggtgctgaggcttatgggtaatgtgcttgggttggac
cgagatgaggtgtgcgagttgttacaagaagagggcaagagtgggatgaccggatgggtc
tcgagttggctgggaggcagagccgttcagagtgtacccaacaccccccaaagacctaca
cacgcacaaaaccttaattcgtccttctctgagatgttcgtgaagttcctggaagtagag
tctactcctgcactccctgcccctaaactgcctgtttatgacatcaagcccctgagtgtg
cccccacctggccggagtactgctaacacacctgcatcaggtgtttcaggctcaggtaag
cgcactggggattcaaaccctttcctggcgccccgctctgctgccgtaccccttctcaat
cccgcaggtacaggtagcactgcaggagctgggggacacctgctcatgaagcccatctca
aacgccctgccaacgttcacacctgtacctgtgtcagctgagtccagcggtggggccctg
ctgaaagatttactcaagcagtga
DBGET
integrated database retrieval system
