Rhinichthys klamathensis goyatoka (western speckled dace): 130086840
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Entry
130086840 CDS
T09701
Symbol
usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rkg01002
]
130086840 (usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130086840 (usp42)
Enzymes [BR:
rkg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130086840 (usp42)
Peptidases and inhibitors [BR:
rkg01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
130086840 (usp42)
Ubiquitin system [BR:
rkg04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130086840 (usp42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
130086840
NCBI-ProteinID:
XP_056109027
LinkDB
All DBs
Position
Unknown
AA seq
1168 aa
AA seq
DB search
MTIVDKPPEKSDLESVRCKHSSSLTPFSSRDMESSSSSWSVGPSATELSRAKTACMAPTI
GATVNGSNNTALQVERPREQVVMNSGDGIALPQKVLFSPERLCLKWNQGHRIGAGLHNLG
NTCFLNSTLQCLTYTAPLANYMLTREHSKTCHEPGFCMMCTMQNHIIQVFANSGNVIKPI
SVLNELKRIGKHFRFGSQEDAHEFLRYTVDAMQKSCLPGNKLDRQTQATTFVHQIFGGYL
RSRVKCLNCKAVSDTFDPFLDISLEIKTAQTLTKAFEQFVKPEQLDGDNAYKCSKCKKMV
TASKRFTIHRSSNVLTVSLKRFTNFNGGKITKDVRYTEYLDLRPFMSQSHGEPQIYALYA
VLVHSGFSCHAGHYYCYIKASNGQWYQMNDSSVSLSDIRTVLNQQAYLLFYIRSPDVKNG
SDFSQMNHTPGQSSPRPSIPIKMNGPQYTSTSFIGPQLPPHMLKNSSYINGNGSSKEYHG
CSKPNRSFCGVTKIGSGLSHTSSSASASSSTSLVRPTGIPDSSKRPKLTFLIGQGKPVRP
AQTQSSPNCSLSSASHPQPTSSSTSMSTSGFPQVKQVNGTHSGASFLVPYGQESSEESDQ
EAGALENGLAKPHLAPEINNGNGVKDDAQSHNSSSLPQLTSKTNGSNGFHVCESGSEPAH
KSQNGLPKANGFNHTDKVMGTSHSSSQISNTSDSSGLQFSLKCENSESSSKPPSTDDQPC
SSPSNKRMNPPSDALSQSEVHVESAPSSNASLVSKTADTDLHCQTASKVESIPSRATHTA
AGTSDHQANNSLNLHIGDGHTSPHRLKEVFRCSEGESKESKPSHLDKFGSGDGQRVGEDG
NKISERPHFSSPLKDRDRYRHHREYSERSRSRYGYSHRDSRPIREHSSSRDRHHRDREVE
RHWDRFSHHRREHHHSQRRPREERNWSRDRRFVSESYRPSGHHNRDGYSSHSNRGVEGAH
GRTAHTVNSSKSRPSSSRSLSPLSGHNKRKRSPSFDTRESSDECRAKKSKKKKRNKDKHR
HSERDPSEGNEDSSSKRHKKKKKKKRRREDEERPHTGRDNALRREEHDTRARNGAERGSQ
HHSSEFLNNVHRDHMEDQQQLNGQKANGCYSGGELDLCHTGIEKDVKYKHFDHATTVNST
KTLSNGNGDVDGVYHRTLSDVEEVTRPH
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaaacctccagagaaatctgacctggagtcagtgcggtgcaagcac
tccagctccctgacacctttctcctccagagacatggagagcagtagttcgagctggagt
gttggtccttctgccactgagctttcaagagccaagactgcctgtatggccccgaccatt
ggagcgactgtgaatggtagtaataacacagcactccaagtcgaaaggcccagagagcaa
gtggtgatgaacagtggggatggcattgctcttcctcaaaaggtcctgttttccccagag
cggctctgcttgaaatggaaccagggccaccgcattggagcaggtctccataacctgggc
aacacatgtttcctgaactctaccctgcagtgtctgacctacacggctccccttgccaac
tacatgctgaccagagagcattccaaaacatgtcatgagcctgggttttgcatgatgtgt
accatgcagaatcacatcatccaagtgttcgccaactctggaaatgtcataaagcccatt
agtgttcttaatgaattgaaacggataggaaagcatttcagatttggaagccaagaagat
gcccatgagttcttgaggtacacagtggatgctatgcaaaagtcctgcctccctggaaac
aaactggacaggcaaactcaggcaaccacttttgtacatcagatatttgggggttatctg
agatccagagtcaaatgtttgaattgcaaagcagtttcggatacttttgaccctttcctg
gatatttcactggagataaagacggctcagacactcacgaaagcatttgagcaatttgtt
aagcctgagcaacttgatggggacaatgcttataaatgctccaaatgtaagaaaatggtt
actgcatcaaagagattcaccattcatcgcagttctaatgttctcactgtctcactgaag
cggtttaccaactttaatggaggaaaaattacaaaggatgtaagatacacagagtatcta
gatttgcggccattcatgtctcagtctcatggggagccacaaatctatgctctatatgct
gtgctggttcattctggtttcagttgccatgctggacactactactgctacattaaggct
agcaatgggcagtggtatcagatgaacgactcatctgtatctctcagcgatattagaaca
gtgcttaatcagcaagcatacttgctgttctacattaggtcacctgatgtgaaaaatgga
agtgactttagccagatgaaccatactccaggccagtcatctccacgaccatccattcca
atcaagatgaatgggcctcagtacacctccacatccttcattggtcctcagctgccacct
catatgctcaagaactcgtcgtacattaatgggaatggttcttcaaaagaataccatggt
tgctccaaacccaacagaagtttctgtggtgtgaccaaaataggatctggcctatctcat
acatcctcttctgcatccgcgtcctcttctacttcgcttgttcggcccacgggcattccc
gactcatccaagaggccaaagttgacgtttctcattggtcagggcaagcctgtgagaccg
gctcagactcagtcaagccctaattgctctttgtcgtcagcctctcaccctcagcccaca
tcctctagcacctcaatgtctacctcaggcttcccacaggtcaagcaggtcaatggaact
cactctggagcttctttcttggttccttatggtcaggaatcatctgaagaatccgaccaa
gaggctggagccttggagaatggattagctaagcctcatcttgctcccgagataaacaat
gggaatggggtaaaggatgatgcccaatcccacaattccagttcactgcctcagcttacg
tcgaagacaaacggatctaatggctttcatgtgtgtgaaagtggatcagaacctgctcat
aaatcccagaatggccttcccaaagccaatggttttaatcatactgataaggttatgggc
acttcacattcttcatcccagatttctaatacgtctgatagttcaggactgcaattcagc
ttaaaatgtgaaaacagtgaatcaagttccaaaccgccgagtactgatgaccaaccatgc
tcctcaccttcaaacaaaaggatgaaccctccttcggacgctttatctcagtctgaagta
catgtagagtctgcaccttcatctaatgcctcattggtctcaaagactgcagacactgac
cttcattgccagacagcttcaaaagttgagtcgattccgagccgtgccacccatacagcg
gctggcacgtcagaccatcaggccaacaacagtctcaacctccatatcggtgatggtcac
acaagtccacacaggttaaaggaggtgttcaggtgcagtgaaggggaaagcaaagagtca
aaaccatcacacttagacaagtttggctctggagatggacagagggtgggtgaggacggg
aataaaatttcagagcggccacacttttcatcacccctgaaggacagggaccggtacagg
caccacagggaatatagcgaaagaagccggagccgatatgggtacagtcatcgagatagc
cgtcccatcagagagcactcctccagtagagaccggcatcacagagatcgtgaggtagag
agacactgggacagattctcacaccatcgtcgagaacaccaccactcccaaagaagaccc
agagaggaacgcaactggagtagagataggaggtttgtgagtgaatcttatcgtccttct
ggacaccataacagggatggatattccagtcacagcaatcgtggggtggaaggtgcccat
ggaagaaccgcccatacagtgaacagttcaaaaagcagaccctcatcttcccgctctctc
agcccactgtccggacataacaagcggaaacggagtccgtcgtttgatacaagagaaagt
tctgatgaatgcagagcgaagaaatccaagaagaaaaagagaaacaaagacaaacacagg
cactcagagagggatccatcagagggaaatgaggatagcagctccaagagacataagaag
aagaaaaagaaaaagaggaggagggaggatgaggagaggccacacactgggagagacaac
gctctgaggcgggaagagcatgatactagagctaggaatggtgcagagagaggaagtcag
caccacagctctgagtttctcaacaacgtccaccgagaccatatggaggaccagcaacag
ctcaatggacaaaaagctaatggctgttacagtggaggtgaacttgatctttgtcatact
gggatagaaaaagatgtgaaatacaaacattttgatcatgctaccactgtcaacagcaca
aagacactctcaaatggaaatggagatgtagacggtgtctatcacaggaccctttcagat
gttgaagaagtcacacgtccacattaa
DBGET
integrated database retrieval system
