Rhinichthys klamathensis goyatoka (western speckled dace): 130086855
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Entry
130086855 CDS
T09701
Symbol
stambpl1
Name
(RefSeq) AMSH-like protease isoform X1
KO
K11867
AMSH-like protease [EC:
3.4.19.12
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rkg01002
]
130086855 (stambpl1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130086855 (stambpl1)
Enzymes [BR:
rkg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130086855 (stambpl1)
Peptidases and inhibitors [BR:
rkg01002
]
Metallo peptidases
Family M67
130086855 (stambpl1)
Ubiquitin system [BR:
rkg04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
130086855 (stambpl1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP8_dimer
JAB
Prok-JAB
DUF7066
DUF6447
Motif
Other DBs
NCBI-GeneID:
130086855
NCBI-ProteinID:
XP_056109050
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MDQGFSFSTLKKLAAEPDHTDVTLPAVERVRALSKMGYNIEINEDIAPRRYFRSGVEMER
MAAVYLEEGSLENAFVLYNKFITLFVEKLPSHRDYQQCNVPEKQVIMKKLQEVAFPRKDQ
LKRLLHEKYSKEHSEYLKSQTQAMAVDTCGERLQKMSLMEEERQRVAQLRKMQIESEQFR
FFEDQLRRQEMASRRDEAVPKVPEQTDGSCLSQTPRNHVRLDPNRNKPAAPTPKPAATLA
AVQSQRVEGLRRVLIPRDLTYRFLLLADSNTARGIETCGVLCGKLTHNEFVLTHVIVPKQ
SAGPDYCDMENVEELFSFQDHHNLLTLGWIHTHPTQTAFLSSVDLHTHSSYQLMLPEAIA
IVCAPKHNDTGVFRLTSAGMGEVAGCRLKGFHPHSKDPPLFTICKHIVVKDSKTTVLDLR
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggaccagggcttcagtttcagcacactgaagaagttagcggctgagccggatcacact
gacgtcactctgccggcagtggagcgtgtacgggccctcagtaaaatgggctataacatt
gaaataaatgaagacatcgccccgagacgctactttcgctctggtgtggagatggagcgt
atggcagctgtttatctagaggagggcagtctggagaatgcctttgtcctctacaataag
ttcatcactttatttgttgagaaactccccagtcacagggactatcagcagtgcaacgtc
cctgagaagcaagtgataatgaagaaattacaggaggttgcttttccacgaaaggaccaa
ttgaagagacttctccatgagaaatacagcaaagaacacagtgaatatctgaagagtcag
actcaagccatggctgttgacacgtgtggtgaacggctgcagaagatgtctttgatggag
gaggaacggcaacgtgtggcacagctcaggaagatgcaaatcgagtccgaacagtttcgc
ttcttcgaggaccaactgcgtagacaggagatggccagtcgcagggatgaggctgtcccc
aaagtgcctgaacaaaccgatgggtcctgcttatcccagaccccgagaaaccatgtacgc
cttgaccccaatcgtaacaaaccagcggcccccacccccaaaccagcagccaccttagca
gctgtacagagtcagcgtgtggaaggcctgaggcgggttttaatcccacgagacctgact
tacaggttccttttgctggctgacagcaacacggcgagaggaattgagacatgtggtgtt
ctctgtggaaaactgacgcacaatgagtttgtgctgacccatgtgatcgtccccaagcag
tccgccggtcctgactactgtgacatggagaacgtggaagagctgttcagtttccaggac
catcataacctcctgaccttgggctggatccatacacacccgacacagacggccttcctc
tccagcgtggatctacacacacacagctcttatcagctcatgctgcctgaggccatcgct
attgtttgcgcacctaaacataatgacacgggagtgttccgactaaccagtgctggaatg
ggagaagtggccggatgcagattgaaaggttttcacccccactctaaagacccccctctg
ttcactatttgcaagcacattgtggtgaaagactcgaaaacgacagttctggatctcagg
tga
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